RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 OR5AN1Q8NGI8 311 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 OR2A1Q8NGT9 310 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 ZNF502Q8TBZ5 544 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 OR51E1Q8TCB6 317 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 WBP2Q969T9 261 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 C11orf52Q96A22 123 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 GALMQ96C23 342 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 NUS1Q96E22 293 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 SMIM10Q96HG1 83 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 TIMM29Q9BSF4 260 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 FAM103A1Q9BTL3 118 aaKnown RBP4.08□□□□□ -1.76
SF3B1-207ENST00000468925 SSBP3Q9BWW4 388 aaPredicted RBP4.08□□□□□ -1.76
SF3B1-207ENST00000468925 MAP1LC3CQ9BXW4 147 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 R3HDMLQ9H3Y0 253 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 HES4Q9HCC6 221 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 NPVFQ9HCQ7 196 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 SCRT2Q9NQ03 307 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 LIN7CQ9NUP9 197 aaKnown RBP4.08□□□□□ -1.76
SF3B1-207ENST00000468925 PSENENQ9NZ42 101 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 PILRBQ9UKJ0 227 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 TNFRSF18Q9Y5U5 241 aa4.08□□□□□ -1.76
SF3B1-207ENST00000468925 VWA8A3KMH1 1905 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 VCANP13611 3396 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 TRAV8-6A0A0B4J262 113 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 MUC21A0A0G2JKD1 596 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 TRBV7-9A0A0J9YWB2 115 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 MUC21A0A140T8X8 626 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 A0A1W2PPV4 95 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 A0A1W2PQD3 144 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 MED19A0JLT2 244 aaPredicted RBP4.07□□□□□ -1.76
SF3B1-207ENST00000468925 ODAMA1E959 279 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 TMEM213A2RRL7 107 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 IZUMO1RA6ND01 250 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 C17orf51A8MQB3 221 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 F5H5K5 113 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 G3V3Y1 287 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 PLPP3O14495 311 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 ISLRO14498 428 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 SH2D1BO14796 132 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 PAGE4O60829 102 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 SAP30O75446 220 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 OR2J3O76001 311 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 MPZL1O95297 269 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 CER1O95813 267 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 SERPINE2P07093 398 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 ADH4P08319 380 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 CT45A10P0DMU9 189 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 PGCP20142 388 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 CBLN1P23435 193 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 FKBP2P26885 142 aaKnown RBP4.07□□□□□ -1.76
SF3B1-207ENST00000468925 PTGDSP41222 190 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 IER3P46695 156 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 EMDP50402 254 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 FABP6P51161 128 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 MFAP4P55083 255 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 PAX9P55771 341 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 DUSP2Q05923 314 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 AESQ08117 197 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 SLC38A11Q08AI6 406 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 KLRD1Q13241 179 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 CDSNQ15517 529 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 KISS1Q15726 138 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 IGFBP7Q16270 282 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 VWC2Q2TAL6 325 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 ZNF585BQ52M93 769 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 MUC21Q5SSG8 566 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 PLCXD3Q63HM9 321 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 ACSM6Q6P461 480 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 TMEM136Q6ZRR5 245 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 S100A7AQ86SG5 101 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 PLXDC1Q8IUK5 500 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 RPP25LQ8N5L8 163 aaKnown RBP4.07□□□□□ -1.76
SF3B1-207ENST00000468925 METTL27Q8N6F8 245 aaPredicted RBP4.07□□□□□ -1.76
SF3B1-207ENST00000468925 TMEM251Q8N6I4 163 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 OR4C3Q8NH37 302 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 OR4A5Q8NH83 315 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 OR9G1Q8NH87 305 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 LMX1AQ8TE12 382 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 APOBEC3DQ96AK3 386 aaPredicted RBP4.07□□□□□ -1.76
SF3B1-207ENST00000468925 SARAFQ96BY9 339 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 MBD6Q96DN6 1003 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 TM4SF19Q96DZ7 209 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 ADAT3Q96EY9 351 aaPredicted RBP4.07□□□□□ -1.76
SF3B1-207ENST00000468925 HARBI1Q96MB7 349 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 PAAF1Q9BRP4 392 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 GGTLC1Q9BX51 225 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 TMEM126AQ9H061 195 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 GTSF1LQ9H1H1 148 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 CENPMQ9NSP4 180 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 TMEM140Q9NV12 185 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 ALKBH4Q9NXW9 302 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 RNF181Q9P0P0 153 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 KCNS2Q9ULS6 477 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 PPIAL4AQ9Y536 164 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 SPCS1Q9Y6A9 102 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 NUMA1Q14980 2115 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 FANCMQ8IYD8 2048 aa4.07□□□□□ -1.76
SF3B1-207ENST00000468925 HEATR5BQ9P2D3 2071 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 A0A087WV48 116 aa4.06□□□□□ -1.76
SF3B1-207ENST00000468925 TEX50A0A1B0GTY4 177 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms