RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 H7C2Y5 167 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 J3QL48 77 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 UPK2O00526 184 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 RBMXL2O75526 392 aaKnown RBP6.22□□□□□ -1.41
COL6A3-208ENST00000468792 C1QL1O75973 258 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 PLAUP00749 431 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 APOA2P02652 100 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 IGHV1-8P0DP01 117 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 IL3RAP26951 378 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 MC5RP33032 325 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 RAB13P51153 203 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 LINC00205P59089 165 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 OR2B8PP59922 312 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 RAB11AP62491 216 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 DLK1P80370 383 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 RUNX1Q01196 453 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 AKR1C1Q04828 323 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 BTN1A1Q13410 526 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 GUCA2BQ16661 112 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 C4orf17Q53FE4 359 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 OR4A47Q6IF82 309 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 ATRAIDQ6UW56 229 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 LYPD2Q6UXB3 125 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 ZNF841Q6ZN19 808 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 C11orf42Q8N5U0 333 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 LY6G5BQ8NDX9 201 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 BEND2Q8NDZ0 799 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 CLDND2Q8NHS1 167 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 VSTM2AQ8TAG5 236 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 NEIL1Q96FI4 390 aaPredicted RBP6.22□□□□□ -1.41
COL6A3-208ENST00000468792 P2RX4Q99571 388 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 ZFAND3Q9H8U3 227 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 KCNIP2Q9NS61 270 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 RPRMQ9NS64 109 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 SLC35D1Q9NTN3 355 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 MIOXQ9UGB7 285 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 TCF19Q9Y242 345 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 WDR83OSQ9Y284 106 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 FAM96BQ9Y3D0 163 aa6.22□□□□□ -1.41
COL6A3-208ENST00000468792 HCFC1P51610 2035 aa6.21□□□□□ -1.41
COL6A3-208ENST00000468792 hCG_1809904A0A1W2PP81 198 aa6.21□□□□□ -1.42
COL6A3-208ENST00000468792 A0A1W2PPE2 198 aa6.21□□□□□ -1.42
COL6A3-208ENST00000468792 A0A1W2PR64 198 aa6.21□□□□□ -1.42
COL6A3-208ENST00000468792 A0A1W2PRV1 198 aa6.21□□□□□ -1.42
COL6A3-208ENST00000468792 H0YJW9 148 aa6.21□□□□□ -1.42
COL6A3-208ENST00000468792 DLL1O00548 723 aa6.21□□□□□ -1.42
COL6A3-208ENST00000468792 AGPAT2O15120 278 aa6.21□□□□□ -1.42
COL6A3-208ENST00000468792 KBTBD11O94819 623 aa6.21□□□□□ -1.42
COL6A3-208ENST00000468792 GRNP28799 593 aaKnown RBP6.21□□□□□ -1.42
COL6A3-208ENST00000468792 CD1BP29016 333 aa6.21□□□□□ -1.42
COL6A3-208ENST00000468792 LGALS7P47929 136 aa6.21□□□□□ -1.42
COL6A3-208ENST00000468792 PRCDQ00LT1 54 aa6.21□□□□□ -1.42
COL6A3-208ENST00000468792 BSXQ3C1V8 233 aa6.21□□□□□ -1.42
COL6A3-208ENST00000468792 UTF1Q5T230 341 aa6.21□□□□□ -1.42
COL6A3-208ENST00000468792 CLRN3Q8NCR9 226 aa6.21□□□□□ -1.42
COL6A3-208ENST00000468792 OR4C13Q8NGP0 309 aa6.21□□□□□ -1.42
COL6A3-208ENST00000468792 OR13D1Q8NGV5 346 aa6.21□□□□□ -1.42
COL6A3-208ENST00000468792 SFT2D1Q8WV19 159 aa6.21□□□□□ -1.42
COL6A3-208ENST00000468792 RAB1CQ92928 201 aa6.21□□□□□ -1.42
COL6A3-208ENST00000468792 LEAP2Q969E1 77 aa6.21□□□□□ -1.42
COL6A3-208ENST00000468792 RNF5Q99942 180 aa6.21□□□□□ -1.42
COL6A3-208ENST00000468792 NABP2Q9BQ15 211 aa6.21□□□□□ -1.42
COL6A3-208ENST00000468792 RSG1Q9BU20 258 aa6.21□□□□□ -1.42
COL6A3-208ENST00000468792 NPCDR1Q9BY65 106 aa6.21□□□□□ -1.42
COL6A3-208ENST00000468792 EIF5A2Q9GZV4 153 aaKnown RBP6.21□□□□□ -1.42
COL6A3-208ENST00000468792 MS4A7Q9GZW8 240 aaPredicted RBP6.21□□□□□ -1.42
COL6A3-208ENST00000468792 TMEM133Q9H2Q1 129 aa6.21□□□□□ -1.42
COL6A3-208ENST00000468792 HEYLQ9NQ87 328 aaPredicted RBP6.21□□□□□ -1.42
COL6A3-208ENST00000468792 PKDREJQ9NTG1 2253 aa6.21□□□□□ -1.42
COL6A3-208ENST00000468792 ATRXP46100 2492 aa6.21□□□□□ -1.42
COL6A3-208ENST00000468792 CTXND1A0A1B0GTU2 59 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 UBE2L5PA0A1B0GUS4 154 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 MEX3AA1L020 520 aaKnown RBP6.2□□□□□ -1.42
COL6A3-208ENST00000468792 SEC14L6B5MCN3 397 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 IFNA1P01562 189 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 IGLV1-47P01700 117 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 CCL3L1P16619 93 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 USF1P22415 310 aaPredicted RBP6.2□□□□□ -1.42
COL6A3-208ENST00000468792 COL8A2P25067 703 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 OPRK1P41145 380 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 GNG10P50151 68 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 PPT1P50897 306 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 PRRX1P54821 245 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 CCL20P78556 96 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 RHEBQ15382 184 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 CDSNQ15517 529 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 C2orf83Q53S99 150 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 SOHLH1Q5JUK2 328 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 OR8G2PQ6IF36 304 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 RBMS3Q6XE24 437 aaKnown RBP6.2□□□□□ -1.42
COL6A3-208ENST00000468792 ETV3LQ6ZN32 361 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 C1orf122Q6ZSJ8 110 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 ABHD12Q8N2K0 398 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 RPP25LQ8N5L8 163 aaKnown RBP6.2□□□□□ -1.42
COL6A3-208ENST00000468792 Q8N7P7 452 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 ZNF709Q8N972 641 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 OR1L8Q8NGR8 309 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 OR10X1Q8NGY0 326 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 TMEM167AQ8TBQ9 72 aa6.2□□□□□ -1.42
COL6A3-208ENST00000468792 LHX4Q969G2 390 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms