RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 CHRNA7P36544 502 aa13.11□□□□□ -0.31
TSPAN4-211ENST00000468468 DMRTA1Q5VZB9 504 aa13.11□□□□□ -0.31
TSPAN4-211ENST00000468468 CST9LP1Q5W188 147 aa13.11□□□□□ -0.31
TSPAN4-211ENST00000468468 LRRC29Q8WV35 223 aa13.11□□□□□ -0.31
TSPAN4-211ENST00000468468 TMEM170AQ8WVE7 144 aa13.11□□□□□ -0.31
TSPAN4-211ENST00000468468 FUT9Q9Y231 359 aa13.11□□□□□ -0.31
TSPAN4-211ENST00000468468 TRAV17A0A0B4J275 112 aa13.1□□□□□ -0.31
TSPAN4-211ENST00000468468 GGCTO75223 188 aaKnown RBP13.1□□□□□ -0.31
TSPAN4-211ENST00000468468 PROP1O75360 226 aa13.1□□□□□ -0.31
TSPAN4-211ENST00000468468 GCH1P30793 250 aa13.1□□□□□ -0.31
TSPAN4-211ENST00000468468 SRP14P37108 136 aaKnown RBP13.1□□□□□ -0.31
TSPAN4-211ENST00000468468 MRPS11P82912 194 aaKnown RBP13.1□□□□□ -0.31
TSPAN4-211ENST00000468468 HTD2P86397 168 aa13.1□□□□□ -0.31
TSPAN4-211ENST00000468468 ZNF718Q3SXZ3 478 aa13.1□□□□□ -0.31
TSPAN4-211ENST00000468468 FAM234AQ9H0X4 552 aa13.1□□□□□ -0.31
TSPAN4-211ENST00000468468 A0A1W2PPV4 95 aa13.1□□□□□ -0.31
TSPAN4-211ENST00000468468 PRDX2P32119 198 aa13.1□□□□□ -0.31
TSPAN4-211ENST00000468468 KIR2DL2P43627 348 aaPredicted RBP13.1□□□□□ -0.31
TSPAN4-211ENST00000468468 ATP5G3P48201 142 aa13.1□□□□□ -0.31
TSPAN4-211ENST00000468468 COA6Q5JTJ3 125 aaKnown RBP13.1□□□□□ -0.31
TSPAN4-211ENST00000468468 PRAMEF5Q5TYX0 476 aa13.1□□□□□ -0.31
TSPAN4-211ENST00000468468 RNASEH2CQ8TDP1 164 aaKnown RBP13.1□□□□□ -0.31
TSPAN4-211ENST00000468468 AURKAIP1Q9NWT8 199 aaPredicted RBP13.1□□□□□ -0.31
TSPAN4-211ENST00000468468 GNG12Q9UBI6 72 aa13.1□□□□□ -0.31
TSPAN4-211ENST00000468468 GNB1P62873 340 aa13.09□□□□□ -0.31
TSPAN4-211ENST00000468468 GUSBP1Q15486 140 aa13.09□□□□□ -0.31
TSPAN4-211ENST00000468468 KCNIP4Q6PIL6 250 aa13.09□□□□□ -0.31
TSPAN4-211ENST00000468468 OR4A16Q8NH70 328 aa13.09□□□□□ -0.31
TSPAN4-211ENST00000468468 ACY3Q96HD9 319 aa13.09□□□□□ -0.31
TSPAN4-211ENST00000468468 PATZ1Q9HBE1 687 aaKnown RBP13.09□□□□□ -0.31
TSPAN4-211ENST00000468468 PDE6DO43924 150 aa13.09□□□□□ -0.31
TSPAN4-211ENST00000468468 HPRT1P00492 218 aa13.09□□□□□ -0.31
TSPAN4-211ENST00000468468 ACTL10Q5JWF8 245 aa13.09□□□□□ -0.31
TSPAN4-211ENST00000468468 TRAT1Q6PIZ9 186 aa13.09□□□□□ -0.31
TSPAN4-211ENST00000468468 M0R143 59 aa13.09□□□□□ -0.31
TSPAN4-211ENST00000468468 TEX38Q6PEX7 206 aa13.09□□□□□ -0.31
TSPAN4-211ENST00000468468 LINC01551Q86U37 167 aa13.09□□□□□ -0.31
TSPAN4-211ENST00000468468 VKORC1L1Q8N0U8 176 aa13.09□□□□□ -0.31
TSPAN4-211ENST00000468468 CISD2Q8N5K1 135 aaKnown RBP13.09□□□□□ -0.31
TSPAN4-211ENST00000468468 C9orf106Q8NAJ2 232 aa13.09□□□□□ -0.31
TSPAN4-211ENST00000468468 HEYLQ9NQ87 328 aaPredicted RBP13.09□□□□□ -0.31
TSPAN4-211ENST00000468468 M0R1X1 148 aa13.08□□□□□ -0.32
TSPAN4-211ENST00000468468 NDUFB4O95168 129 aa13.08□□□□□ -0.32
TSPAN4-211ENST00000468468 IGHV3-13P01766 116 aa13.08□□□□□ -0.32
TSPAN4-211ENST00000468468 IGHV3-7P01780 117 aa13.08□□□□□ -0.32
TSPAN4-211ENST00000468468 COTL1Q14019 142 aa13.08□□□□□ -0.32
TSPAN4-211ENST00000468468 MORN2Q502X0 79 aa13.08□□□□□ -0.32
TSPAN4-211ENST00000468468 FAM78BQ5VT40 261 aa13.08□□□□□ -0.32
TSPAN4-211ENST00000468468 IGF2-ASQ6U949 168 aa13.08□□□□□ -0.32
TSPAN4-211ENST00000468468 SDSLQ96GA7 329 aa13.08□□□□□ -0.32
TSPAN4-211ENST00000468468 DERL1Q9BUN8 251 aa13.08□□□□□ -0.32
TSPAN4-211ENST00000468468 DSPP15924 2871 aaKnown RBP13.08□□□□□ -0.32
TSPAN4-211ENST00000468468 AKAP13Q12802 2813 aa13.08□□□□□ -0.32
TSPAN4-211ENST00000468468 RRHO14718 337 aa13.08□□□□□ -0.32
TSPAN4-211ENST00000468468 TM4SF5O14894 197 aa13.08□□□□□ -0.32
TSPAN4-211ENST00000468468 TYMSP04818 313 aa13.08□□□□□ -0.32
TSPAN4-211ENST00000468468 RAB1CQ92928 201 aa13.08□□□□□ -0.32
TSPAN4-211ENST00000468468 PRSS8Q16651 343 aa13.07□□□□□ -0.32
TSPAN4-211ENST00000468468 RPL39P5Q59GN2 51 aa13.07□□□□□ -0.32
TSPAN4-211ENST00000468468 TREML4Q6UXN2 200 aa13.07□□□□□ -0.32
TSPAN4-211ENST00000468468 C1orf162Q8NEQ5 155 aaPredicted RBP13.07□□□□□ -0.32
TSPAN4-211ENST00000468468 OR2Z1Q8NG97 314 aa13.07□□□□□ -0.32
TSPAN4-211ENST00000468468 Q8TCH9 128 aa13.07□□□□□ -0.32
TSPAN4-211ENST00000468468 KCNIP2Q9NS61 270 aa13.07□□□□□ -0.32
TSPAN4-211ENST00000468468 MGAQ8IWI9 3026 aa13.07□□□□□ -0.32
TSPAN4-211ENST00000468468 PDLIM4P50479 330 aa13.07□□□□□ -0.32
TSPAN4-211ENST00000468468 TMEM249Q2WGJ8 235 aa13.07□□□□□ -0.32
TSPAN4-211ENST00000468468 AARDQ4LEZ3 155 aa13.07□□□□□ -0.32
TSPAN4-211ENST00000468468 PDLIM3Q53GG5 364 aaPredicted RBP13.07□□□□□ -0.32
TSPAN4-211ENST00000468468 TUBG2Q9NRH3 451 aa13.07□□□□□ -0.32
TSPAN4-211ENST00000468468 IGHV2OR16-5A0A0B4J2B6 119 aa13.06□□□□□ -0.32
TSPAN4-211ENST00000468468 AQP7O14520 342 aa13.06□□□□□ -0.32
TSPAN4-211ENST00000468468 MPDU1O75352 247 aa13.06□□□□□ -0.32
TSPAN4-211ENST00000468468 OPRK1P41145 380 aa13.06□□□□□ -0.32
TSPAN4-211ENST00000468468 ERVK-16P61578 105 aa13.06□□□□□ -0.32
TSPAN4-211ENST00000468468 ARSJQ5FYB0 599 aaPredicted RBP13.06□□□□□ -0.32
TSPAN4-211ENST00000468468 MS4A5Q9H3V2 200 aa13.06□□□□□ -0.32
TSPAN4-211ENST00000468468 DUSP13Q9UII6 198 aa13.06□□□□□ -0.32
TSPAN4-211ENST00000468468 JPT1Q9UK76 154 aa13.06□□□□□ -0.32
TSPAN4-211ENST00000468468 IGKV1D-17A0A075B6S4 117 aa13.06□□□□□ -0.32
TSPAN4-211ENST00000468468 TRAV3A0A0B4J244 114 aa13.06□□□□□ -0.32
TSPAN4-211ENST00000468468 IGHV1-18A0A0C4DH31 117 aa13.06□□□□□ -0.32
TSPAN4-211ENST00000468468 PGPEP1LA6NFU8 196 aa13.06□□□□□ -0.32
TSPAN4-211ENST00000468468 FAM90A9PA6NNJ1 464 aa13.06□□□□□ -0.32
TSPAN4-211ENST00000468468 F6UZH7 168 aa13.06□□□□□ -0.32
TSPAN4-211ENST00000468468 TMPRSS2O15393 492 aa13.06□□□□□ -0.32
TSPAN4-211ENST00000468468 C1QTNF9P0C862 333 aa13.06□□□□□ -0.32
TSPAN4-211ENST00000468468 IL3RAP26951 378 aa13.06□□□□□ -0.32
TSPAN4-211ENST00000468468 VDAC2P45880 294 aaPredicted RBP13.06□□□□□ -0.32
TSPAN4-211ENST00000468468 RPL29P47914 159 aaKnown RBP13.06□□□□□ -0.32
TSPAN4-211ENST00000468468 PAX5Q02548 391 aa13.06□□□□□ -0.32
TSPAN4-211ENST00000468468 MBNL2Q5VZF2 373 aaKnown RBP13.06□□□□□ -0.32
TSPAN4-211ENST00000468468 ABHD12Q8N2K0 398 aa13.06□□□□□ -0.32
TSPAN4-211ENST00000468468 SVILO95425 2214 aa13.06□□□□□ -0.32
TSPAN4-211ENST00000468468 ARL14EPLP0DKL9 152 aa13.05□□□□□ -0.32
TSPAN4-211ENST00000468468 LCN2P80188 198 aa13.05□□□□□ -0.32
TSPAN4-211ENST00000468468 MIC13Q5XKP0 118 aa13.05□□□□□ -0.32
TSPAN4-211ENST00000468468 ZNF114Q8NC26 417 aa13.05□□□□□ -0.32
TSPAN4-211ENST00000468468 WFIKKN1Q96NZ8 548 aa13.05□□□□□ -0.32
TSPAN4-211ENST00000468468 MGST2Q99735 147 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms