RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 SLC25A31Q9H0C2 315 aa16.63■□□□□ 0.25
TMEM53-207ENST00000468117 IFNA17P01571 189 aa16.63■□□□□ 0.25
TMEM53-207ENST00000468117 SAA1P0DJI8 122 aaPredicted RBP16.63■□□□□ 0.25
TMEM53-207ENST00000468117 MC5RP33032 325 aa16.63■□□□□ 0.25
TMEM53-207ENST00000468117 HTR2BP41595 481 aa16.63■□□□□ 0.25
TMEM53-207ENST00000468117 AARDQ4LEZ3 155 aa16.63■□□□□ 0.25
TMEM53-207ENST00000468117 SMIM8Q96KF7 97 aa16.63■□□□□ 0.25
TMEM53-207ENST00000468117 POLR3KQ9Y2Y1 108 aaPredicted RBP16.63■□□□□ 0.25
TMEM53-207ENST00000468117 LEUTXA8MZ59 168 aa16.62■□□□□ 0.25
TMEM53-207ENST00000468117 PLXNB1O43157 2135 aa16.62■□□□□ 0.25
TMEM53-207ENST00000468117 TXNL1O43396 289 aa16.62■□□□□ 0.25
TMEM53-207ENST00000468117 RPS16P62249 146 aaKnown RBP16.62■□□□□ 0.25
TMEM53-207ENST00000468117 STOML3Q8TAV4 291 aa16.62■□□□□ 0.25
TMEM53-207ENST00000468117 DTD1Q8TEA8 209 aa16.62■□□□□ 0.25
TMEM53-207ENST00000468117 RITA1Q96K30 269 aa16.62■□□□□ 0.25
TMEM53-207ENST00000468117 TBX15Q96SF7 602 aa16.62■□□□□ 0.25
TMEM53-207ENST00000468117 DPM3Q9P2X0 92 aa16.62■□□□□ 0.25
TMEM53-207ENST00000468117 HILPDAQ9Y5L2 63 aa16.62■□□□□ 0.25
TMEM53-207ENST00000468117 C15orf61A6NNL5 157 aa16.62■□□□□ 0.25
TMEM53-207ENST00000468117 CEBPZOSA8MTT3 80 aa16.62■□□□□ 0.25
TMEM53-207ENST00000468117 PAX6P26367 422 aa16.62■□□□□ 0.25
TMEM53-207ENST00000468117 TMEM267Q0VDI3 215 aaPredicted RBP16.62■□□□□ 0.25
TMEM53-207ENST00000468117 SPANXN5Q5MJ07 72 aa16.62■□□□□ 0.25
TMEM53-207ENST00000468117 TPTE2P1Q5T6R2 138 aa16.62■□□□□ 0.25
TMEM53-207ENST00000468117 TMEM217Q8N7C4 229 aa16.62■□□□□ 0.25
TMEM53-207ENST00000468117 PCNPQ8WW12 178 aaKnown RBP16.62■□□□□ 0.25
TMEM53-207ENST00000468117 AIFM2Q9BRQ8 373 aa16.62■□□□□ 0.25
TMEM53-207ENST00000468117 MS4A7Q9GZW8 240 aaPredicted RBP16.62■□□□□ 0.25
TMEM53-207ENST00000468117 WFDC1Q9HC57 220 aa16.62■□□□□ 0.25
TMEM53-207ENST00000468117 A0A1W2PPI3 338 aa16.61■□□□□ 0.25
TMEM53-207ENST00000468117 IL6RP08887 468 aaPredicted RBP16.61■□□□□ 0.25
TMEM53-207ENST00000468117 TPT1P13693 172 aaKnown RBP16.61■□□□□ 0.25
TMEM53-207ENST00000468117 ZNF429Q86V71 674 aa16.61■□□□□ 0.25
TMEM53-207ENST00000468117 NUP50Q9UKX7 468 aa16.61■□□□□ 0.25
TMEM53-207ENST00000468117 MYOD1P15172 320 aa16.6■□□□□ 0.25
TMEM53-207ENST00000468117 TAS2R30P59541 319 aa16.6■□□□□ 0.25
TMEM53-207ENST00000468117 BAP18Q8IXM2 172 aa16.6■□□□□ 0.25
TMEM53-207ENST00000468117 SCARB1Q8WTV0 552 aa16.6■□□□□ 0.25
TMEM53-207ENST00000468117 TMEM14BQ9NUH8 114 aa16.6■□□□□ 0.25
TMEM53-207ENST00000468117 BET1LQ9NYM9 111 aa16.6■□□□□ 0.25
TMEM53-207ENST00000468117 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.6■□□□□ 0.25
TMEM53-207ENST00000468117 UPK2O00526 184 aa16.6■□□□□ 0.25
TMEM53-207ENST00000468117 METTL15P1P0C7V9 234 aa16.6■□□□□ 0.25
TMEM53-207ENST00000468117 CEACAM3P40198 252 aa16.6■□□□□ 0.25
TMEM53-207ENST00000468117 SPCS3P61009 180 aa16.6■□□□□ 0.25
TMEM53-207ENST00000468117 CLINT1Q14677 625 aa16.6■□□□□ 0.25
TMEM53-207ENST00000468117 STX12Q86Y82 276 aa16.6■□□□□ 0.25
TMEM53-207ENST00000468117 PUSL1Q8N0Z8 303 aaKnown RBP16.6■□□□□ 0.25
TMEM53-207ENST00000468117 OR5C1Q8NGR4 320 aa16.6■□□□□ 0.25
TMEM53-207ENST00000468117 FOXA2Q9Y261 457 aaPredicted RBP16.6■□□□□ 0.25
TMEM53-207ENST00000468117 IGLV2-23P01705 113 aa16.59■□□□□ 0.25
TMEM53-207ENST00000468117 DYNLT3P51808 116 aa16.59■□□□□ 0.25
TMEM53-207ENST00000468117 BAXQ07812 192 aa16.59■□□□□ 0.25
TMEM53-207ENST00000468117 SLC7A5P1Q8MH63 180 aa16.59■□□□□ 0.25
TMEM53-207ENST00000468117 OR52E5Q8NH55 327 aa16.59■□□□□ 0.25
TMEM53-207ENST00000468117 TIMM23O14925 209 aa16.58■□□□□ 0.25
TMEM53-207ENST00000468117 KBTBD11O94819 623 aa16.58■□□□□ 0.25
TMEM53-207ENST00000468117 SLC25A16P16260 332 aa16.58■□□□□ 0.25
TMEM53-207ENST00000468117 USF1P22415 310 aaPredicted RBP16.58■□□□□ 0.25
TMEM53-207ENST00000468117 SULT1A1P50225 295 aa16.58■□□□□ 0.25
TMEM53-207ENST00000468117 DEFB113Q30KQ7 82 aa16.58■□□□□ 0.25
TMEM53-207ENST00000468117 FAM74A1Q5RGS3 127 aa16.58■□□□□ 0.25
TMEM53-207ENST00000468117 TCF19Q9Y242 345 aa16.58■□□□□ 0.25
TMEM53-207ENST00000468117 ZANQ9Y493 2812 aa16.58■□□□□ 0.24
TMEM53-207ENST00000468117 JTBO76095 146 aa16.58■□□□□ 0.24
TMEM53-207ENST00000468117 SSX2Q16385 188 aa16.58■□□□□ 0.24
TMEM53-207ENST00000468117 PDLIM3Q53GG5 364 aaPredicted RBP16.58■□□□□ 0.24
TMEM53-207ENST00000468117 C17orf50Q8WW18 174 aa16.58■□□□□ 0.24
TMEM53-207ENST00000468117 CIB3Q96Q77 187 aaPredicted RBP16.58■□□□□ 0.24
TMEM53-207ENST00000468117 BEX4Q9NWD9 120 aaPredicted RBP16.58■□□□□ 0.24
TMEM53-207ENST00000468117 PRNDQ9UKY0 176 aa16.58■□□□□ 0.24
TMEM53-207ENST00000468117 OR51B2Q9Y5P1 312 aa16.58■□□□□ 0.24
TMEM53-207ENST00000468117 OPN1MWP04001 364 aa16.57■□□□□ 0.24
TMEM53-207ENST00000468117 OPN1MW2P0DN77 364 aa16.57■□□□□ 0.24
TMEM53-207ENST00000468117 OPN1MW3P0DN78 364 aa16.57■□□□□ 0.24
TMEM53-207ENST00000468117 LGALS4P56470 323 aa16.57■□□□□ 0.24
TMEM53-207ENST00000468117 PAX8Q06710 450 aa16.57■□□□□ 0.24
TMEM53-207ENST00000468117 PHYHIPLQ96FC7 376 aa16.57■□□□□ 0.24
TMEM53-207ENST00000468117 OR4C12Q96R67 309 aa16.57■□□□□ 0.24
TMEM53-207ENST00000468117 SLC25A17O43808 307 aa16.57■□□□□ 0.24
TMEM53-207ENST00000468117 CNTFRP26992 372 aa16.57■□□□□ 0.24
TMEM53-207ENST00000468117 UBE2E1P51965 193 aa16.57■□□□□ 0.24
TMEM53-207ENST00000468117 HSPE1P61604 102 aaKnown RBP16.57■□□□□ 0.24
TMEM53-207ENST00000468117 UBAC2Q8NBM4 344 aa16.57■□□□□ 0.24
TMEM53-207ENST00000468117 TMED6Q8WW62 240 aa16.57■□□□□ 0.24
TMEM53-207ENST00000468117 RPS10-NUDT3A0A1W2PQS6 291 aa16.56■□□□□ 0.24
TMEM53-207ENST00000468117 LGALS7P47929 136 aa16.56■□□□□ 0.24
TMEM53-207ENST00000468117 ARL16Q0P5N6 197 aa16.56■□□□□ 0.24
TMEM53-207ENST00000468117 TMEM14EPQ6UXP3 125 aa16.56■□□□□ 0.24
TMEM53-207ENST00000468117 HAPLN4Q86UW8 402 aa16.56■□□□□ 0.24
TMEM53-207ENST00000468117 DYNAPQ8N1N2 210 aa16.56■□□□□ 0.24
TMEM53-207ENST00000468117 VSTM2AQ8TAG5 236 aa16.56■□□□□ 0.24
TMEM53-207ENST00000468117 HINT2Q9BX68 163 aa16.56■□□□□ 0.24
TMEM53-207ENST00000468117 ZFHX3Q15911 3703 aa16.56■□□□□ 0.24
TMEM53-207ENST00000468117 OR1S2Q8NGQ3 325 aa16.55■□□□□ 0.24
TMEM53-207ENST00000468117 CFHR4Q92496 578 aa16.55■□□□□ 0.24
TMEM53-207ENST00000468117 HEYLQ9NQ87 328 aaPredicted RBP16.55■□□□□ 0.24
TMEM53-207ENST00000468117 TPSG1Q9NRR2 321 aa16.55■□□□□ 0.24
TMEM53-207ENST00000468117 CACFD1Q9UGQ2 172 aa16.55■□□□□ 0.24
TMEM53-207ENST00000468117 STRAPQ9Y3F4 350 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms