RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 TMEM41BQ5BJD5 291 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 ACSM6Q6P461 480 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 RPP25LQ8N5L8 163 aaKnown RBP9.41□□□□□ -0.9
HPS1-208ENST00000467246 ZNF439Q8NDP4 499 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 OR4A16Q8NH70 328 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 FAM216AQ8WUB2 273 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 MBD3L1Q8WWY6 194 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 RND1Q92730 232 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 TMEM147Q9BVK8 224 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 EGLN1Q9GZT9 426 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 NBASA2RRP1 2371 aa9.41□□□□□ -0.9
HPS1-208ENST00000467246 ITGB1BP1O14713 200 aa9.4□□□□□ -0.9
HPS1-208ENST00000467246 FCN3O75636 299 aa9.4□□□□□ -0.9
HPS1-208ENST00000467246 MRPS11P82912 194 aaKnown RBP9.4□□□□□ -0.9
HPS1-208ENST00000467246 PINX1Q96BK5 328 aaKnown RBP9.4□□□□□ -0.9
HPS1-208ENST00000467246 ATG101Q9BSB4 218 aa9.4□□□□□ -0.9
HPS1-208ENST00000467246 TMEM140Q9NV12 185 aa9.4□□□□□ -0.9
HPS1-208ENST00000467246 IDI2-AS1Q9NZ38 188 aa9.4□□□□□ -0.9
HPS1-208ENST00000467246 MSRB2Q9Y3D2 182 aa9.4□□□□□ -0.9
HPS1-208ENST00000467246 TANC2Q9HCD6 1990 aa9.4□□□□□ -0.9
HPS1-208ENST00000467246 ATRXP46100 2492 aa9.4□□□□□ -0.91
HPS1-208ENST00000467246 LOC102723971A0A1B0GUV8 181 aa9.4□□□□□ -0.91
HPS1-208ENST00000467246 HMGB3O15347 200 aaKnown RBP9.4□□□□□ -0.91
HPS1-208ENST00000467246 HSPB1P04792 205 aaKnown RBP9.4□□□□□ -0.91
HPS1-208ENST00000467246 SNRPCP09234 159 aaKnown RBP9.4□□□□□ -0.91
HPS1-208ENST00000467246 FGF7P21781 194 aa9.4□□□□□ -0.91
HPS1-208ENST00000467246 RELBQ01201 579 aa9.4□□□□□ -0.91
HPS1-208ENST00000467246 ATP6V1FQ16864 119 aa9.4□□□□□ -0.91
HPS1-208ENST00000467246 AARDQ4LEZ3 155 aa9.4□□□□□ -0.91
HPS1-208ENST00000467246 KDF1Q8NAX2 398 aaPredicted RBP9.4□□□□□ -0.91
HPS1-208ENST00000467246 CCL17Q92583 94 aa9.4□□□□□ -0.91
HPS1-208ENST00000467246 TMPRSS5Q9H3S3 457 aa9.4□□□□□ -0.91
HPS1-208ENST00000467246 SAP30LQ9HAJ7 183 aa9.4□□□□□ -0.91
HPS1-208ENST00000467246 DOK5Q9P104 306 aa9.4□□□□□ -0.91
HPS1-208ENST00000467246 GAB2Q9UQC2 676 aa9.4□□□□□ -0.91
HPS1-208ENST00000467246 CHD8Q9HCK8 2581 aa9.39□□□□□ -0.91
HPS1-208ENST00000467246 TRGV8A0A0C4DH27 118 aa9.39□□□□□ -0.91
HPS1-208ENST00000467246 H3BQ15 152 aa9.39□□□□□ -0.91
HPS1-208ENST00000467246 ERVK-16P61578 105 aa9.39□□□□□ -0.91
HPS1-208ENST00000467246 GNB2P62879 340 aa9.39□□□□□ -0.91
HPS1-208ENST00000467246 KHDC3LQ587J8 217 aa9.39□□□□□ -0.91
HPS1-208ENST00000467246 CENPVQ7Z7K6 275 aaPredicted RBP9.39□□□□□ -0.91
HPS1-208ENST00000467246 CORO2AQ92828 525 aa9.39□□□□□ -0.91
HPS1-208ENST00000467246 DIRC2Q96SL1 478 aa9.39□□□□□ -0.91
HPS1-208ENST00000467246 PRDM13Q9H4Q3 707 aa9.39□□□□□ -0.91
HPS1-208ENST00000467246 LINC00574Q9H8X3 128 aa9.39□□□□□ -0.91
HPS1-208ENST00000467246 RAB9BQ9NP90 201 aa9.39□□□□□ -0.91
HPS1-208ENST00000467246 MAP1LC3B2A6NCE7 125 aa9.39□□□□□ -0.91
HPS1-208ENST00000467246 SPCS3P61009 180 aa9.39□□□□□ -0.91
HPS1-208ENST00000467246 RBPJQ06330 500 aa9.39□□□□□ -0.91
HPS1-208ENST00000467246 OR4S2Q8NH73 311 aa9.39□□□□□ -0.91
HPS1-208ENST00000467246 MISP3Q96FF7 219 aa9.39□□□□□ -0.91
HPS1-208ENST00000467246 MAP1LC3BQ9GZQ8 125 aa9.39□□□□□ -0.91
HPS1-208ENST00000467246 SLC25A10Q9UBX3 287 aaPredicted RBP9.39□□□□□ -0.91
HPS1-208ENST00000467246 TIMM9Q9Y5J7 89 aa9.39□□□□□ -0.91
HPS1-208ENST00000467246 DMRT1Q9Y5R6 373 aa9.39□□□□□ -0.91
HPS1-208ENST00000467246 FAM90A9PA6NNJ1 464 aa9.38□□□□□ -0.91
HPS1-208ENST00000467246 SHISA9B4DS77 424 aa9.38□□□□□ -0.91
HPS1-208ENST00000467246 E7EQL1 145 aa9.38□□□□□ -0.91
HPS1-208ENST00000467246 RRHO14718 337 aa9.38□□□□□ -0.91
HPS1-208ENST00000467246 SOD3P08294 240 aa9.38□□□□□ -0.91
HPS1-208ENST00000467246 CXCL1P09341 107 aa9.38□□□□□ -0.91
HPS1-208ENST00000467246 RHEBQ15382 184 aa9.38□□□□□ -0.91
HPS1-208ENST00000467246 ZNF674Q2M3X9 581 aa9.38□□□□□ -0.91
HPS1-208ENST00000467246 VWC2Q2TAL6 325 aa9.38□□□□□ -0.91
HPS1-208ENST00000467246 ZNF429Q86V71 674 aa9.38□□□□□ -0.91
HPS1-208ENST00000467246 ZCCHC14Q8WYQ9 949 aaKnown RBP9.38□□□□□ -0.91
HPS1-208ENST00000467246 RNASE6Q93091 150 aaKnown RBP9.38□□□□□ -0.91
HPS1-208ENST00000467246 NPCDR1Q9BY65 106 aa9.38□□□□□ -0.91
HPS1-208ENST00000467246 HEYLQ9NQ87 328 aaPredicted RBP9.38□□□□□ -0.91
HPS1-208ENST00000467246 RPUSD1Q9UJJ7 312 aaKnown RBP9.38□□□□□ -0.91
HPS1-208ENST00000467246 RAXQ9Y2V3 346 aa9.38□□□□□ -0.91
HPS1-208ENST00000467246 TRAV38-1A0A0B4J264 116 aa9.38□□□□□ -0.91
HPS1-208ENST00000467246 hADV38S2A0JD32 116 aa9.38□□□□□ -0.91
HPS1-208ENST00000467246 TMEM178BH3BS89 294 aa9.38□□□□□ -0.91
HPS1-208ENST00000467246 OR2C1O95371 312 aa9.38□□□□□ -0.91
HPS1-208ENST00000467246 IFNA10P01566 189 aa9.38□□□□□ -0.91
HPS1-208ENST00000467246 BCL2P10415 239 aa9.38□□□□□ -0.91
HPS1-208ENST00000467246 DEFA4P12838 97 aa9.38□□□□□ -0.91
HPS1-208ENST00000467246 FABP4P15090 132 aa9.38□□□□□ -0.91
HPS1-208ENST00000467246 CCL3L1P16619 93 aa9.38□□□□□ -0.91
HPS1-208ENST00000467246 KIR2DS2P43631 304 aa9.38□□□□□ -0.91
HPS1-208ENST00000467246 VDAC2P45880 294 aaPredicted RBP9.38□□□□□ -0.91
HPS1-208ENST00000467246 ABHD12Q8N2K0 398 aa9.38□□□□□ -0.91
HPS1-208ENST00000467246 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.38□□□□□ -0.91
HPS1-208ENST00000467246 RAB39BQ96DA2 213 aa9.38□□□□□ -0.91
HPS1-208ENST00000467246 VKORC1Q9BQB6 163 aa9.38□□□□□ -0.91
HPS1-208ENST00000467246 SLC39A9Q9NUM3 307 aa9.38□□□□□ -0.91
HPS1-208ENST00000467246 TET2Q6N021 2002 aaPredicted RBP9.38□□□□□ -0.91
HPS1-208ENST00000467246 PPIAL4EA0A075B759 164 aa9.37□□□□□ -0.91
HPS1-208ENST00000467246 TGIF2-C20orf24A0A0A6YYL0 155 aa9.37□□□□□ -0.91
HPS1-208ENST00000467246 NKX6-3A6NJ46 265 aa9.37□□□□□ -0.91
HPS1-208ENST00000467246 PPIAL4DF5H284 164 aa9.37□□□□□ -0.91
HPS1-208ENST00000467246 PPIAL4FP0DN26 164 aa9.37□□□□□ -0.91
HPS1-208ENST00000467246 THBS3P49746 956 aa9.37□□□□□ -0.91
HPS1-208ENST00000467246 TMPRSS3P57727 454 aa9.37□□□□□ -0.91
HPS1-208ENST00000467246 RAB11AP62491 216 aa9.37□□□□□ -0.91
HPS1-208ENST00000467246 RPL31P62899 125 aaKnown RBP9.37□□□□□ -0.91
HPS1-208ENST00000467246 OR4A47Q6IF82 309 aa9.37□□□□□ -0.91
HPS1-208ENST00000467246 LYPD2Q6UXB3 125 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms