RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 AKAIN1P0CW23 69 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 ATF1P18846 271 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 EVI2AP22794 236 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 NTSP30990 170 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 BTCP35070 178 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 HRH1P35367 487 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 BDKRB1P46663 353 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 GPM6AP51674 278 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 TAS2R20P59543 309 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 RPS23P62266 143 aaKnown RBP2.54□□□□□ -2
VPS13D-203ENST00000466732 RPS25P62851 125 aaKnown RBP2.54□□□□□ -2
VPS13D-203ENST00000466732 PSG4Q00888 419 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 BCL2L1Q07817 233 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 PRR4Q16378 134 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 HIST3H3Q16695 136 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 LRRC75BQ2VPJ9 315 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 UFSP1Q6NVU6 142 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 CNIH2Q6PI25 160 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 FOXI2Q6ZQN5 318 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 ACOT1Q86TX2 421 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 ZNF429Q86V71 674 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 BLIDQ8IZY5 108 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 OSR2Q8N2R0 312 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 OR5AU1Q8NGC0 362 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 OR6K2Q8NGY2 324 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 OR2G3Q8NGZ4 309 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 ZNRF2Q8NHG8 242 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 NEIL3Q8TAT5 605 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 ZNF675Q8TD23 568 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 BAALCQ8WXS3 180 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 PP6455Q8WZ26 134 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 FRZBQ92765 325 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 POP5Q969H6 163 aaKnown RBP2.54□□□□□ -2
VPS13D-203ENST00000466732 SLC25A46Q96AG3 418 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 ELSPBP1Q96BH3 223 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 ADTRPQ96IZ2 230 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 OR4K3Q96R72 315 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 IMMP2LQ96T52 175 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 GPER1Q99527 375 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 EBPLQ9BY08 206 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 FXYD6Q9H0Q3 95 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 OR51I1Q9H343 314 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 MAP1LC3AQ9H492 121 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 BANF2Q9H503 90 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 RDH14Q9HBH5 336 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 GPR84Q9NQS5 396 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 SPANXB1Q9NS25 103 aaPredicted RBP2.54□□□□□ -2
VPS13D-203ENST00000466732 TXNL4BQ9NX01 149 aaKnown RBP2.54□□□□□ -2
VPS13D-203ENST00000466732 LHX3Q9UBR4 397 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 SHPKQ9UHJ6 478 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 FUT9Q9Y231 359 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 CYSLTR1Q9Y271 337 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 DOCK3Q8IZD9 2030 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 KIF26AQ9ULI4 1882 aaPredicted RBP2.54□□□□□ -2
VPS13D-203ENST00000466732 BTAF1O14981 1849 aa2.54□□□□□ -2
VPS13D-203ENST00000466732 SCN7AQ01118 1682 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 MEGF6O75095 1541 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 NINQ8N4C6 2090 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 PIKFYVEQ9Y2I7 2098 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 MIA3Q5JRA6 1907 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 hADV38S2A0JD32 116 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 IGLC7A0M8Q6 106 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 NAP1L6A6NFF2 107 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 F5H5P2 479 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 H7C1C5 153 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 J3KT08 172 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 ZNF593O00488 134 aaPredicted RBP2.53□□□□□ -2
VPS13D-203ENST00000466732 PIRO00625 290 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 TAX1BP3O14907 124 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 ENSAO43768 121 aaKnown RBP2.53□□□□□ -2
VPS13D-203ENST00000466732 CREBL2O60519 120 aaPredicted RBP2.53□□□□□ -2
VPS13D-203ENST00000466732 EEDO75530 441 aaKnown RBP2.53□□□□□ -2
VPS13D-203ENST00000466732 OR7C1O76099 320 aaPredicted RBP2.53□□□□□ -2
VPS13D-203ENST00000466732 SOX14O95416 240 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 MOSP00540 346 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 APOA2P02652 100 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 TRGC2P03986 189 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 GAPDHP04406 335 aaKnown RBP2.53□□□□□ -2
VPS13D-203ENST00000466732 HLA-DQB2P05538 268 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 HPNP05981 417 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 CRYGDP07320 174 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 CT45A6P0DMU7 189 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 CT45A5P0DMU8 189 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 CT45A7P0DMV0 189 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 SLC25A4P12235 298 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 BCKDHAP12694 445 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 CTSEP14091 401 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 ZNF32P17041 273 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 CSRP1P21291 193 aaKnown RBP2.53□□□□□ -2
VPS13D-203ENST00000466732 MDKP21741 143 aaPredicted RBP2.53□□□□□ -2
VPS13D-203ENST00000466732 PRTN3P24158 256 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 CD34P28906 385 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 GRPRP30550 384 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 SRIP30626 198 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 GLRXP35754 106 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 GUCA1AP43080 201 aaPredicted RBP2.53□□□□□ -2
VPS13D-203ENST00000466732 GPR1P46091 355 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 GYG1P46976 350 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 CCL11P51671 97 aa2.53□□□□□ -2
VPS13D-203ENST00000466732 STC1P52823 247 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms