RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 C19orf35Q6ZS72 473 aa14.5□□□□□ -0.09
COL9A3-206ENST00000466532 TMEM167AQ8TBQ9 72 aa14.5□□□□□ -0.09
COL9A3-206ENST00000466532 DYNLRB2Q8TF09 96 aa14.5□□□□□ -0.09
COL9A3-206ENST00000466532 FYTTD1Q96QD9 318 aaKnown RBP14.5□□□□□ -0.09
COL9A3-206ENST00000466532 PLEKHA3Q9HB20 300 aa14.5□□□□□ -0.09
COL9A3-206ENST00000466532 TAS2R8Q9NYW2 309 aa14.5□□□□□ -0.09
COL9A3-206ENST00000466532 SSR3Q9UNL2 185 aa14.5□□□□□ -0.09
COL9A3-206ENST00000466532 E7EUB6 86 aa14.49□□□□□ -0.09
COL9A3-206ENST00000466532 SFXN4Q6P4A7 337 aa14.49□□□□□ -0.09
COL9A3-206ENST00000466532 LAX1Q8IWV1 398 aa14.49□□□□□ -0.09
COL9A3-206ENST00000466532 PUSL1Q8N0Z8 303 aaKnown RBP14.49□□□□□ -0.09
COL9A3-206ENST00000466532 MFSD4AQ8N468 514 aa14.49□□□□□ -0.09
COL9A3-206ENST00000466532 FCGR1BQ92637 280 aa14.49□□□□□ -0.09
COL9A3-206ENST00000466532 NEURL2Q9BR09 285 aa14.49□□□□□ -0.09
COL9A3-206ENST00000466532 RHBDL2Q9NX52 303 aa14.49□□□□□ -0.09
COL9A3-206ENST00000466532 FBXL7Q9UJT9 491 aa14.49□□□□□ -0.09
COL9A3-206ENST00000466532 DMRT1Q9Y5R6 373 aa14.49□□□□□ -0.09
COL9A3-206ENST00000466532 NPIPB5A8MRT5 1133 aa14.48□□□□□ -0.09
COL9A3-206ENST00000466532 TPPPO94811 219 aa14.48□□□□□ -0.09
COL9A3-206ENST00000466532 HLA-AP01891 365 aaKnown RBP14.48□□□□□ -0.09
COL9A3-206ENST00000466532 IL6RP08887 468 aaPredicted RBP14.48□□□□□ -0.09
COL9A3-206ENST00000466532 MAS1LP35410 378 aa14.48□□□□□ -0.09
COL9A3-206ENST00000466532 BRWD1-AS2P59051 145 aa14.48□□□□□ -0.09
COL9A3-206ENST00000466532 ZNF66Q6ZN08 573 aa14.48□□□□□ -0.09
COL9A3-206ENST00000466532 GPHA2Q96T91 129 aa14.48□□□□□ -0.09
COL9A3-206ENST00000466532 SLC2A8Q9NY64 477 aa14.48□□□□□ -0.09
COL9A3-206ENST00000466532 CEPT1Q9Y6K0 416 aa14.48□□□□□ -0.09
COL9A3-206ENST00000466532 C2orf70A6NJV1 201 aa14.47□□□□□ -0.09
COL9A3-206ENST00000466532 ZNF785A8K8V0 405 aa14.47□□□□□ -0.09
COL9A3-206ENST00000466532 GGCTO75223 188 aaKnown RBP14.47□□□□□ -0.09
COL9A3-206ENST00000466532 OR2C1O95371 312 aa14.47□□□□□ -0.09
COL9A3-206ENST00000466532 ZNF735P0CB33 412 aa14.47□□□□□ -0.09
COL9A3-206ENST00000466532 EDN2P20800 178 aa14.47□□□□□ -0.09
COL9A3-206ENST00000466532 ARPC4P59998 168 aa14.47□□□□□ -0.09
COL9A3-206ENST00000466532 DEFB114Q30KQ6 69 aa14.47□□□□□ -0.09
COL9A3-206ENST00000466532 SSX9Q7RTT3 188 aa14.47□□□□□ -0.09
COL9A3-206ENST00000466532 BEST4Q8NFU0 473 aa14.47□□□□□ -0.09
COL9A3-206ENST00000466532 RETNQ9HD89 108 aa14.47□□□□□ -0.09
COL9A3-206ENST00000466532 SLC2A9Q9NRM0 540 aa14.47□□□□□ -0.09
COL9A3-206ENST00000466532 DNAH1Q9P2D7 4330 aa14.47□□□□□ -0.09
COL9A3-206ENST00000466532 A0A1B0GW64 132 aa14.46□□□□□ -0.09
COL9A3-206ENST00000466532 TNFSF12O43508 249 aa14.46□□□□□ -0.09
COL9A3-206ENST00000466532 NDUFB8O95169 186 aa14.46□□□□□ -0.09
COL9A3-206ENST00000466532 HRASP01112 189 aa14.46□□□□□ -0.09
COL9A3-206ENST00000466532 IGHV3-23P01764 117 aa14.46□□□□□ -0.09
COL9A3-206ENST00000466532 CD7P09564 240 aa14.46□□□□□ -0.09
COL9A3-206ENST00000466532 FOLR2P14207 255 aa14.46□□□□□ -0.09
COL9A3-206ENST00000466532 AREGP15514 252 aa14.46□□□□□ -0.09
COL9A3-206ENST00000466532 SDC2P34741 201 aa14.46□□□□□ -0.09
COL9A3-206ENST00000466532 KIR2DS2P43631 304 aa14.46□□□□□ -0.09
COL9A3-206ENST00000466532 MXD1Q05195 221 aa14.46□□□□□ -0.09
COL9A3-206ENST00000466532 GUCA2BQ16661 112 aa14.46□□□□□ -0.09
COL9A3-206ENST00000466532 LINC00322Q6ZN03 302 aaPredicted RBP14.46□□□□□ -0.09
COL9A3-206ENST00000466532 SECTM1Q8WVN6 248 aa14.46□□□□□ -0.09
COL9A3-206ENST00000466532 CCL28Q9NRJ3 127 aa14.46□□□□□ -0.09
COL9A3-206ENST00000466532 S4R3C0 116 aa14.46□□□□□ -0.09
COL9A3-206ENST00000466532 TRAV18A0A075B6X5 111 aa14.45□□□□□ -0.1
COL9A3-206ENST00000466532 LGALS9O00182 355 aa14.45□□□□□ -0.1
COL9A3-206ENST00000466532 DHFRP00374 187 aa14.45□□□□□ -0.1
COL9A3-206ENST00000466532 CRYGCP07315 174 aa14.45□□□□□ -0.1
COL9A3-206ENST00000466532 CLEC2LP0C7M8 214 aa14.45□□□□□ -0.1
COL9A3-206ENST00000466532 PTHLHP12272 177 aa14.45□□□□□ -0.1
COL9A3-206ENST00000466532 PSMB6P28072 239 aa14.45□□□□□ -0.1
COL9A3-206ENST00000466532 FCGR2CP31995 323 aa14.45□□□□□ -0.1
COL9A3-206ENST00000466532 ARL3P36405 182 aa14.45□□□□□ -0.1
COL9A3-206ENST00000466532 RPL8P62917 257 aaKnown RBP14.45□□□□□ -0.1
COL9A3-206ENST00000466532 CLEC19AQ6UXS0 136 aa14.45□□□□□ -0.1
COL9A3-206ENST00000466532 DEFB125Q8N687 156 aa14.45□□□□□ -0.1
COL9A3-206ENST00000466532 GVQW1Q8N7I0 195 aa14.45□□□□□ -0.1
COL9A3-206ENST00000466532 OR5H6Q8NGV6 325 aa14.45□□□□□ -0.1
COL9A3-206ENST00000466532 CCDC140Q96MF4 163 aa14.45□□□□□ -0.1
COL9A3-206ENST00000466532 FANCD2OSQ96PS1 177 aa14.45□□□□□ -0.1
COL9A3-206ENST00000466532 HIPK2Q9H2X6 1198 aa14.45□□□□□ -0.1
COL9A3-206ENST00000466532 TECRQ9NZ01 308 aaKnown RBP14.45□□□□□ -0.1
COL9A3-206ENST00000466532 MYOD1P15172 320 aa14.44□□□□□ -0.1
COL9A3-206ENST00000466532 HLA-GP17693 338 aa14.44□□□□□ -0.1
COL9A3-206ENST00000466532 SCAND1P57086 179 aa14.44□□□□□ -0.1
COL9A3-206ENST00000466532 IDNKQ5T6J7 187 aa14.44□□□□□ -0.1
COL9A3-206ENST00000466532 OR4A47Q6IF82 309 aa14.44□□□□□ -0.1
COL9A3-206ENST00000466532 GPHB5Q86YW7 130 aa14.44□□□□□ -0.1
COL9A3-206ENST00000466532 OR13F1Q8NGS4 319 aa14.44□□□□□ -0.1
COL9A3-206ENST00000466532 CACNG8Q8WXS5 425 aa14.44□□□□□ -0.1
COL9A3-206ENST00000466532 EEF1AKMT3Q96AZ1 226 aa14.44□□□□□ -0.1
COL9A3-206ENST00000466532 SLC25A38Q96DW6 304 aa14.44□□□□□ -0.1
COL9A3-206ENST00000466532 WDR89Q96FK6 387 aaPredicted RBP14.44□□□□□ -0.1
COL9A3-206ENST00000466532 FAM110AQ9BQ89 295 aa14.44□□□□□ -0.1
COL9A3-206ENST00000466532 WFDC10AQ9H1F0 79 aa14.44□□□□□ -0.1
COL9A3-206ENST00000466532 RNF167Q9H6Y7 350 aa14.44□□□□□ -0.1
COL9A3-206ENST00000466532 SRD5A3Q9H8P0 318 aa14.44□□□□□ -0.1
COL9A3-206ENST00000466532 ZC4H2Q9NQZ6 224 aa14.44□□□□□ -0.1
COL9A3-206ENST00000466532 ETV7Q9Y603 341 aa14.44□□□□□ -0.1
COL9A3-206ENST00000466532 OR11H12B2RN74 326 aa14.43□□□□□ -0.1
COL9A3-206ENST00000466532 REG1AP05451 166 aa14.43□□□□□ -0.1
COL9A3-206ENST00000466532 DEFA4P12838 97 aa14.43□□□□□ -0.1
COL9A3-206ENST00000466532 HIST1H1BP16401 226 aaKnown RBP14.43□□□□□ -0.1
COL9A3-206ENST00000466532 CTRB1P17538 263 aa14.43□□□□□ -0.1
COL9A3-206ENST00000466532 MSMO1Q15800 293 aa14.43□□□□□ -0.1
COL9A3-206ENST00000466532 TIMM50Q3ZCQ8 353 aa14.43□□□□□ -0.1
COL9A3-206ENST00000466532 CTRB2Q6GPI1 263 aa14.43□□□□□ -0.1
COL9A3-206ENST00000466532 HOGA1Q86XE5 327 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms