RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 SELLP14151 372 aa16■□□□□ 0.15
LIMS2-212ENST00000466410 CHRNA7P36544 502 aa16■□□□□ 0.15
LIMS2-212ENST00000466410 ERVK-16P61578 105 aa16■□□□□ 0.15
LIMS2-212ENST00000466410 FAM201AQ5SY85 155 aa16■□□□□ 0.15
LIMS2-212ENST00000466410 S1PR3Q99500 378 aa16■□□□□ 0.15
LIMS2-212ENST00000466410 MGST2Q99735 147 aa16■□□□□ 0.15
LIMS2-212ENST00000466410 TMEM140Q9NV12 185 aa16■□□□□ 0.15
LIMS2-212ENST00000466410 RBFOX2O43251 390 aaKnown RBP eCLIP15.99■□□□□ 0.15
LIMS2-212ENST00000466410 PPP1R35Q8TAP8 253 aa15.99■□□□□ 0.15
LIMS2-212ENST00000466410 RAB1CQ92928 201 aa15.99■□□□□ 0.15
LIMS2-212ENST00000466410 SDSLQ96GA7 329 aa15.99■□□□□ 0.15
LIMS2-212ENST00000466410 NDUFB4O95168 129 aa15.99■□□□□ 0.15
LIMS2-212ENST00000466410 CFHR2P36980 270 aa15.99■□□□□ 0.15
LIMS2-212ENST00000466410 RPP30P78346 268 aaKnown RBP15.99■□□□□ 0.15
LIMS2-212ENST00000466410 DEFB109BQ30KR1 87 aa15.99■□□□□ 0.15
LIMS2-212ENST00000466410 MIC13Q5XKP0 118 aa15.99■□□□□ 0.15
LIMS2-212ENST00000466410 VHLLQ6RSH7 139 aa15.99■□□□□ 0.15
LIMS2-212ENST00000466410 LINC01551Q86U37 167 aa15.99■□□□□ 0.15
LIMS2-212ENST00000466410 C1orf174Q8IYL3 243 aa15.99■□□□□ 0.15
LIMS2-212ENST00000466410 OR2T10Q8NGZ9 312 aa15.99■□□□□ 0.15
LIMS2-212ENST00000466410 OR1P1Q8NH06 330 aa15.99■□□□□ 0.15
LIMS2-212ENST00000466410 OR52E5Q8NH55 327 aa15.99■□□□□ 0.15
LIMS2-212ENST00000466410 CALYQ9NYX4 217 aa15.99■□□□□ 0.15
LIMS2-212ENST00000466410 M0R1B8 84 aa15.98■□□□□ 0.15
LIMS2-212ENST00000466410 FTH1P19P0C7X4 201 aa15.98■□□□□ 0.15
LIMS2-212ENST00000466410 OPRK1P41145 380 aa15.98■□□□□ 0.15
LIMS2-212ENST00000466410 S100PBPQ96BU1 408 aa15.98■□□□□ 0.15
LIMS2-212ENST00000466410 GGTLC1Q9BX51 225 aa15.98■□□□□ 0.15
LIMS2-212ENST00000466410 ZNF292O60281 2723 aa15.98■□□□□ 0.15
LIMS2-212ENST00000466410 SPRY3O43610 288 aa15.98■□□□□ 0.15
LIMS2-212ENST00000466410 PDE6DO43924 150 aa15.98■□□□□ 0.15
LIMS2-212ENST00000466410 GGCTO75223 188 aaKnown RBP15.98■□□□□ 0.15
LIMS2-212ENST00000466410 MPDU1O75352 247 aa15.98■□□□□ 0.15
LIMS2-212ENST00000466410 FAM3BP58499 235 aaPredicted RBP15.98■□□□□ 0.15
LIMS2-212ENST00000466410 TMEM249Q2WGJ8 235 aa15.98■□□□□ 0.15
LIMS2-212ENST00000466410 FAM169BQ8N8A8 192 aa15.98■□□□□ 0.15
LIMS2-212ENST00000466410 TCF19Q9Y242 345 aa15.98■□□□□ 0.15
LIMS2-212ENST00000466410 XKRY2A2RUG3 117 aa15.97■□□□□ 0.15
LIMS2-212ENST00000466410 LY86O95711 162 aa15.97■□□□□ 0.15
LIMS2-212ENST00000466410 AMBPP02760 352 aa15.97■□□□□ 0.15
LIMS2-212ENST00000466410 ARL14EPLP0DKL9 152 aa15.97■□□□□ 0.15
LIMS2-212ENST00000466410 PDLIM3Q53GG5 364 aaPredicted RBP15.97■□□□□ 0.15
LIMS2-212ENST00000466410 TMEM37Q8WXS4 190 aa15.97■□□□□ 0.15
LIMS2-212ENST00000466410 DDB2Q92466 427 aa15.97■□□□□ 0.15
LIMS2-212ENST00000466410 PXMP4Q9Y6I8 212 aa15.97■□□□□ 0.15
LIMS2-212ENST00000466410 PGPEP1LA6NFU8 196 aa15.97■□□□□ 0.15
LIMS2-212ENST00000466410 PRSS8Q16651 343 aa15.97■□□□□ 0.15
LIMS2-212ENST00000466410 ZNF114Q8NC26 417 aa15.97■□□□□ 0.15
LIMS2-212ENST00000466410 C1orf159Q96HA4 380 aa15.97■□□□□ 0.15
LIMS2-212ENST00000466410 FUT9Q9Y231 359 aa15.97■□□□□ 0.15
LIMS2-212ENST00000466410 DSCAML1Q8TD84 2053 aa15.96■□□□□ 0.15
LIMS2-212ENST00000466410 CGB3P0DN86 165 aa15.96■□□□□ 0.15
LIMS2-212ENST00000466410 CGB7P0DN87 165 aa15.96■□□□□ 0.15
LIMS2-212ENST00000466410 SRP14P37108 136 aaKnown RBP15.96■□□□□ 0.15
LIMS2-212ENST00000466410 TMPRSS3P57727 454 aa15.96■□□□□ 0.15
LIMS2-212ENST00000466410 C17orf58Q2M2W7 97 aa15.96■□□□□ 0.15
LIMS2-212ENST00000466410 CT45A1Q5HYN5 189 aa15.96■□□□□ 0.15
LIMS2-212ENST00000466410 CT45A3Q8NHU0 189 aa15.96■□□□□ 0.15
LIMS2-212ENST00000466410 ITLN1Q8WWA0 313 aa15.96■□□□□ 0.15
LIMS2-212ENST00000466410 TMEM204Q9BSN7 226 aa15.96■□□□□ 0.15
LIMS2-212ENST00000466410 KCNIP2Q9NS61 270 aa15.96■□□□□ 0.15
LIMS2-212ENST00000466410 ZMAT5Q9UDW3 170 aaKnown RBP15.96■□□□□ 0.15
LIMS2-212ENST00000466410 PLCE1Q9P212 2302 aa15.96■□□□□ 0.15
LIMS2-212ENST00000466410 LHBP01229 141 aa15.96■□□□□ 0.15
LIMS2-212ENST00000466410 COL8A2P25067 703 aa15.96■□□□□ 0.15
LIMS2-212ENST00000466410 DUX4L9Q6RFH8 374 aaPredicted RBP15.96■□□□□ 0.15
LIMS2-212ENST00000466410 SSMEM1Q8WWF3 244 aa15.96■□□□□ 0.15
LIMS2-212ENST00000466410 RP1L1Q8IWN7 2480 aaPredicted RBP15.95■□□□□ 0.14
LIMS2-212ENST00000466410 MBD3L4A6NDZ8 208 aaPredicted RBP15.95■□□□□ 0.14
LIMS2-212ENST00000466410 MBD3L3A6NE82 208 aaPredicted RBP15.95■□□□□ 0.14
LIMS2-212ENST00000466410 MBD3L5A6NJ08 208 aaPredicted RBP15.95■□□□□ 0.14
LIMS2-212ENST00000466410 C1QTNF9P0C862 333 aa15.95■□□□□ 0.14
LIMS2-212ENST00000466410 NUBP1P53384 320 aa15.95■□□□□ 0.14
LIMS2-212ENST00000466410 KLF3P57682 345 aaPredicted RBP15.95■□□□□ 0.14
LIMS2-212ENST00000466410 COA6Q5JTJ3 125 aaKnown RBP15.95■□□□□ 0.14
LIMS2-212ENST00000466410 ACTL10Q5JWF8 245 aa15.95■□□□□ 0.14
LIMS2-212ENST00000466410 ZNF474Q6S9Z5 364 aaPredicted RBP15.95■□□□□ 0.14
LIMS2-212ENST00000466410 RPRMLQ8N4K4 120 aa15.95■□□□□ 0.14
LIMS2-212ENST00000466410 MBD3L2Q8NHZ7 208 aaPredicted RBP15.95■□□□□ 0.14
LIMS2-212ENST00000466410 TMPRSS2O15393 492 aa15.95■□□□□ 0.14
LIMS2-212ENST00000466410 DNLZQ5SXM8 178 aa15.95■□□□□ 0.14
LIMS2-212ENST00000466410 FAM78BQ5VT40 261 aa15.95■□□□□ 0.14
LIMS2-212ENST00000466410 FAM216AQ8WUB2 273 aa15.95■□□□□ 0.14
LIMS2-212ENST00000466410 RHOVQ96L33 236 aa15.95■□□□□ 0.14
LIMS2-212ENST00000466410 GATCO43716 136 aaKnown RBP15.94■□□□□ 0.14
LIMS2-212ENST00000466410 TYMSP04818 313 aa15.94■□□□□ 0.14
LIMS2-212ENST00000466410 STAG3L2P0CL84 134 aa15.94■□□□□ 0.14
LIMS2-212ENST00000466410 STAG3L3P0CL85 134 aa15.94■□□□□ 0.14
LIMS2-212ENST00000466410 OR4S2Q8NH73 311 aa15.94■□□□□ 0.14
LIMS2-212ENST00000466410 TRBV20OR9-2A0A075B6H5 130 aa15.94■□□□□ 0.14
LIMS2-212ENST00000466410 SAA2-SAA4A0A096LPE2 208 aa15.94■□□□□ 0.14
LIMS2-212ENST00000466410 SOX15O60248 233 aa15.94■□□□□ 0.14
LIMS2-212ENST00000466410 SAA2P0DJI9 122 aaPredicted RBP15.94■□□□□ 0.14
LIMS2-212ENST00000466410 DEFA6Q01524 100 aa15.94■□□□□ 0.14
LIMS2-212ENST00000466410 ARSJQ5FYB0 599 aaPredicted RBP15.94■□□□□ 0.14
LIMS2-212ENST00000466410 PRO1933Q9H354 126 aa15.94■□□□□ 0.14
LIMS2-212ENST00000466410 LSM4Q9Y4Z0 139 aaKnown RBP15.94■□□□□ 0.14
LIMS2-212ENST00000466410 C15orf61A6NNL5 157 aa15.93■□□□□ 0.14
LIMS2-212ENST00000466410 IL3RAP26951 378 aa15.93■□□□□ 0.14
LIMS2-212ENST00000466410 KIR2DS2P43631 304 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms