RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 C2orf70A6NJV1 201 aa10.22□□□□□ -0.77
CHD3-207ENST00000466233 A8MWP6 167 aa10.22□□□□□ -0.77
CHD3-207ENST00000466233 FOLR2P14207 255 aa10.22□□□□□ -0.77
CHD3-207ENST00000466233 NFYAP23511 347 aaPredicted RBP10.22□□□□□ -0.77
CHD3-207ENST00000466233 PSMB6P28072 239 aa10.22□□□□□ -0.77
CHD3-207ENST00000466233 CD81P60033 236 aa10.22□□□□□ -0.77
CHD3-207ENST00000466233 ANKRD55Q3KP44 614 aa10.22□□□□□ -0.77
CHD3-207ENST00000466233 FAM106AQ4KMX7 169 aa10.22□□□□□ -0.77
CHD3-207ENST00000466233 C22orf42Q6IC83 251 aa10.22□□□□□ -0.77
CHD3-207ENST00000466233 OR4A47Q6IF82 309 aa10.22□□□□□ -0.77
CHD3-207ENST00000466233 MFSD4AQ8N468 514 aa10.22□□□□□ -0.77
CHD3-207ENST00000466233 DYNLRB2Q8TF09 96 aa10.22□□□□□ -0.77
CHD3-207ENST00000466233 MARC2Q969Z3 335 aa10.22□□□□□ -0.77
CHD3-207ENST00000466233 YTHDF1Q9BYJ9 559 aaKnown RBP10.22□□□□□ -0.77
CHD3-207ENST00000466233 BET1LQ9NYM9 111 aa10.22□□□□□ -0.77
CHD3-207ENST00000466233 ADAM30Q9UKF2 790 aa10.22□□□□□ -0.77
CHD3-207ENST00000466233 DPPA5A6NC42 116 aa10.21□□□□□ -0.77
CHD3-207ENST00000466233 IL6RP08887 468 aaPredicted RBP10.21□□□□□ -0.77
CHD3-207ENST00000466233 APELAP0DMC3 54 aa10.21□□□□□ -0.77
CHD3-207ENST00000466233 CTRB1P17538 263 aa10.21□□□□□ -0.77
CHD3-207ENST00000466233 CBLN1P23435 193 aa10.21□□□□□ -0.77
CHD3-207ENST00000466233 RPL27AP46776 148 aaKnown RBP10.21□□□□□ -0.77
CHD3-207ENST00000466233 BRWD1-AS2P59051 145 aa10.21□□□□□ -0.77
CHD3-207ENST00000466233 GNG2P59768 71 aa10.21□□□□□ -0.77
CHD3-207ENST00000466233 RPL30P62888 115 aaKnown RBP10.21□□□□□ -0.77
CHD3-207ENST00000466233 POU2AF1Q16633 256 aa10.21□□□□□ -0.77
CHD3-207ENST00000466233 ZFAND6Q6FIF0 208 aa10.21□□□□□ -0.77
CHD3-207ENST00000466233 CTRB2Q6GPI1 263 aa10.21□□□□□ -0.77
CHD3-207ENST00000466233 THOC7Q6I9Y2 204 aaKnown RBP10.21□□□□□ -0.77
CHD3-207ENST00000466233 SLC16A13Q7RTY0 426 aa10.21□□□□□ -0.77
CHD3-207ENST00000466233 CADM3Q8N126 398 aa10.21□□□□□ -0.77
CHD3-207ENST00000466233 CXorf58Q96LI9 332 aa10.21□□□□□ -0.77
CHD3-207ENST00000466233 FANCD2OSQ96PS1 177 aa10.21□□□□□ -0.77
CHD3-207ENST00000466233 ATP6V0BQ99437 205 aa10.21□□□□□ -0.77
CHD3-207ENST00000466233 TXNL4BQ9NX01 149 aaKnown RBP10.21□□□□□ -0.77
CHD3-207ENST00000466233 FBXL7Q9UJT9 491 aa10.21□□□□□ -0.77
CHD3-207ENST00000466233 ETV7Q9Y603 341 aa10.21□□□□□ -0.77
CHD3-207ENST00000466233 CSMD3Q7Z407 3707 aa10.21□□□□□ -0.78
CHD3-207ENST00000466233 DYNC2H1Q8NCM8 4307 aaKnown RBP10.2□□□□□ -0.78
CHD3-207ENST00000466233 TRAV25A0A0B4J276 109 aa10.2□□□□□ -0.78
CHD3-207ENST00000466233 OR11H12B2RN74 326 aa10.2□□□□□ -0.78
CHD3-207ENST00000466233 OR2J3O76001 311 aa10.2□□□□□ -0.78
CHD3-207ENST00000466233 JTBO76095 146 aa10.2□□□□□ -0.78
CHD3-207ENST00000466233 PRH1P02810 166 aa10.2□□□□□ -0.78
CHD3-207ENST00000466233 ELLP55199 621 aaPredicted RBP10.2□□□□□ -0.78
CHD3-207ENST00000466233 RPL8P62917 257 aaKnown RBP10.2□□□□□ -0.78
CHD3-207ENST00000466233 IZUMO2Q6UXV1 221 aa10.2□□□□□ -0.78
CHD3-207ENST00000466233 CD300LFQ8TDQ1 290 aa10.2□□□□□ -0.78
CHD3-207ENST00000466233 TCTEX1D2Q8WW35 142 aa10.2□□□□□ -0.78
CHD3-207ENST00000466233 BORCS5Q969J3 196 aa10.2□□□□□ -0.78
CHD3-207ENST00000466233 EEF1AKMT3Q96AZ1 226 aa10.2□□□□□ -0.78
CHD3-207ENST00000466233 CNBD2Q96M20 576 aa10.2□□□□□ -0.78
CHD3-207ENST00000466233 THYN1Q9P016 225 aa10.2□□□□□ -0.78
CHD3-207ENST00000466233 ELF5Q9UKW6 265 aaPredicted RBP10.2□□□□□ -0.78
CHD3-207ENST00000466233 IGKV1D-13A0A0B4J2D9 117 aa10.19□□□□□ -0.78
CHD3-207ENST00000466233 TMEM235A6NFC5 223 aa10.19□□□□□ -0.78
CHD3-207ENST00000466233 CYB5BO43169 146 aa10.19□□□□□ -0.78
CHD3-207ENST00000466233 OR2C1O95371 312 aa10.19□□□□□ -0.78
CHD3-207ENST00000466233 C8orf88P0DMB2 117 aa10.19□□□□□ -0.78
CHD3-207ENST00000466233 IGKV1-13P0DP09 117 aa10.19□□□□□ -0.78
CHD3-207ENST00000466233 ARL3P36405 182 aa10.19□□□□□ -0.78
CHD3-207ENST00000466233 TAS2R31P59538 309 aa10.19□□□□□ -0.78
CHD3-207ENST00000466233 ARPC4P59998 168 aa10.19□□□□□ -0.78
CHD3-207ENST00000466233 DEFA5Q01523 94 aa10.19□□□□□ -0.78
CHD3-207ENST00000466233 C10orf55Q5SWW7 151 aa10.19□□□□□ -0.78
CHD3-207ENST00000466233 SFXN4Q6P4A7 337 aa10.19□□□□□ -0.78
CHD3-207ENST00000466233 HSD17B13Q7Z5P4 300 aaPredicted RBP10.19□□□□□ -0.78
CHD3-207ENST00000466233 CCDC140Q96MF4 163 aa10.19□□□□□ -0.78
CHD3-207ENST00000466233 PLEKHA3Q9HB20 300 aa10.19□□□□□ -0.78
CHD3-207ENST00000466233 RHBDL2Q9NX52 303 aa10.19□□□□□ -0.78
CHD3-207ENST00000466233 SSR3Q9UNL2 185 aa10.19□□□□□ -0.78
CHD3-207ENST00000466233 IGLV11-55A0A075B6I3 123 aa10.18□□□□□ -0.78
CHD3-207ENST00000466233 RBMY1BA6NDE4 496 aaKnown RBP10.18□□□□□ -0.78
CHD3-207ENST00000466233 RBMY1EA6NEQ0 496 aaKnown RBP10.18□□□□□ -0.78
CHD3-207ENST00000466233 HMX3A6NHT5 357 aa10.18□□□□□ -0.78
CHD3-207ENST00000466233 ANKRD65E5RJM6 399 aa10.18□□□□□ -0.78
CHD3-207ENST00000466233 SSX5O60225 188 aa10.18□□□□□ -0.78
CHD3-207ENST00000466233 HPRT1P00492 218 aa10.18□□□□□ -0.78
CHD3-207ENST00000466233 CD7P09564 240 aa10.18□□□□□ -0.78
CHD3-207ENST00000466233 RBMY1DP0C7P1 496 aaKnown RBP10.18□□□□□ -0.78
CHD3-207ENST00000466233 HLA-GP17693 338 aa10.18□□□□□ -0.78
CHD3-207ENST00000466233 CBX5P45973 191 aa10.18□□□□□ -0.78
CHD3-207ENST00000466233 ZNF57Q68EA5 555 aaPredicted RBP10.18□□□□□ -0.78
CHD3-207ENST00000466233 HOGA1Q86XE5 327 aa10.18□□□□□ -0.78
CHD3-207ENST00000466233 SPARTQ8N0X7 666 aa10.18□□□□□ -0.78
CHD3-207ENST00000466233 BEST4Q8NFU0 473 aa10.18□□□□□ -0.78
CHD3-207ENST00000466233 NUDCD2Q8WVJ2 157 aa10.18□□□□□ -0.78
CHD3-207ENST00000466233 GIMAP1Q8WWP7 306 aa10.18□□□□□ -0.78
CHD3-207ENST00000466233 SRD5A3Q9H8P0 318 aa10.18□□□□□ -0.78
CHD3-207ENST00000466233 DAPK2Q9UIK4 370 aa10.18□□□□□ -0.78
CHD3-207ENST00000466233 SPATA2Q9UM82 520 aa10.18□□□□□ -0.78
CHD3-207ENST00000466233 RYR2Q92736 4967 aa10.17□□□□□ -0.78
CHD3-207ENST00000466233 LYSTQ99698 3801 aa10.17□□□□□ -0.78
CHD3-207ENST00000466233 A0A1B0GW64 132 aa10.17□□□□□ -0.78
CHD3-207ENST00000466233 TMEM213A2RRL7 107 aa10.17□□□□□ -0.78
CHD3-207ENST00000466233 PPP5D1E7EU14 171 aa10.17□□□□□ -0.78
CHD3-207ENST00000466233 E7EUB6 86 aa10.17□□□□□ -0.78
CHD3-207ENST00000466233 NDUFB8O95169 186 aa10.17□□□□□ -0.78
CHD3-207ENST00000466233 DEFA4P12838 97 aa10.17□□□□□ -0.78
CHD3-207ENST00000466233 MYOD1P15172 320 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms