RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 SFXN4Q6P4A7 337 aa1.14□□□□□ -2.23
SMC4-205ENST00000465563 SLC35E3Q7Z769 313 aa1.14□□□□□ -2.23
SMC4-205ENST00000465563 COMMD7Q86VX2 200 aa1.14□□□□□ -2.23
SMC4-205ENST00000465563 OR51T1Q8NGJ9 327 aa1.14□□□□□ -2.23
SMC4-205ENST00000465563 OR13C8Q8NGS7 320 aa1.14□□□□□ -2.23
SMC4-205ENST00000465563 ZNHIT6Q9NWK9 470 aaKnown RBP1.14□□□□□ -2.23
SMC4-205ENST00000465563 FLG2Q5D862 2391 aaPredicted RBP1.13□□□□□ -2.23
SMC4-205ENST00000465563 EVPLLA8MZ36 301 aa1.13□□□□□ -2.23
SMC4-205ENST00000465563 DISC1C4P0D8 188 aa1.13□□□□□ -2.23
SMC4-205ENST00000465563 TXNDC9O14530 226 aa1.13□□□□□ -2.23
SMC4-205ENST00000465563 SLC16A4O15374 487 aa1.13□□□□□ -2.23
SMC4-205ENST00000465563 PLA2G10O15496 165 aa1.13□□□□□ -2.23
SMC4-205ENST00000465563 NAPSAO96009 420 aa1.13□□□□□ -2.23
SMC4-205ENST00000465563 CA5AP35218 305 aa1.13□□□□□ -2.23
SMC4-205ENST00000465563 CCR2P41597 374 aa1.13□□□□□ -2.23
SMC4-205ENST00000465563 ERHP84090 104 aaKnown RBP1.13□□□□□ -2.23
SMC4-205ENST00000465563 RELAQ04206 551 aa1.13□□□□□ -2.23
SMC4-205ENST00000465563 ACSM3Q53FZ2 586 aa1.13□□□□□ -2.23
SMC4-205ENST00000465563 C1orf195Q5TG92 126 aa1.13□□□□□ -2.23
SMC4-205ENST00000465563 LYZL1Q6UWQ5 148 aa1.13□□□□□ -2.23
SMC4-205ENST00000465563 DYNAPQ8N1N2 210 aa1.13□□□□□ -2.23
SMC4-205ENST00000465563 SLC22A24Q8N4F4 322 aa1.13□□□□□ -2.23
SMC4-205ENST00000465563 RAB8BQ92930 207 aa1.13□□□□□ -2.23
SMC4-205ENST00000465563 C12orf43Q96C57 262 aaKnown RBP1.13□□□□□ -2.23
SMC4-205ENST00000465563 DRC3Q9H069 523 aa1.13□□□□□ -2.23
SMC4-205ENST00000465563 NKIRAS1Q9NYS0 192 aa1.13□□□□□ -2.23
SMC4-205ENST00000465563 USE1Q9NZ43 259 aa1.13□□□□□ -2.23
SMC4-205ENST00000465563 C3orf18Q9UK00 162 aa1.13□□□□□ -2.23
SMC4-205ENST00000465563 PRELID1Q9Y255 219 aa1.13□□□□□ -2.23
SMC4-205ENST00000465563 NUP160Q12769 1436 aa1.13□□□□□ -2.23
SMC4-205ENST00000465563 LAMB2P55268 1798 aa1.12□□□□□ -2.23
SMC4-205ENST00000465563 A0A0J9YW62 118 aa1.12□□□□□ -2.23
SMC4-205ENST00000465563 OR4C45A6NMZ5 311 aa1.12□□□□□ -2.23
SMC4-205ENST00000465563 PGLYRP1O75594 196 aaPredicted RBP1.12□□□□□ -2.23
SMC4-205ENST00000465563 NSA2O95478 260 aaKnown RBP1.12□□□□□ -2.23
SMC4-205ENST00000465563 RPS12P25398 132 aaKnown RBP1.12□□□□□ -2.23
SMC4-205ENST00000465563 EMX1Q04741 257 aaPredicted RBP1.12□□□□□ -2.23
SMC4-205ENST00000465563 RSU1Q15404 277 aa1.12□□□□□ -2.23
SMC4-205ENST00000465563 FAM201AQ5SY85 155 aa1.12□□□□□ -2.23
SMC4-205ENST00000465563 CLVS2Q5SYC1 327 aa1.12□□□□□ -2.23
SMC4-205ENST00000465563 CD200R1LQ6Q8B3 271 aa1.12□□□□□ -2.23
SMC4-205ENST00000465563 DEFB125Q8N687 156 aa1.12□□□□□ -2.23
SMC4-205ENST00000465563 OR51I2Q9H344 312 aa1.12□□□□□ -2.23
SMC4-205ENST00000465563 GPR84Q9NQS5 396 aa1.12□□□□□ -2.23
SMC4-205ENST00000465563 XPNPEP1Q9NQW7 623 aa1.12□□□□□ -2.23
SMC4-205ENST00000465563 NOSIPQ9Y314 301 aaKnown RBP1.12□□□□□ -2.23
SMC4-205ENST00000465563 PXMP4Q9Y6I8 212 aa1.12□□□□□ -2.23
SMC4-205ENST00000465563 DOCK5Q9H7D0 1870 aa1.12□□□□□ -2.23
SMC4-205ENST00000465563 STRCQ7RTU9 1775 aa1.11□□□□□ -2.23
SMC4-205ENST00000465563 TRAV7A0A075B6U4 112 aa1.11□□□□□ -2.23
SMC4-205ENST00000465563 IGHV1-18A0A0C4DH31 117 aa1.11□□□□□ -2.23
SMC4-205ENST00000465563 IGHV1-69-2A0A0G2JMI3 117 aa1.11□□□□□ -2.23
SMC4-205ENST00000465563 LRRN3E7EW58 273 aa1.11□□□□□ -2.23
SMC4-205ENST00000465563 APOEP02649 317 aa1.11□□□□□ -2.23
SMC4-205ENST00000465563 LGALS1P09382 135 aaKnown RBP1.11□□□□□ -2.23
SMC4-205ENST00000465563 ZNF705DP0CH99 300 aaPredicted RBP1.11□□□□□ -2.23
SMC4-205ENST00000465563 ZNF705BP0CI00 300 aaPredicted RBP1.11□□□□□ -2.23
SMC4-205ENST00000465563 MAP2K4P45985 399 aa1.11□□□□□ -2.23
SMC4-205ENST00000465563 SLCO1A2P46721 670 aa1.11□□□□□ -2.23
SMC4-205ENST00000465563 RPL28P46779 137 aaKnown RBP1.11□□□□□ -2.23
SMC4-205ENST00000465563 TPI1P60174 286 aa1.11□□□□□ -2.23
SMC4-205ENST00000465563 NAA20P61599 178 aa1.11□□□□□ -2.23
SMC4-205ENST00000465563 GLO1Q04760 184 aa1.11□□□□□ -2.23
SMC4-205ENST00000465563 C5orf46Q6UWT4 87 aa1.11□□□□□ -2.23
SMC4-205ENST00000465563 LRRC28Q86X40 367 aaPredicted RBP1.11□□□□□ -2.23
SMC4-205ENST00000465563 ZNF563Q8TA94 476 aa1.11□□□□□ -2.23
SMC4-205ENST00000465563 DDI1Q8WTU0 396 aa1.11□□□□□ -2.23
SMC4-205ENST00000465563 RNF133Q8WVZ7 376 aa1.11□□□□□ -2.23
SMC4-205ENST00000465563 PTH2Q96A98 100 aa1.11□□□□□ -2.23
SMC4-205ENST00000465563 IMMP2LQ96T52 175 aa1.11□□□□□ -2.23
SMC4-205ENST00000465563 HSPB9Q9BQS6 159 aa1.11□□□□□ -2.23
SMC4-205ENST00000465563 CXorf21Q9HAI6 301 aa1.11□□□□□ -2.23
SMC4-205ENST00000465563 XAGE1AQ9HD64 81 aa1.11□□□□□ -2.23
SMC4-205ENST00000465563 FGFR1OP2Q9NVK5 253 aa1.11□□□□□ -2.23
SMC4-205ENST00000465563 AK3Q9UIJ7 227 aa1.11□□□□□ -2.23
SMC4-205ENST00000465563 ARFGEF3Q5TH69 2177 aa1.11□□□□□ -2.23
SMC4-205ENST00000465563 SMARCA4P51532 1647 aa1.11□□□□□ -2.23
SMC4-205ENST00000465563 DIDO1Q9BTC0 2240 aaKnown RBP1.11□□□□□ -2.23
SMC4-205ENST00000465563 C9orf84Q5VXU9 1444 aa1.1□□□□□ -2.23
SMC4-205ENST00000465563 SIGLEC16A6NMB1 481 aa1.1□□□□□ -2.23
SMC4-205ENST00000465563 ZNF737O75373 536 aa1.1□□□□□ -2.23
SMC4-205ENST00000465563 TFPTP0C1Z6 253 aa1.1□□□□□ -2.23
SMC4-205ENST00000465563 DEFA4P12838 97 aa1.1□□□□□ -2.23
SMC4-205ENST00000465563 MYL12AP19105 171 aa1.1□□□□□ -2.23
SMC4-205ENST00000465563 PSMB8P28062 276 aa1.1□□□□□ -2.23
SMC4-205ENST00000465563 MARCKSL1P49006 195 aa1.1□□□□□ -2.23
SMC4-205ENST00000465563 RAB5BP61020 215 aa1.1□□□□□ -2.23
SMC4-205ENST00000465563 RAB14P61106 215 aa1.1□□□□□ -2.23
SMC4-205ENST00000465563 RPL30P62888 115 aaKnown RBP1.1□□□□□ -2.23
SMC4-205ENST00000465563 SLC38A11Q08AI6 406 aa1.1□□□□□ -2.23
SMC4-205ENST00000465563 OGFRL1Q5TC84 451 aaPredicted RBP1.1□□□□□ -2.23
SMC4-205ENST00000465563 ALKAL1Q6UXT8 129 aa1.1□□□□□ -2.23
SMC4-205ENST00000465563 SSX8Q7RTT4 187 aa1.1□□□□□ -2.23
SMC4-205ENST00000465563 COA5Q86WW8 74 aa1.1□□□□□ -2.23
SMC4-205ENST00000465563 C10orf67Q8IYJ2 551 aa1.1□□□□□ -2.23
SMC4-205ENST00000465563 TESCQ96BS2 214 aa1.1□□□□□ -2.23
SMC4-205ENST00000465563 OR51I1Q9H343 314 aa1.1□□□□□ -2.23
SMC4-205ENST00000465563 SCAF11Q99590 1463 aaKnown RBP1.1□□□□□ -2.23
SMC4-205ENST00000465563 DCCP43146 1447 aa1.09□□□□□ -2.23
SMC4-205ENST00000465563 H3BT86 120 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms