RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 DYNLRB2Q8TF09 96 aa7.3□□□□□ -1.24
USP39-212ENST00000465514 DCUN1D5Q9BTE7 237 aa7.3□□□□□ -1.24
USP39-212ENST00000465514 CENPOQ9BU64 300 aa7.3□□□□□ -1.24
USP39-212ENST00000465514 WFDC10AQ9H1F0 79 aa7.3□□□□□ -1.24
USP39-212ENST00000465514 SRD5A3Q9H8P0 318 aa7.3□□□□□ -1.24
USP39-212ENST00000465514 SLC2A8Q9NY64 477 aa7.3□□□□□ -1.24
USP39-212ENST00000465514 ELF5Q9UKW6 265 aaPredicted RBP7.3□□□□□ -1.24
USP39-212ENST00000465514 DMRT1Q9Y5R6 373 aa7.3□□□□□ -1.24
USP39-212ENST00000465514 TRAV1-2A0A0B4J238 106 aa7.29□□□□□ -1.24
USP39-212ENST00000465514 METTL21EPA6NDL7 271 aa7.29□□□□□ -1.24
USP39-212ENST00000465514 ERICH4A6NGS2 130 aa7.29□□□□□ -1.24
USP39-212ENST00000465514 HMX3A6NHT5 357 aa7.29□□□□□ -1.24
USP39-212ENST00000465514 C2orf70A6NJV1 201 aa7.29□□□□□ -1.24
USP39-212ENST00000465514 OR11H12B2RN74 326 aa7.29□□□□□ -1.24
USP39-212ENST00000465514 CREBL2O60519 120 aaPredicted RBP7.29□□□□□ -1.24
USP39-212ENST00000465514 OR2C1O95371 312 aa7.29□□□□□ -1.24
USP39-212ENST00000465514 HLA-AP01891 365 aaKnown RBP7.29□□□□□ -1.24
USP39-212ENST00000465514 FOLR2P14207 255 aa7.29□□□□□ -1.24
USP39-212ENST00000465514 CRHBPP24387 322 aa7.29□□□□□ -1.24
USP39-212ENST00000465514 KIR2DS2P43631 304 aa7.29□□□□□ -1.24
USP39-212ENST00000465514 OR2B11Q5JQS5 317 aa7.29□□□□□ -1.24
USP39-212ENST00000465514 PRSS48Q7RTY5 328 aa7.29□□□□□ -1.24
USP39-212ENST00000465514 SLC25A42Q86VD7 318 aa7.29□□□□□ -1.24
USP39-212ENST00000465514 VKORC1L1Q8N0U8 176 aa7.29□□□□□ -1.24
USP39-212ENST00000465514 ZNF645Q8N7E2 425 aa7.29□□□□□ -1.24
USP39-212ENST00000465514 NRG4Q8WWG1 115 aa7.29□□□□□ -1.24
USP39-212ENST00000465514 ATG5Q9H1Y0 275 aa7.29□□□□□ -1.24
USP39-212ENST00000465514 PRELID3BQ9Y3B1 194 aa7.29□□□□□ -1.24
USP39-212ENST00000465514 DNAH17Q9UFH2 4485 aa7.29□□□□□ -1.24
USP39-212ENST00000465514 A0A0J9YWU9 116 aa7.28□□□□□ -1.24
USP39-212ENST00000465514 TEX22C9J3V5 150 aa7.28□□□□□ -1.24
USP39-212ENST00000465514 ANKRD65E5RJM6 399 aa7.28□□□□□ -1.24
USP39-212ENST00000465514 LGALS9O00182 355 aa7.28□□□□□ -1.24
USP39-212ENST00000465514 GGCTO75223 188 aaKnown RBP7.28□□□□□ -1.24
USP39-212ENST00000465514 IGHV3-23P01764 117 aa7.28□□□□□ -1.24
USP39-212ENST00000465514 HLA-DQB1P01920 261 aa7.28□□□□□ -1.24
USP39-212ENST00000465514 RAB3BP20337 219 aa7.28□□□□□ -1.24
USP39-212ENST00000465514 NFYAP23511 347 aaPredicted RBP7.28□□□□□ -1.24
USP39-212ENST00000465514 DTYMKP23919 212 aa7.28□□□□□ -1.24
USP39-212ENST00000465514 RPL30P62888 115 aaKnown RBP7.28□□□□□ -1.24
USP39-212ENST00000465514 SSX1Q16384 188 aa7.28□□□□□ -1.24
USP39-212ENST00000465514 CDNFQ49AH0 187 aa7.28□□□□□ -1.24
USP39-212ENST00000465514 FAM209BQ5JX69 171 aa7.28□□□□□ -1.24
USP39-212ENST00000465514 C19orf35Q6ZS72 473 aa7.28□□□□□ -1.24
USP39-212ENST00000465514 KCTD9Q7L273 389 aa7.28□□□□□ -1.24
USP39-212ENST00000465514 WDR89Q96FK6 387 aaPredicted RBP7.28□□□□□ -1.24
USP39-212ENST00000465514 OR51E2Q9H255 320 aa7.28□□□□□ -1.24
USP39-212ENST00000465514 ZC4H2Q9NQZ6 224 aa7.28□□□□□ -1.24
USP39-212ENST00000465514 TECRQ9NZ01 308 aaKnown RBP7.28□□□□□ -1.24
USP39-212ENST00000465514 FBXL7Q9UJT9 491 aa7.28□□□□□ -1.24
USP39-212ENST00000465514 ZNF257Q9Y2Q1 563 aa7.28□□□□□ -1.24
USP39-212ENST00000465514 MRPS7Q9Y2R9 242 aaKnown RBP7.28□□□□□ -1.24
USP39-212ENST00000465514 RBMX2Q9Y388 322 aaKnown RBP7.28□□□□□ -1.24
USP39-212ENST00000465514 OR2W1Q9Y3N9 320 aa7.28□□□□□ -1.24
USP39-212ENST00000465514 SELENOKQ9Y6D0 94 aa7.28□□□□□ -1.24
USP39-212ENST00000465514 UBR4Q5T4S7 5183 aa7.28□□□□□ -1.24
USP39-212ENST00000465514 IGKV1D-13A0A0B4J2D9 117 aa7.27□□□□□ -1.25
USP39-212ENST00000465514 DPPA5A6NC42 116 aa7.27□□□□□ -1.25
USP39-212ENST00000465514 NPIPB5A8MRT5 1133 aa7.27□□□□□ -1.25
USP39-212ENST00000465514 E7EUB6 86 aa7.27□□□□□ -1.25
USP39-212ENST00000465514 SLC22A5O76082 557 aa7.27□□□□□ -1.25
USP39-212ENST00000465514 NDUFB8O95169 186 aa7.27□□□□□ -1.25
USP39-212ENST00000465514 IGLV2-14P01704 120 aa7.27□□□□□ -1.25
USP39-212ENST00000465514 IL6RP08887 468 aaPredicted RBP7.27□□□□□ -1.25
USP39-212ENST00000465514 CTXN2P0C2S0 81 aa7.27□□□□□ -1.25
USP39-212ENST00000465514 IGKV1-13P0DP09 117 aa7.27□□□□□ -1.25
USP39-212ENST00000465514 CD36P16671 472 aa7.27□□□□□ -1.25
USP39-212ENST00000465514 CBLN1P23435 193 aa7.27□□□□□ -1.25
USP39-212ENST00000465514 MYL9P24844 172 aa7.27□□□□□ -1.25
USP39-212ENST00000465514 RPL27AP46776 148 aaKnown RBP7.27□□□□□ -1.25
USP39-212ENST00000465514 ARL6IP1Q15041 203 aa7.27□□□□□ -1.25
USP39-212ENST00000465514 NR2C2APQ86WQ0 139 aa7.27□□□□□ -1.25
USP39-212ENST00000465514 GPHB5Q86YW7 130 aa7.27□□□□□ -1.25
USP39-212ENST00000465514 CACNG8Q8WXS5 425 aa7.27□□□□□ -1.25
USP39-212ENST00000465514 FYTTD1Q96QD9 318 aaKnown RBP7.27□□□□□ -1.25
USP39-212ENST00000465514 OR2A7Q96R45 310 aa7.27□□□□□ -1.25
USP39-212ENST00000465514 OVOL2Q9BRP0 275 aa7.27□□□□□ -1.25
USP39-212ENST00000465514 SLC2A9Q9NRM0 540 aa7.27□□□□□ -1.25
USP39-212ENST00000465514 S4R3C0 116 aa7.27□□□□□ -1.25
USP39-212ENST00000465514 A0A1B0GW64 132 aa7.26□□□□□ -1.25
USP39-212ENST00000465514 TRDV1A0A1B0GX56 115 aa7.26□□□□□ -1.25
USP39-212ENST00000465514 ZNF320A2RRD8 509 aa7.26□□□□□ -1.25
USP39-212ENST00000465514 SMIM30A4D0T7 59 aa7.26□□□□□ -1.25
USP39-212ENST00000465514 KBTBD11O94819 623 aa7.26□□□□□ -1.25
USP39-212ENST00000465514 ZNF735P0CB33 412 aa7.26□□□□□ -1.25
USP39-212ENST00000465514 AREGP15514 252 aa7.26□□□□□ -1.25
USP39-212ENST00000465514 ARL3P36405 182 aa7.26□□□□□ -1.25
USP39-212ENST00000465514 BRWD1-AS2P59051 145 aa7.26□□□□□ -1.25
USP39-212ENST00000465514 TBCEQ15813 527 aaPredicted RBP7.26□□□□□ -1.25
USP39-212ENST00000465514 HACD4Q5VWC8 232 aa7.26□□□□□ -1.25
USP39-212ENST00000465514 ZNF57Q68EA5 555 aaPredicted RBP7.26□□□□□ -1.25
USP39-212ENST00000465514 C22orf42Q6IC83 251 aa7.26□□□□□ -1.25
USP39-212ENST00000465514 CNIH2Q6PI25 160 aa7.26□□□□□ -1.25
USP39-212ENST00000465514 CLEC19AQ6UXS0 136 aa7.26□□□□□ -1.25
USP39-212ENST00000465514 ZNF367Q7RTV3 350 aa7.26□□□□□ -1.25
USP39-212ENST00000465514 PUSL1Q8N0Z8 303 aaKnown RBP7.26□□□□□ -1.25
USP39-212ENST00000465514 OR4S2Q8NH73 311 aa7.26□□□□□ -1.25
USP39-212ENST00000465514 VSTM2AQ8TAG5 236 aa7.26□□□□□ -1.25
USP39-212ENST00000465514 TMEM167AQ8TBQ9 72 aa7.26□□□□□ -1.25
USP39-212ENST00000465514 NUDCD2Q8WVJ2 157 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms