RNA–Protein interactions for RNA: ENST00000465339.5

COL28A1-206, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 3

Gene COL28A1, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-206ENST00000465339 MAS1LP35410 378 aa10.13□□□□□ -0.79
COL28A1-206ENST00000465339 MRPS10P82664 201 aaKnown RBP10.13□□□□□ -0.79
COL28A1-206ENST00000465339 VAX1Q5SQQ9 334 aa10.13□□□□□ -0.79
COL28A1-206ENST00000465339 IDO2Q6ZQW0 420 aa10.13□□□□□ -0.79
COL28A1-206ENST00000465339 POC5Q8NA72 575 aa10.13□□□□□ -0.79
COL28A1-206ENST00000465339 OR5T1Q8NG75 326 aa10.13□□□□□ -0.79
COL28A1-206ENST00000465339 OR11H1Q8NG94 326 aa10.13□□□□□ -0.79
COL28A1-206ENST00000465339 OR1N2Q8NGR9 330 aa10.13□□□□□ -0.79
COL28A1-206ENST00000465339 TMEM167AQ8TBQ9 72 aa10.13□□□□□ -0.79
COL28A1-206ENST00000465339 DUX3Q96PT4 197 aa10.13□□□□□ -0.79
COL28A1-206ENST00000465339 PHB2Q99623 299 aa10.13□□□□□ -0.79
COL28A1-206ENST00000465339 ZNF430Q9H8G1 570 aaPredicted RBP10.13□□□□□ -0.79
COL28A1-206ENST00000465339 GNB4Q9HAV0 340 aa10.13□□□□□ -0.79
COL28A1-206ENST00000465339 ZNF355PQ9NSJ1 428 aa10.13□□□□□ -0.79
COL28A1-206ENST00000465339 KLK11Q9UBX7 282 aa10.13□□□□□ -0.79
COL28A1-206ENST00000465339 MTFP1Q9UDX5 166 aa10.13□□□□□ -0.79
COL28A1-206ENST00000465339 CEPT1Q9Y6K0 416 aa10.13□□□□□ -0.79
COL28A1-206ENST00000465339 GABARAPH6UMI1 98 aa10.12□□□□□ -0.79
COL28A1-206ENST00000465339 GPR31O00270 319 aa10.12□□□□□ -0.79
COL28A1-206ENST00000465339 RAMP3O60896 148 aa10.12□□□□□ -0.79
COL28A1-206ENST00000465339 PGLYRP1O75594 196 aaPredicted RBP10.12□□□□□ -0.79
COL28A1-206ENST00000465339 KBTBD11O94819 623 aa10.12□□□□□ -0.79
COL28A1-206ENST00000465339 TRGV3P03979 118 aa10.12□□□□□ -0.79
COL28A1-206ENST00000465339 TBPP20226 339 aa10.12□□□□□ -0.79
COL28A1-206ENST00000465339 S100GP29377 79 aa10.12□□□□□ -0.79
COL28A1-206ENST00000465339 UCP3P55916 312 aa10.12□□□□□ -0.79
COL28A1-206ENST00000465339 TAS2R31P59538 309 aa10.12□□□□□ -0.79
COL28A1-206ENST00000465339 SSBP1Q04837 148 aaKnown RBP10.12□□□□□ -0.79
COL28A1-206ENST00000465339 DEFB136Q30KP8 78 aa10.12□□□□□ -0.79
COL28A1-206ENST00000465339 PDLIM3Q53GG5 364 aaPredicted RBP10.12□□□□□ -0.79
COL28A1-206ENST00000465339 AADACL3Q5VUY0 350 aa10.12□□□□□ -0.79
COL28A1-206ENST00000465339 LAX1Q8IWV1 398 aa10.12□□□□□ -0.79
COL28A1-206ENST00000465339 VKORC1L1Q8N0U8 176 aa10.12□□□□□ -0.79
COL28A1-206ENST00000465339 PUSL1Q8N0Z8 303 aaKnown RBP10.12□□□□□ -0.79
COL28A1-206ENST00000465339 OR52I2Q8NH67 350 aa10.12□□□□□ -0.79
COL28A1-206ENST00000465339 OR4A5Q8NH83 315 aa10.12□□□□□ -0.79
COL28A1-206ENST00000465339 SRSF12Q8WXF0 261 aaKnown RBP10.12□□□□□ -0.79
COL28A1-206ENST00000465339 MS4A10Q96PG2 267 aa10.12□□□□□ -0.79
COL28A1-206ENST00000465339 SPIN2AQ99865 258 aa10.12□□□□□ -0.79
COL28A1-206ENST00000465339 SPIN2BQ9BPZ2 258 aa10.12□□□□□ -0.79
COL28A1-206ENST00000465339 PLEKHA2Q9HB19 425 aa10.12□□□□□ -0.79
COL28A1-206ENST00000465339 A0A0G2JLM5 398 aa10.11□□□□□ -0.79
COL28A1-206ENST00000465339 IFNA6P05013 189 aa10.11□□□□□ -0.79
COL28A1-206ENST00000465339 LGALS1P09382 135 aaKnown RBP10.11□□□□□ -0.79
COL28A1-206ENST00000465339 OR8U8P0C7N1 319 aa10.11□□□□□ -0.79
COL28A1-206ENST00000465339 NQO2P16083 231 aa10.11□□□□□ -0.79
COL28A1-206ENST00000465339 F2RP25116 425 aa10.11□□□□□ -0.79
COL28A1-206ENST00000465339 TPPP2P59282 170 aa10.11□□□□□ -0.79
COL28A1-206ENST00000465339 ZNF616Q08AN1 781 aa10.11□□□□□ -0.79
COL28A1-206ENST00000465339 FHL3Q13643 280 aa10.11□□□□□ -0.79
COL28A1-206ENST00000465339 RNASE10Q5GAN6 216 aaKnown RBP10.11□□□□□ -0.79
COL28A1-206ENST00000465339 ASPHD1Q5U4P2 390 aa10.11□□□□□ -0.79
COL28A1-206ENST00000465339 FOXB2Q5VYV0 432 aa10.11□□□□□ -0.79
COL28A1-206ENST00000465339 OR51H1Q8NH63 302 aa10.11□□□□□ -0.79
COL28A1-206ENST00000465339 CASTOR1Q8WTX7 329 aa10.11□□□□□ -0.79
COL28A1-206ENST00000465339 DPF1Q92782 380 aa10.11□□□□□ -0.79
COL28A1-206ENST00000465339 DIRAS2Q96HU8 199 aa10.11□□□□□ -0.79
COL28A1-206ENST00000465339 OR5B12Q96R08 314 aa10.11□□□□□ -0.79
COL28A1-206ENST00000465339 SLIRPQ9GZT3 109 aaKnown RBP10.11□□□□□ -0.79
COL28A1-206ENST00000465339 BET1LQ9NYM9 111 aa10.11□□□□□ -0.79
COL28A1-206ENST00000465339 CTDSPLO15194 276 aa10.1□□□□□ -0.79
COL28A1-206ENST00000465339 MPPED1O15442 326 aa10.1□□□□□ -0.79
COL28A1-206ENST00000465339 GHRHP01286 108 aa10.1□□□□□ -0.79
COL28A1-206ENST00000465339 OR9G9P0C7N8 305 aa10.1□□□□□ -0.79
COL28A1-206ENST00000465339 RAB25P57735 213 aa10.1□□□□□ -0.79
COL28A1-206ENST00000465339 POU2AF1Q16633 256 aa10.1□□□□□ -0.79
COL28A1-206ENST00000465339 RNASE12Q5GAN4 147 aaKnown RBP10.1□□□□□ -0.79
COL28A1-206ENST00000465339 OR4A47Q6IF82 309 aa10.1□□□□□ -0.79
COL28A1-206ENST00000465339 SSX9Q7RTT3 188 aa10.1□□□□□ -0.79
COL28A1-206ENST00000465339 ARRDC1Q8N5I2 433 aa10.1□□□□□ -0.79
COL28A1-206ENST00000465339 TMEM229BQ8NBD8 167 aa10.1□□□□□ -0.79
COL28A1-206ENST00000465339 DGCR14Q96DF8 476 aaKnown RBP10.1□□□□□ -0.79
COL28A1-206ENST00000465339 TINAGL1Q9GZM7 467 aaPredicted RBP10.1□□□□□ -0.79
COL28A1-206ENST00000465339 C6orf62Q9GZU0 229 aaPredicted RBP10.1□□□□□ -0.79
COL28A1-206ENST00000465339 FXYD6Q9H0Q3 95 aa10.1□□□□□ -0.79
COL28A1-206ENST00000465339 COMMD9Q9P000 198 aa10.1□□□□□ -0.79
COL28A1-206ENST00000465339 ZMAT5Q9UDW3 170 aaKnown RBP10.1□□□□□ -0.79
COL28A1-206ENST00000465339 C13orf42A0A1B0GVH6 325 aa10.09□□□□□ -0.79
COL28A1-206ENST00000465339 CCDC160A6NGH7 325 aa10.09□□□□□ -0.79
COL28A1-206ENST00000465339 LINC01619G3V211 115 aa10.09□□□□□ -0.79
COL28A1-206ENST00000465339 M0QYG6 137 aa10.09□□□□□ -0.79
COL28A1-206ENST00000465339 CD74P04233 296 aa10.09□□□□□ -0.79
COL28A1-206ENST00000465339 CD3DP04234 171 aa10.09□□□□□ -0.79
COL28A1-206ENST00000465339 HSPB1P04792 205 aaKnown RBP10.09□□□□□ -0.79
COL28A1-206ENST00000465339 RLN1P04808 185 aa10.09□□□□□ -0.79
COL28A1-206ENST00000465339 FGF2P09038 288 aa10.09□□□□□ -0.79
COL28A1-206ENST00000465339 TAS2R19P59542 299 aa10.09□□□□□ -0.79
COL28A1-206ENST00000465339 RPL8P62917 257 aaKnown RBP10.09□□□□□ -0.79
COL28A1-206ENST00000465339 IL18Q14116 193 aa10.09□□□□□ -0.79
COL28A1-206ENST00000465339 SLC25A42Q86VD7 318 aa10.09□□□□□ -0.79
COL28A1-206ENST00000465339 SLC38A6Q8IZM9 456 aa10.09□□□□□ -0.79
COL28A1-206ENST00000465339 CADM3Q8N126 398 aa10.09□□□□□ -0.79
COL28A1-206ENST00000465339 TTC9CQ8N5M4 171 aa10.09□□□□□ -0.79
COL28A1-206ENST00000465339 ADAD2Q8NCV1 583 aaKnown RBP10.09□□□□□ -0.79
COL28A1-206ENST00000465339 DMBX1Q8NFW5 382 aa10.09□□□□□ -0.79
COL28A1-206ENST00000465339 MCFD2Q8NI22 146 aa10.09□□□□□ -0.79
COL28A1-206ENST00000465339 USMG5Q96IX5 58 aa10.09□□□□□ -0.79
COL28A1-206ENST00000465339 NXF2Q9GZY0 626 aaKnown RBP10.09□□□□□ -0.79
COL28A1-206ENST00000465339 HRASLSQ9HDD0 168 aa10.09□□□□□ -0.79
COL28A1-206ENST00000465339 FAM212BQ9NTI7 297 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms