RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 COQ2Q96H96 371 aa10.47□□□□□ -0.73
CLCNKA-204ENST00000464764 GNB4Q9HAV0 340 aa10.47□□□□□ -0.73
CLCNKA-204ENST00000464764 LOXL2Q9Y4K0 774 aa10.47□□□□□ -0.73
CLCNKA-204ENST00000464764 CFAP47Q6ZTR5 3102 aa10.46□□□□□ -0.73
CLCNKA-204ENST00000464764 PCSK5Q92824 1860 aa10.46□□□□□ -0.73
CLCNKA-204ENST00000464764 MED13Q9UHV7 2174 aa10.46□□□□□ -0.73
CLCNKA-204ENST00000464764 FCGR3BO75015 233 aa10.46□□□□□ -0.73
CLCNKA-204ENST00000464764 PROP1O75360 226 aa10.46□□□□□ -0.73
CLCNKA-204ENST00000464764 TCL1AP56279 114 aa10.46□□□□□ -0.73
CLCNKA-204ENST00000464764 TMEM183BQ1AE95 376 aa10.46□□□□□ -0.73
CLCNKA-204ENST00000464764 TIPARPQ7Z3E1 657 aaKnown RBP10.46□□□□□ -0.73
CLCNKA-204ENST00000464764 NINJ1Q92982 152 aa10.46□□□□□ -0.73
CLCNKA-204ENST00000464764 C1orf159Q96HA4 380 aa10.46□□□□□ -0.73
CLCNKA-204ENST00000464764 RCHY1Q96PM5 261 aa10.46□□□□□ -0.73
CLCNKA-204ENST00000464764 CIB3Q96Q77 187 aaPredicted RBP10.46□□□□□ -0.73
CLCNKA-204ENST00000464764 IL6RP08887 468 aaPredicted RBP10.46□□□□□ -0.74
CLCNKA-204ENST00000464764 PAFAH1B2P68402 229 aa10.46□□□□□ -0.74
CLCNKA-204ENST00000464764 FOXF2Q12947 444 aa10.46□□□□□ -0.74
CLCNKA-204ENST00000464764 PRR31Q5SQ13 230 aa10.46□□□□□ -0.74
CLCNKA-204ENST00000464764 OR13A1Q8NGR1 328 aa10.46□□□□□ -0.74
CLCNKA-204ENST00000464764 BTF3L4Q96K17 158 aa10.46□□□□□ -0.74
CLCNKA-204ENST00000464764 ZNF703Q9H7S9 590 aaPredicted RBP10.46□□□□□ -0.74
CLCNKA-204ENST00000464764 HEYLQ9NQ87 328 aaPredicted RBP10.46□□□□□ -0.74
CLCNKA-204ENST00000464764 IL36BQ9NZH7 164 aa10.46□□□□□ -0.74
CLCNKA-204ENST00000464764 TMEM30CPA0ZSE6 113 aa10.45□□□□□ -0.74
CLCNKA-204ENST00000464764 STAG3L2P0CL84 134 aa10.45□□□□□ -0.74
CLCNKA-204ENST00000464764 STAG3L3P0CL85 134 aa10.45□□□□□ -0.74
CLCNKA-204ENST00000464764 FXYD3Q14802 87 aa10.45□□□□□ -0.74
CLCNKA-204ENST00000464764 GGTLC1Q9BX51 225 aa10.45□□□□□ -0.74
CLCNKA-204ENST00000464764 OPN3Q9H1Y3 402 aaPredicted RBP10.45□□□□□ -0.74
CLCNKA-204ENST00000464764 GP6Q9HCN6 339 aa10.45□□□□□ -0.74
CLCNKA-204ENST00000464764 AHRRA9YTQ3 701 aa10.45□□□□□ -0.74
CLCNKA-204ENST00000464764 SIAH2O43255 324 aa10.45□□□□□ -0.74
CLCNKA-204ENST00000464764 ACTL6BO94805 426 aa10.45□□□□□ -0.74
CLCNKA-204ENST00000464764 PMCHP20382 165 aa10.45□□□□□ -0.74
CLCNKA-204ENST00000464764 LINC00696Q6ZRV3 163 aa10.45□□□□□ -0.74
CLCNKA-204ENST00000464764 MMD2Q8IY49 270 aa10.45□□□□□ -0.74
CLCNKA-204ENST00000464764 ATOH7Q8N100 152 aa10.45□□□□□ -0.74
CLCNKA-204ENST00000464764 C11orf42Q8N5U0 333 aa10.45□□□□□ -0.74
CLCNKA-204ENST00000464764 Q8N976 141 aa10.45□□□□□ -0.74
CLCNKA-204ENST00000464764 Q8TCH9 128 aa10.45□□□□□ -0.74
CLCNKA-204ENST00000464764 FZR1Q9UM11 496 aa10.45□□□□□ -0.74
CLCNKA-204ENST00000464764 TNRC6BQ9UPQ9 1833 aaKnown RBP10.45□□□□□ -0.74
CLCNKA-204ENST00000464764 BOD1L1Q8NFC6 3051 aa10.45□□□□□ -0.74
CLCNKA-204ENST00000464764 LGALS4P56470 323 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 ZNF718Q3SXZ3 478 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 DOLPP1Q86YN1 238 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 FAM19A2Q8N3H0 131 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 STPG4Q8N801 248 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 FAM122AQ96E09 287 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 WNT10AQ9GZT5 417 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 RNASE7Q9H1E1 156 aaKnown RBP10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 BOKQ9UMX3 212 aaPredicted RBP10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 POLDIP2Q9Y2S7 368 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 ABCA1O95477 2261 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 HCFC1P51610 2035 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 ZNF318Q5VUA4 2279 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 DIRC3C9JPN6 131 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 RAB7AP51149 207 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 MAJINQ3KP22 176 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 UTF1Q5T230 341 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 ERASQ7Z444 233 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 SIGLECL1Q8N7X8 197 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 SLC25A40Q8TBP6 338 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 UHRF2Q96PU4 802 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 OBP2BQ9NPH6 170 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 TBL2Q9Y4P3 447 aaKnown RBP10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 NCOR1O75376 2440 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 ROS1P08922 2347 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 CGAP01215 116 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 GPX1P07203 203 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 MPV17P39210 176 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 GAGE1Q13065 139 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 EDDM3AQ14507 147 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 PRAMEF6Q5VXH4 476 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 ZBTB34Q8NCN2 500 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 RAB1CQ92928 201 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 NAT8BQ9UHF3 227 aa10.44□□□□□ -0.74
CLCNKA-204ENST00000464764 CXorf1O96002 111 aa10.43□□□□□ -0.74
CLCNKA-204ENST00000464764 MYOD1P15172 320 aa10.43□□□□□ -0.74
CLCNKA-204ENST00000464764 GCHFRP30047 84 aa10.43□□□□□ -0.74
CLCNKA-204ENST00000464764 OR1C1Q15619 314 aa10.43□□□□□ -0.74
CLCNKA-204ENST00000464764 ZNF766Q5HY98 468 aa10.43□□□□□ -0.74
CLCNKA-204ENST00000464764 PRAMEF5Q5TYX0 476 aa10.43□□□□□ -0.74
CLCNKA-204ENST00000464764 OR4P4Q8NGL7 312 aa10.43□□□□□ -0.74
CLCNKA-204ENST00000464764 CT55Q8WUE5 264 aa10.43□□□□□ -0.74
CLCNKA-204ENST00000464764 TTTY12Q9BZ98 90 aa10.43□□□□□ -0.74
CLCNKA-204ENST00000464764 DNAJC4Q9NNZ3 241 aa10.43□□□□□ -0.74
CLCNKA-204ENST00000464764 FOXJ2Q9P0K8 574 aa10.43□□□□□ -0.74
CLCNKA-204ENST00000464764 HEATR1Q9H583 2144 aaKnown RBP10.43□□□□□ -0.74
CLCNKA-204ENST00000464764 OOEPA6NGQ2 149 aa10.43□□□□□ -0.74
CLCNKA-204ENST00000464764 AMTP48728 403 aa10.43□□□□□ -0.74
CLCNKA-204ENST00000464764 RANP62826 216 aaKnown RBP10.43□□□□□ -0.74
CLCNKA-204ENST00000464764 RPL39P5Q59GN2 51 aa10.43□□□□□ -0.74
CLCNKA-204ENST00000464764 TMEM251Q8N6I4 163 aa10.43□□□□□ -0.74
CLCNKA-204ENST00000464764 BCL2L2Q92843 193 aaPredicted RBP10.43□□□□□ -0.74
CLCNKA-204ENST00000464764 NRN1Q9NPD7 142 aa10.43□□□□□ -0.74
CLCNKA-204ENST00000464764 TNCP24821 2201 aa10.43□□□□□ -0.74
CLCNKA-204ENST00000464764 TET2Q6N021 2002 aaPredicted RBP10.42□□□□□ -0.74
CLCNKA-204ENST00000464764 ZDBF2Q9HCK1 2354 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms