RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 ZNF585BQ52M93 769 aa3.26□□□□□ -1.89
CCNL1-204ENST00000464316 BVES-AS1Q5T3Y7 98 aa3.26□□□□□ -1.89
CCNL1-204ENST00000464316 C9orf135Q5VTT2 229 aa3.26□□□□□ -1.89
CCNL1-204ENST00000464316 LCN12Q6JVE5 192 aa3.26□□□□□ -1.89
CCNL1-204ENST00000464316 ATP5L2Q7Z4Y8 100 aa3.26□□□□□ -1.89
CCNL1-204ENST00000464316 ZNF114Q8NC26 417 aa3.26□□□□□ -1.89
CCNL1-204ENST00000464316 OR2K2Q8NGT1 345 aa3.26□□□□□ -1.89
CCNL1-204ENST00000464316 OR1L3Q8NH93 324 aa3.26□□□□□ -1.89
CCNL1-204ENST00000464316 OR1L1Q8NH94 360 aa3.26□□□□□ -1.89
CCNL1-204ENST00000464316 CYYR1Q96J86 154 aa3.26□□□□□ -1.89
CCNL1-204ENST00000464316 LRRC61Q9BV99 259 aa3.26□□□□□ -1.89
CCNL1-204ENST00000464316 TDRD6O60522 2096 aaKnown RBP3.26□□□□□ -1.89
CCNL1-204ENST00000464316 CHD3Q12873 2000 aaKnown RBP3.26□□□□□ -1.89
CCNL1-204ENST00000464316 A0A1W2PQF6 199 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 OR2T8A6NH00 312 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.25□□□□□ -1.89
CCNL1-204ENST00000464316 J3QT63 122 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 CHEK1O14757 476 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 TAX1BP3O14907 124 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 SPINT2O43291 252 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 GALR2O43603 387 aaPredicted RBP3.25□□□□□ -1.89
CCNL1-204ENST00000464316 NGFP01138 241 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 ATP5IP56385 69 aaPredicted RBP3.25□□□□□ -1.89
CCNL1-204ENST00000464316 RELBQ01201 579 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 RBPJQ06330 500 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 TNXAQ16473 311 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 TBR1Q16650 682 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 NRN1LQ496H8 165 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 MIC13Q5XKP0 118 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 PARM1Q6UWI2 310 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 C18orf32Q8TCD1 76 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 ZNF501Q96CX3 271 aaPredicted RBP3.25□□□□□ -1.89
CCNL1-204ENST00000464316 C1QTNF5Q9BXJ0 243 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 C1RLQ9NZP8 487 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 IL36RNQ9UBH0 155 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 V9GYV3 84 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 NUP210LQ5VU65 1888 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 IGHV3-15A0A0B4J1V0 119 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 IGKV1-6A0A0C4DH72 117 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 MUC21A0A0G2JKD1 596 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.25□□□□□ -1.89
CCNL1-204ENST00000464316 MUC21A0A140T8X8 626 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 FAM90A9PA6NNJ1 464 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 A8MWL6 223 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 IGKV1-39P01597 117 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 IGKV1D-39P04432 117 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 COL9A1P20849 921 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 CA7P43166 264 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 CAMPP49913 170 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 RPS16P62249 146 aaKnown RBP3.25□□□□□ -1.89
CCNL1-204ENST00000464316 SLC35B1P78383 322 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 TMEM97Q5BJF2 176 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 MUC21Q5SSG8 566 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 C1orf53Q5VUE5 145 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 TRAT1Q6PIZ9 186 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 ZNF295-AS1Q8N0V1 137 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 PPP1R35Q8TAP8 253 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 WIPF2Q8TF74 440 aaPredicted RBP3.25□□□□□ -1.89
CCNL1-204ENST00000464316 OR1A1Q9P1Q5 309 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 DUSP13Q9UII6 198 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 RARRES3Q9UL19 164 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 LRRK1Q38SD2 2015 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 A0A1W2PRE2 83 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 C5orf49A4QMS7 147 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 OOEPA6NGQ2 149 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 H3BRM9 83 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 SYS1-DBNDD2H3BUS1 97 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 NEURL1O76050 574 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 IGLC1P0CG04 106 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 KIR2DS2P43631 304 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 PRSS12P56730 875 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 KLF5Q13887 457 aaPredicted RBP3.25□□□□□ -1.89
CCNL1-204ENST00000464316 CDCP2Q5VXM1 449 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 WDR74Q6RFH5 385 aaPredicted RBP3.25□□□□□ -1.89
CCNL1-204ENST00000464316 Q6ZVH6 145 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 DOLPP1Q86YN1 238 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 Q8N976 141 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 OR1B1Q8NGR6 318 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 OR10AG1Q8NH19 301 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 SSMEM1Q8WWF3 244 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 NANOS1Q8WY41 292 aaKnown RBP3.25□□□□□ -1.89
CCNL1-204ENST00000464316 C5orf30Q96GV9 206 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 ADTRPQ96IZ2 230 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 PRRG4Q9BZD6 226 aa3.25□□□□□ -1.89
CCNL1-204ENST00000464316 YLPM1P49750 1951 aaKnown RBP3.25□□□□□ -1.89
CCNL1-204ENST00000464316 KNL1Q8NG31 2342 aa3.24□□□□□ -1.89
CCNL1-204ENST00000464316 A0A1W2PPC4 97 aa3.24□□□□□ -1.89
CCNL1-204ENST00000464316 F2Z2F3 143 aa3.24□□□□□ -1.89
CCNL1-204ENST00000464316 LMO7DNF2Z398 122 aa3.24□□□□□ -1.89
CCNL1-204ENST00000464316 G3V3Y1 287 aa3.24□□□□□ -1.89
CCNL1-204ENST00000464316 G3V4G9 280 aa3.24□□□□□ -1.89
CCNL1-204ENST00000464316 M0R296 226 aa3.24□□□□□ -1.89
CCNL1-204ENST00000464316 P04436 131 aa3.24□□□□□ -1.89
CCNL1-204ENST00000464316 PATE4P0C8F1 98 aa3.24□□□□□ -1.89
CCNL1-204ENST00000464316 LINC00310P59036 64 aa3.24□□□□□ -1.89
CCNL1-204ENST00000464316 FXYD3Q14802 87 aa3.24□□□□□ -1.89
CCNL1-204ENST00000464316 SLC22A18ASQ8N1D0 253 aa3.24□□□□□ -1.89
CCNL1-204ENST00000464316 FADS6Q8N9I5 356 aa3.24□□□□□ -1.89
CCNL1-204ENST00000464316 OR4F17Q8NGA8 305 aa3.24□□□□□ -1.89
CCNL1-204ENST00000464316 OR52E5Q8NH55 327 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms