RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 DCTN2Q13561 401 aaKnown RBP12.53□□□□□ -0.4
COL1A1-202ENST00000463440 AADACL3Q5VUY0 350 aa12.53□□□□□ -0.4
COL1A1-202ENST00000463440 ADAD2Q8NCV1 583 aaKnown RBP12.53□□□□□ -0.4
COL1A1-202ENST00000463440 OR6F1Q8NGZ6 308 aa12.53□□□□□ -0.4
COL1A1-202ENST00000463440 CD300LFQ8TDQ1 290 aa12.53□□□□□ -0.4
COL1A1-202ENST00000463440 USMG5Q96IX5 58 aa12.53□□□□□ -0.4
COL1A1-202ENST00000463440 RANGRFQ9HD47 186 aaPredicted RBP12.53□□□□□ -0.4
COL1A1-202ENST00000463440 SCOCQ9UIL1 159 aa12.53□□□□□ -0.4
COL1A1-202ENST00000463440 ADAM30Q9UKF2 790 aa12.53□□□□□ -0.4
COL1A1-202ENST00000463440 DNAH3Q8TD57 4116 aa12.53□□□□□ -0.4
COL1A1-202ENST00000463440 HPRT1P00492 218 aa12.52□□□□□ -0.41
COL1A1-202ENST00000463440 RCVRNP35243 200 aa12.52□□□□□ -0.41
COL1A1-202ENST00000463440 ECI1P42126 302 aa12.52□□□□□ -0.41
COL1A1-202ENST00000463440 SSX9Q7RTT3 188 aa12.52□□□□□ -0.41
COL1A1-202ENST00000463440 ZNF429Q86V71 674 aa12.52□□□□□ -0.41
COL1A1-202ENST00000463440 SLC25A42Q86VD7 318 aa12.52□□□□□ -0.41
COL1A1-202ENST00000463440 LYSMD2Q8IV50 215 aa12.52□□□□□ -0.41
COL1A1-202ENST00000463440 OR51H1Q8NH63 302 aa12.52□□□□□ -0.41
COL1A1-202ENST00000463440 OR4A5Q8NH83 315 aa12.52□□□□□ -0.41
COL1A1-202ENST00000463440 ZP3P21754 424 aa12.51□□□□□ -0.41
COL1A1-202ENST00000463440 RPL27AP46776 148 aaKnown RBP12.51□□□□□ -0.41
COL1A1-202ENST00000463440 TAS2R31P59538 309 aa12.51□□□□□ -0.41
COL1A1-202ENST00000463440 TSPAN5P62079 268 aa12.51□□□□□ -0.41
COL1A1-202ENST00000463440 RPL8P62917 257 aaKnown RBP12.51□□□□□ -0.41
COL1A1-202ENST00000463440 C10orf55Q5SWW7 151 aa12.51□□□□□ -0.41
COL1A1-202ENST00000463440 CMTM1Q8IZ96 169 aa12.51□□□□□ -0.41
COL1A1-202ENST00000463440 TTC9CQ8N5M4 171 aa12.51□□□□□ -0.41
COL1A1-202ENST00000463440 HRASLSQ9HDD0 168 aa12.51□□□□□ -0.41
COL1A1-202ENST00000463440 BET1LQ9NYM9 111 aa12.51□□□□□ -0.41
COL1A1-202ENST00000463440 ANKRD34BA5PLL1 514 aa12.5□□□□□ -0.41
COL1A1-202ENST00000463440 DPPA5A6NC42 116 aa12.5□□□□□ -0.41
COL1A1-202ENST00000463440 FAM223BA6NKX1 122 aa12.5□□□□□ -0.41
COL1A1-202ENST00000463440 SAP30O75446 220 aa12.5□□□□□ -0.41
COL1A1-202ENST00000463440 NQO2P16083 231 aa12.5□□□□□ -0.41
COL1A1-202ENST00000463440 OR4A47Q6IF82 309 aa12.5□□□□□ -0.41
COL1A1-202ENST00000463440 LPCAT3Q6P1A2 487 aa12.5□□□□□ -0.41
COL1A1-202ENST00000463440 CLVS1Q8IUQ0 354 aaPredicted RBP12.5□□□□□ -0.41
COL1A1-202ENST00000463440 FAM223AQ8IWN6 122 aa12.5□□□□□ -0.41
COL1A1-202ENST00000463440 C15orf40Q8WUR7 153 aa12.5□□□□□ -0.41
COL1A1-202ENST00000463440 FYTTD1Q96QD9 318 aaKnown RBP12.5□□□□□ -0.41
COL1A1-202ENST00000463440 FXYD6Q9H0Q3 95 aa12.5□□□□□ -0.41
COL1A1-202ENST00000463440 PLEKHA2Q9HB19 425 aa12.5□□□□□ -0.41
COL1A1-202ENST00000463440 EXTL2Q9UBQ6 330 aa12.5□□□□□ -0.41
COL1A1-202ENST00000463440 HMX3A6NHT5 357 aa12.49□□□□□ -0.41
COL1A1-202ENST00000463440 GPR31O00270 319 aa12.49□□□□□ -0.41
COL1A1-202ENST00000463440 PGLYRP1O75594 196 aaPredicted RBP12.49□□□□□ -0.41
COL1A1-202ENST00000463440 TPPPO94811 219 aa12.49□□□□□ -0.41
COL1A1-202ENST00000463440 RLN1P04808 185 aa12.49□□□□□ -0.41
COL1A1-202ENST00000463440 HLA-GP17693 338 aa12.49□□□□□ -0.41
COL1A1-202ENST00000463440 S100GP29377 79 aa12.49□□□□□ -0.41
COL1A1-202ENST00000463440 RHOGP84095 191 aa12.49□□□□□ -0.41
COL1A1-202ENST00000463440 DEFA5Q01523 94 aa12.49□□□□□ -0.41
COL1A1-202ENST00000463440 SPCS2Q15005 226 aa12.49□□□□□ -0.41
COL1A1-202ENST00000463440 POU2AF1Q16633 256 aa12.49□□□□□ -0.41
COL1A1-202ENST00000463440 ZNF343Q6P1L6 599 aa12.49□□□□□ -0.41
COL1A1-202ENST00000463440 ACSM6Q6P461 480 aa12.49□□□□□ -0.41
COL1A1-202ENST00000463440 DMBX1Q8NFW5 382 aa12.49□□□□□ -0.41
COL1A1-202ENST00000463440 RAB2BQ8WUD1 216 aa12.49□□□□□ -0.41
COL1A1-202ENST00000463440 ELOVL1Q9BW60 279 aa12.49□□□□□ -0.41
COL1A1-202ENST00000463440 SLC2A9Q9NRM0 540 aa12.49□□□□□ -0.41
COL1A1-202ENST00000463440 COMMD9Q9P000 198 aa12.49□□□□□ -0.41
COL1A1-202ENST00000463440 PEF1Q9UBV8 284 aaKnown RBP12.49□□□□□ -0.41
COL1A1-202ENST00000463440 ZNF256Q9Y2P7 627 aaPredicted RBP12.49□□□□□ -0.41
COL1A1-202ENST00000463440 ZNF257Q9Y2Q1 563 aa12.49□□□□□ -0.41
COL1A1-202ENST00000463440 TRBV9A0A0B4J1U6 114 aa12.48□□□□□ -0.41
COL1A1-202ENST00000463440 TEX22C9J3V5 150 aa12.48□□□□□ -0.41
COL1A1-202ENST00000463440 RGS5O15539 181 aa12.48□□□□□ -0.41
COL1A1-202ENST00000463440 S1PR2O95136 353 aa12.48□□□□□ -0.41
COL1A1-202ENST00000463440 PRH1P02810 166 aa12.48□□□□□ -0.41
COL1A1-202ENST00000463440 IL6RP08887 468 aaPredicted RBP12.48□□□□□ -0.41
COL1A1-202ENST00000463440 ZNF735P0CB33 412 aa12.48□□□□□ -0.41
COL1A1-202ENST00000463440 F2RP25116 425 aa12.48□□□□□ -0.41
COL1A1-202ENST00000463440 TMBIM6P55061 237 aa12.48□□□□□ -0.41
COL1A1-202ENST00000463440 ERVK-16P61578 105 aa12.48□□□□□ -0.41
COL1A1-202ENST00000463440 ATP5G2Q06055 141 aa12.48□□□□□ -0.41
COL1A1-202ENST00000463440 RNASE12Q5GAN4 147 aaKnown RBP12.48□□□□□ -0.41
COL1A1-202ENST00000463440 OR4C12Q96R67 309 aa12.48□□□□□ -0.41
COL1A1-202ENST00000463440 PRR25Q96S07 402 aa12.48□□□□□ -0.41
COL1A1-202ENST00000463440 BCL7BQ9BQE9 202 aa12.48□□□□□ -0.41
COL1A1-202ENST00000463440 AKIP1Q9NQ31 210 aa12.48□□□□□ -0.41
COL1A1-202ENST00000463440 NPIPB5A8MRT5 1133 aa12.47□□□□□ -0.41
COL1A1-202ENST00000463440 UPK2O00526 184 aa12.47□□□□□ -0.41
COL1A1-202ENST00000463440 NOL3O60936 208 aaKnown RBP12.47□□□□□ -0.41
COL1A1-202ENST00000463440 LY86O95711 162 aa12.47□□□□□ -0.41
COL1A1-202ENST00000463440 DHFRP00374 187 aa12.47□□□□□ -0.41
COL1A1-202ENST00000463440 IFNA6P05013 189 aa12.47□□□□□ -0.41
COL1A1-202ENST00000463440 RPL5P46777 297 aaKnown RBP12.47□□□□□ -0.41
COL1A1-202ENST00000463440 ZNF45Q02386 682 aa12.47□□□□□ -0.41
COL1A1-202ENST00000463440 EXOSC2Q13868 293 aaKnown RBP12.47□□□□□ -0.41
COL1A1-202ENST00000463440 VAX1Q5SQQ9 334 aa12.47□□□□□ -0.41
COL1A1-202ENST00000463440 NECAP1Q8NC96 275 aa12.47□□□□□ -0.41
COL1A1-202ENST00000463440 DGCR14Q96DF8 476 aaKnown RBP12.47□□□□□ -0.41
COL1A1-202ENST00000463440 TMEM140Q9NV12 185 aa12.47□□□□□ -0.41
COL1A1-202ENST00000463440 KLK11Q9UBX7 282 aa12.47□□□□□ -0.41
COL1A1-202ENST00000463440 E7EUB6 86 aa12.46□□□□□ -0.41
COL1A1-202ENST00000463440 RBMXL2O75526 392 aaKnown RBP12.46□□□□□ -0.41
COL1A1-202ENST00000463440 FGF2P09038 288 aa12.46□□□□□ -0.41
COL1A1-202ENST00000463440 LPAR6P43657 344 aa12.46□□□□□ -0.41
COL1A1-202ENST00000463440 UCP3P55916 312 aa12.46□□□□□ -0.41
COL1A1-202ENST00000463440 KLF5Q13887 457 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms