RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 LOC105371267A0A1B0GV96 52 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 EIF3GO75821 320 aaKnown RBP eCLIP8.29□□□□□ -1.08
MSH5-211ENST00000463144 HAGHQ16775 308 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 ACSM6Q6P461 480 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 OR13D1Q8NGV5 346 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 ZNF596Q8TC21 504 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 MBD3L1Q8WWY6 194 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 PINX1Q96BK5 328 aaKnown RBP8.29□□□□□ -1.08
MSH5-211ENST00000463144 AIFM2Q9BRQ8 373 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 SLC35B3Q9H1N7 401 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 HEYLQ9NQ87 328 aaPredicted RBP8.29□□□□□ -1.08
MSH5-211ENST00000463144 FOXA2Q9Y261 457 aaPredicted RBP8.29□□□□□ -1.08
MSH5-211ENST00000463144 TIMM9Q9Y5J7 89 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 KPTNQ9Y664 436 aa8.29□□□□□ -1.08
MSH5-211ENST00000463144 ANKHD1Q8IWZ3 2542 aaKnown RBP8.29□□□□□ -1.08
MSH5-211ENST00000463144 PRSS46E5RG02 174 aa8.28□□□□□ -1.08
MSH5-211ENST00000463144 J3QR06 171 aa8.28□□□□□ -1.08
MSH5-211ENST00000463144 HRASP01112 189 aa8.28□□□□□ -1.08
MSH5-211ENST00000463144 IGHV2-70P01814 119 aa8.28□□□□□ -1.08
MSH5-211ENST00000463144 ELLP55199 621 aaPredicted RBP8.28□□□□□ -1.08
MSH5-211ENST00000463144 ICAM4Q14773 271 aa8.28□□□□□ -1.08
MSH5-211ENST00000463144 DHRS7BQ6IAN0 325 aaPredicted RBP8.28□□□□□ -1.08
MSH5-211ENST00000463144 RPP25LQ8N5L8 163 aaKnown RBP8.28□□□□□ -1.08
MSH5-211ENST00000463144 Q8N7P7 452 aa8.28□□□□□ -1.08
MSH5-211ENST00000463144 CLDND2Q8NHS1 167 aa8.28□□□□□ -1.08
MSH5-211ENST00000463144 ST6GALNAC6Q969X2 333 aa8.28□□□□□ -1.08
MSH5-211ENST00000463144 RCC1LQ96I51 464 aaKnown RBP8.28□□□□□ -1.08
MSH5-211ENST00000463144 LY6HO94772 140 aa8.28□□□□□ -1.08
MSH5-211ENST00000463144 IFNA10P01566 189 aa8.28□□□□□ -1.08
MSH5-211ENST00000463144 FBP1P09467 338 aa8.28□□□□□ -1.08
MSH5-211ENST00000463144 OR13C7P0DN81 318 aa8.28□□□□□ -1.08
MSH5-211ENST00000463144 SFTPCP11686 197 aa8.28□□□□□ -1.08
MSH5-211ENST00000463144 FGF7P21781 194 aa8.28□□□□□ -1.08
MSH5-211ENST00000463144 REG1BP48304 166 aa8.28□□□□□ -1.08
MSH5-211ENST00000463144 PPOXP50336 477 aa8.28□□□□□ -1.08
MSH5-211ENST00000463144 RAB2AP61019 212 aa8.28□□□□□ -1.08
MSH5-211ENST00000463144 HSPE1P61604 102 aaKnown RBP8.28□□□□□ -1.08
MSH5-211ENST00000463144 TMEM41BQ5BJD5 291 aa8.28□□□□□ -1.08
MSH5-211ENST00000463144 LCN15Q6UWW0 184 aa8.28□□□□□ -1.08
MSH5-211ENST00000463144 ETV3LQ6ZN32 361 aa8.28□□□□□ -1.08
MSH5-211ENST00000463144 LINC00311Q8N616 119 aa8.28□□□□□ -1.08
MSH5-211ENST00000463144 C8orf31Q8N9H6 132 aa8.28□□□□□ -1.08
MSH5-211ENST00000463144 A0A087X0M5 115 aa8.27□□□□□ -1.09
MSH5-211ENST00000463144 A0A1B0GX30 115 aa8.27□□□□□ -1.09
MSH5-211ENST00000463144 H0YJW9 148 aa8.27□□□□□ -1.09
MSH5-211ENST00000463144 UPK2O00526 184 aa8.27□□□□□ -1.09
MSH5-211ENST00000463144 LY86O95711 162 aa8.27□□□□□ -1.09
MSH5-211ENST00000463144 HBE1P02100 147 aa8.27□□□□□ -1.09
MSH5-211ENST00000463144 SRP19P09132 144 aaKnown RBP8.27□□□□□ -1.09
MSH5-211ENST00000463144 IGHV1-8P0DP01 117 aa8.27□□□□□ -1.09
MSH5-211ENST00000463144 FGF8P55075 233 aaPredicted RBP8.27□□□□□ -1.09
MSH5-211ENST00000463144 DLX1P56177 255 aa8.27□□□□□ -1.09
MSH5-211ENST00000463144 ZNF506Q5JVG8 444 aa8.27□□□□□ -1.09
MSH5-211ENST00000463144 AVPI1Q5T686 147 aa8.27□□□□□ -1.09
MSH5-211ENST00000463144 NPCDR1Q9BY65 106 aa8.27□□□□□ -1.09
MSH5-211ENST00000463144 SMDT1Q9H4I9 107 aa8.27□□□□□ -1.09
MSH5-211ENST00000463144 ABCA4P78363 2273 aa8.27□□□□□ -1.09
MSH5-211ENST00000463144 SCAF4O95104 1147 aaKnown RBP8.27□□□□□ -1.09
MSH5-211ENST00000463144 FSTL3O95633 263 aa8.27□□□□□ -1.09
MSH5-211ENST00000463144 SOD3P08294 240 aa8.27□□□□□ -1.09
MSH5-211ENST00000463144 HOXA1P49639 335 aaPredicted RBP8.27□□□□□ -1.09
MSH5-211ENST00000463144 RTL8BQ17RB0 113 aa8.27□□□□□ -1.09
MSH5-211ENST00000463144 C11orf71Q6IPW1 123 aa8.27□□□□□ -1.09
MSH5-211ENST00000463144 OR5AN1Q8NGI8 311 aa8.27□□□□□ -1.09
MSH5-211ENST00000463144 NABP2Q9BQ15 211 aa8.27□□□□□ -1.09
MSH5-211ENST00000463144 RALYQ9UKM9 306 aaKnown RBP8.27□□□□□ -1.09
MSH5-211ENST00000463144 WDR83OSQ9Y284 106 aa8.27□□□□□ -1.09
MSH5-211ENST00000463144 OR51B2Q9Y5P1 312 aa8.27□□□□□ -1.09
MSH5-211ENST00000463144 A0A1W2PPR1 153 aa8.26□□□□□ -1.09
MSH5-211ENST00000463144 SAA1P0DJI8 122 aaPredicted RBP8.26□□□□□ -1.09
MSH5-211ENST00000463144 CD1BP29016 333 aa8.26□□□□□ -1.09
MSH5-211ENST00000463144 UQCRFS1P47985 274 aa8.26□□□□□ -1.09
MSH5-211ENST00000463144 ZNF787Q6DD87 383 aa8.26□□□□□ -1.09
MSH5-211ENST00000463144 OR10X1Q8NGY0 326 aa8.26□□□□□ -1.09
MSH5-211ENST00000463144 RXFP4Q8TDU9 374 aa8.26□□□□□ -1.09
MSH5-211ENST00000463144 C1orf159Q96HA4 380 aa8.26□□□□□ -1.09
MSH5-211ENST00000463144 CLCC1Q96S66 551 aa8.26□□□□□ -1.09
MSH5-211ENST00000463144 CBLN4Q9NTU7 201 aa8.26□□□□□ -1.09
MSH5-211ENST00000463144 TRBV23-1A0A0A0MS06 115 aa8.26□□□□□ -1.09
MSH5-211ENST00000463144 TEX50A0A1B0GTY4 177 aa8.26□□□□□ -1.09
MSH5-211ENST00000463144 LOC102723971A0A1B0GUV8 181 aa8.26□□□□□ -1.09
MSH5-211ENST00000463144 OPN1MWP04001 364 aa8.26□□□□□ -1.09
MSH5-211ENST00000463144 OPN1MW2P0DN77 364 aa8.26□□□□□ -1.09
MSH5-211ENST00000463144 OPN1MW3P0DN78 364 aa8.26□□□□□ -1.09
MSH5-211ENST00000463144 ATF4P18848 351 aaPredicted RBP8.26□□□□□ -1.09
MSH5-211ENST00000463144 AKR1C3P42330 323 aa8.26□□□□□ -1.09
MSH5-211ENST00000463144 ZNF137PP52743 207 aa8.26□□□□□ -1.09
MSH5-211ENST00000463144 RPP30P78346 268 aaKnown RBP8.26□□□□□ -1.09
MSH5-211ENST00000463144 PRB3Q04118 309 aaPredicted RBP8.26□□□□□ -1.09
MSH5-211ENST00000463144 TMEM177Q53S58 311 aa8.26□□□□□ -1.09
MSH5-211ENST00000463144 OR9G1Q8NH87 305 aa8.26□□□□□ -1.09
MSH5-211ENST00000463144 TMEM133Q9H2Q1 129 aa8.26□□□□□ -1.09
MSH5-211ENST00000463144 BET1LQ9NYM9 111 aa8.26□□□□□ -1.09
MSH5-211ENST00000463144 GNG13Q9P2W3 67 aa8.26□□□□□ -1.09
MSH5-211ENST00000463144 PRNDQ9UKY0 176 aa8.26□□□□□ -1.09
MSH5-211ENST00000463144 HIVEP3Q5T1R4 2406 aa8.25□□□□□ -1.09
MSH5-211ENST00000463144 MAP1LC3B2A6NCE7 125 aa8.25□□□□□ -1.09
MSH5-211ENST00000463144 H7C2Y5 167 aa8.25□□□□□ -1.09
MSH5-211ENST00000463144 KBTBD11O94819 623 aa8.25□□□□□ -1.09
MSH5-211ENST00000463144 AWAT1Q58HT5 328 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 168.4 ms