RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-222	ENST00000461849	LGALS7	P47929	136 aa		10.88	□□□□□ -0.67
RBM39-222	ENST00000461849	MECP2	P51608	486 aa	Known RBP	10.88	□□□□□ -0.67
RBM39-222	ENST00000461849	BRWD1-AS2	P59051	145 aa		10.88	□□□□□ -0.67
RBM39-222	ENST00000461849	RPL23A	P62750	156 aa	Known RBP	10.88	□□□□□ -0.67
RBM39-222	ENST00000461849	DHODH	Q02127	395 aa		10.88	□□□□□ -0.67
RBM39-222	ENST00000461849	TEX38	Q6PEX7	206 aa		10.88	□□□□□ -0.67
RBM39-222	ENST00000461849	NRARP	Q7Z6K4	114 aa		10.88	□□□□□ -0.67
RBM39-222	ENST00000461849	TMED4	Q7Z7H5	227 aa		10.88	□□□□□ -0.67
RBM39-222	ENST00000461849	SGPP2	Q8IWX5	399 aa		10.88	□□□□□ -0.67
RBM39-222	ENST00000461849	SPAG16	Q8N0X2	631 aa		10.88	□□□□□ -0.67
RBM39-222	ENST00000461849	ADAD2	Q8NCV1	583 aa	Known RBP	10.88	□□□□□ -0.67
RBM39-222	ENST00000461849	TMEM230	Q96A57	120 aa		10.88	□□□□□ -0.67
RBM39-222	ENST00000461849	GALNT14	Q96FL9	552 aa		10.88	□□□□□ -0.67
RBM39-222	ENST00000461849	GPHA2	Q96T91	129 aa		10.88	□□□□□ -0.67
RBM39-222	ENST00000461849	NAA60	Q9H7X0	242 aa		10.88	□□□□□ -0.67
RBM39-222	ENST00000461849	PLEKHA2	Q9HB19	425 aa		10.88	□□□□□ -0.67
RBM39-222	ENST00000461849	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	10.87	□□□□□ -0.67
RBM39-222	ENST00000461849	CRYZL1	O95825	349 aa		10.87	□□□□□ -0.67
RBM39-222	ENST00000461849	HPRT1	P00492	218 aa		10.87	□□□□□ -0.67
RBM39-222	ENST00000461849	RPA2	P15927	270 aa		10.87	□□□□□ -0.67
RBM39-222	ENST00000461849		Q8N9W7	124 aa		10.87	□□□□□ -0.67
RBM39-222	ENST00000461849	KLHL30-AS1	Q8NEE0	82 aa		10.87	□□□□□ -0.67
RBM39-222	ENST00000461849	NPB	Q8NG41	125 aa		10.87	□□□□□ -0.67
RBM39-222	ENST00000461849	DPF1	Q92782	380 aa		10.87	□□□□□ -0.67
RBM39-222	ENST00000461849	TSNAX	Q99598	290 aa	Known RBP	10.87	□□□□□ -0.67
RBM39-222	ENST00000461849	AIFM2	Q9BRQ8	373 aa		10.87	□□□□□ -0.67
RBM39-222	ENST00000461849	GPR61	Q9BZJ8	451 aa		10.87	□□□□□ -0.67
RBM39-222	ENST00000461849	NUDT15	Q9NV35	164 aa		10.87	□□□□□ -0.67
RBM39-222	ENST00000461849	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	10.87	□□□□□ -0.67
RBM39-222	ENST00000461849	COMMD9	Q9P000	198 aa		10.87	□□□□□ -0.67
RBM39-222	ENST00000461849	KCNIP3	Q9Y2W7	256 aa		10.87	□□□□□ -0.67
RBM39-222	ENST00000461849	PIGBOS1	A0A0B4J2F0	54 aa		10.86	□□□□□ -0.67
RBM39-222	ENST00000461849	ARPC1B	O15143	372 aa	Known RBP	10.86	□□□□□ -0.67
RBM39-222	ENST00000461849	RAMP3	O60896	148 aa		10.86	□□□□□ -0.67
RBM39-222	ENST00000461849	NDUFA3	O95167	84 aa		10.86	□□□□□ -0.67
RBM39-222	ENST00000461849	HRAS	P01112	189 aa		10.86	□□□□□ -0.67
RBM39-222	ENST00000461849	AKR1C4	P17516	323 aa		10.86	□□□□□ -0.67
RBM39-222	ENST00000461849	VDAC1	P21796	283 aa		10.86	□□□□□ -0.67
RBM39-222	ENST00000461849	UCP1	P25874	307 aa		10.86	□□□□□ -0.67
RBM39-222	ENST00000461849	SUPT4H1	P63272	117 aa	Known RBP	10.86	□□□□□ -0.67
RBM39-222	ENST00000461849	SRPX	P78539	464 aa		10.86	□□□□□ -0.67
RBM39-222	ENST00000461849	MMD	Q15546	238 aa		10.86	□□□□□ -0.67
RBM39-222	ENST00000461849	RGS21	Q2M5E4	152 aa		10.86	□□□□□ -0.67
RBM39-222	ENST00000461849	ZNF585B	Q52M93	769 aa		10.86	□□□□□ -0.67
RBM39-222	ENST00000461849	OR2B11	Q5JQS5	317 aa		10.86	□□□□□ -0.67
RBM39-222	ENST00000461849	PLET1	Q6UQ28	207 aa		10.86	□□□□□ -0.67
RBM39-222	ENST00000461849	C8orf86	Q6ZUL3	223 aa		10.86	□□□□□ -0.67
RBM39-222	ENST00000461849	CADM3	Q8N126	398 aa		10.86	□□□□□ -0.67
RBM39-222	ENST00000461849	HARBI1	Q96MB7	349 aa		10.86	□□□□□ -0.67
RBM39-222	ENST00000461849	TP53RK	Q96S44	253 aa		10.86	□□□□□ -0.67
RBM39-222	ENST00000461849	TMEM222	Q9H0R3	208 aa		10.86	□□□□□ -0.67
RBM39-222	ENST00000461849	FLVCR2	Q9UPI3	526 aa		10.86	□□□□□ -0.67
RBM39-222	ENST00000461849	DNAH3	Q8TD57	4116 aa		10.86	□□□□□ -0.67
RBM39-222	ENST00000461849	NOTCH3	Q9UM47	2321 aa		10.85	□□□□□ -0.67
RBM39-222	ENST00000461849	LINC01548	A6NM66	108 aa		10.85	□□□□□ -0.67
RBM39-222	ENST00000461849	SHOX	O15266	292 aa		10.85	□□□□□ -0.67
RBM39-222	ENST00000461849	NBR2	O15453	112 aa		10.85	□□□□□ -0.67
RBM39-222	ENST00000461849	SERPINE2	P07093	398 aa		10.85	□□□□□ -0.67
RBM39-222	ENST00000461849	H2AFB2	P0C5Z0	115 aa		10.85	□□□□□ -0.67
RBM39-222	ENST00000461849	ANXA3	P12429	323 aa		10.85	□□□□□ -0.67
RBM39-222	ENST00000461849	NQO2	P16083	231 aa		10.85	□□□□□ -0.67
RBM39-222	ENST00000461849	F2RL1	P55085	397 aa		10.85	□□□□□ -0.67
RBM39-222	ENST00000461849	RPS16	P62249	146 aa	Known RBP	10.85	□□□□□ -0.67
RBM39-222	ENST00000461849	POU2AF1	Q16633	256 aa		10.85	□□□□□ -0.67
RBM39-222	ENST00000461849	CXorf66	Q5JRM2	361 aa	Predicted RBP	10.85	□□□□□ -0.67
RBM39-222	ENST00000461849	ZNF695	Q8IW36	515 aa		10.85	□□□□□ -0.67
RBM39-222	ENST00000461849	MRPL41	Q8IXM3	137 aa	Known RBP	10.85	□□□□□ -0.67
RBM39-222	ENST00000461849	GLYATL2	Q8WU03	294 aa		10.85	□□□□□ -0.67
RBM39-222	ENST00000461849	MARVELD1	Q9BSK0	173 aa		10.85	□□□□□ -0.67
RBM39-222	ENST00000461849	MCRIP2	Q9BUT9	160 aa	Known RBP	10.85	□□□□□ -0.67
RBM39-222	ENST00000461849	PLSCR3	Q9NRY6	295 aa		10.85	□□□□□ -0.67
RBM39-222	ENST00000461849	RRH	O14718	337 aa		10.84	□□□□□ -0.67
RBM39-222	ENST00000461849	ATG12	O94817	140 aa		10.84	□□□□□ -0.67
RBM39-222	ENST00000461849	S1PR2	O95136	353 aa		10.84	□□□□□ -0.67
RBM39-222	ENST00000461849	SFT2D2	O95562	160 aa		10.84	□□□□□ -0.67
RBM39-222	ENST00000461849	CDS2	O95674	445 aa		10.84	□□□□□ -0.67
RBM39-222	ENST00000461849	IGLV2-23	P01705	113 aa		10.84	□□□□□ -0.67
RBM39-222	ENST00000461849	OR5AC1	P0C628	307 aa		10.84	□□□□□ -0.67
RBM39-222	ENST00000461849	ANXA7	P20073	488 aa	Known RBP	10.84	□□□□□ -0.67
RBM39-222	ENST00000461849	MYCNOS	P40205	109 aa		10.84	□□□□□ -0.67
RBM39-222	ENST00000461849	LPAR6	P43657	344 aa		10.84	□□□□□ -0.67
RBM39-222	ENST00000461849	UBE2K	P61086	200 aa		10.84	□□□□□ -0.67
RBM39-222	ENST00000461849	PPP1R1A	Q13522	171 aa		10.84	□□□□□ -0.67
RBM39-222	ENST00000461849	VMA21	Q3ZAQ7	101 aa		10.84	□□□□□ -0.67
RBM39-222	ENST00000461849	FAM71E2	Q8N5Q1	922 aa		10.84	□□□□□ -0.67
RBM39-222	ENST00000461849	LINC00482	Q8N8I6	264 aa		10.84	□□□□□ -0.67
RBM39-222	ENST00000461849	IL22RA2	Q969J5	263 aa		10.84	□□□□□ -0.67
RBM39-222	ENST00000461849	RITA1	Q96K30	269 aa		10.84	□□□□□ -0.67
RBM39-222	ENST00000461849	TMEM56	Q96MV1	263 aa		10.84	□□□□□ -0.67
RBM39-222	ENST00000461849	TMEM56-RWDD3	S4R434	201 aa		10.84	□□□□□ -0.67
RBM39-222	ENST00000461849	TRAV6	A0A075B6T7	132 aa		10.83	□□□□□ -0.68
RBM39-222	ENST00000461849	MARCH11	A6NNE9	402 aa		10.83	□□□□□ -0.68
RBM39-222	ENST00000461849	SRRM4	A7MD48	611 aa	Known RBP	10.83	□□□□□ -0.68
RBM39-222	ENST00000461849	PRAF2	O60831	178 aa		10.83	□□□□□ -0.68
RBM39-222	ENST00000461849	ELANE	P08246	267 aa		10.83	□□□□□ -0.68
RBM39-222	ENST00000461849	FGF2	P09038	288 aa		10.83	□□□□□ -0.68
RBM39-222	ENST00000461849	OR4E1	P0C645	316 aa		10.83	□□□□□ -0.68
RBM39-222	ENST00000461849	VAMP1	P23763	118 aa		10.83	□□□□□ -0.68
RBM39-222	ENST00000461849	RAB25	P57735	213 aa		10.83	□□□□□ -0.68
RBM39-222	ENST00000461849	TMEM187	Q14656	261 aa		10.83	□□□□□ -0.68

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