RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 NUP160Q12769 1436 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 GRIN2BQ13224 1484 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 VPS37CA5D8V6 355 aaPredicted RBP1.32□□□□□ -2.2
HDAC6-212ENST00000461608 C11orf86A6NJI1 115 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 OR4C45A6NMZ5 311 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 EVPLLA8MZ36 301 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 TMEM238C9JI98 176 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 FNDC10F2Z333 226 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 H0YJX3 145 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 TXNDC9O14530 226 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 CNIH1O95406 144 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 SERPINA1P01009 418 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 OR5G3P0C626 314 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 CCR7P32248 378 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 MARCKSL1P49006 195 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 RAP1GDS1P52306 607 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 EMP1P54849 157 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 ERVS71-1P61550 626 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 NAA20P61599 178 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 RANP62826 216 aaKnown RBP1.32□□□□□ -2.2
HDAC6-212ENST00000461608 FOXF1Q12946 379 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 RSU1Q15404 277 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 MIAQ16674 131 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 KRTAP6-3Q3LI67 103 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 Q6ZS52 159 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 C2orf91Q6ZV80 131 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 SPATA12Q7Z6I5 190 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 GPHB5Q86YW7 130 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 Q8NDZ9 215 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 OR2T27Q8NH04 317 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 RAB2BQ8WUD1 216 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 SLC7A6Q92536 515 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 IMP4Q96G21 291 aaKnown RBP1.32□□□□□ -2.2
HDAC6-212ENST00000461608 DIRAS2Q96HU8 199 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 CEP19Q96LK0 163 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 OR52B2Q96RD2 323 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 TTTY12Q9BZ98 90 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 GID8Q9NWU2 228 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 PAQR5Q9NXK6 330 aaPredicted RBP1.32□□□□□ -2.2
HDAC6-212ENST00000461608 SLC22A13Q9Y226 551 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 ANGPT4Q9Y264 503 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 EVC2Q86UK5 1308 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 PLCH2O75038 1416 aa1.32□□□□□ -2.2
HDAC6-212ENST00000461608 ERCC6Q03468 1493 aa1.31□□□□□ -2.2
HDAC6-212ENST00000461608 SLIT2O94813 1529 aa1.31□□□□□ -2.2
HDAC6-212ENST00000461608 SCRIBQ14160 1630 aa1.31□□□□□ -2.2
HDAC6-212ENST00000461608 IGHV3-64A0A075B6Q5 118 aa1.31□□□□□ -2.2
HDAC6-212ENST00000461608 TRAV41A0A0B4J266 112 aa1.31□□□□□ -2.2
HDAC6-212ENST00000461608 LOC105371267A0A1B0GV96 52 aa1.31□□□□□ -2.2
HDAC6-212ENST00000461608 BHLHE40O14503 412 aa1.31□□□□□ -2.2
HDAC6-212ENST00000461608 CREBL2O60519 120 aaPredicted RBP1.31□□□□□ -2.2
HDAC6-212ENST00000461608 REG1AP05451 166 aa1.31□□□□□ -2.2
HDAC6-212ENST00000461608 OR4E1P0C645 316 aa1.31□□□□□ -2.2
HDAC6-212ENST00000461608 PSMB8P28062 276 aa1.31□□□□□ -2.2
HDAC6-212ENST00000461608 REG1BP48304 166 aa1.31□□□□□ -2.2
HDAC6-212ENST00000461608 RAB14P61106 215 aa1.31□□□□□ -2.2
HDAC6-212ENST00000461608 SARNPP82979 210 aaKnown RBP1.31□□□□□ -2.2
HDAC6-212ENST00000461608 SRSF6Q13247 344 aaKnown RBP1.31□□□□□ -2.2
HDAC6-212ENST00000461608 TMED2Q15363 201 aa1.31□□□□□ -2.2
HDAC6-212ENST00000461608 LRRC75BQ2VPJ9 315 aa1.31□□□□□ -2.2
HDAC6-212ENST00000461608 OR10K2Q6IF99 312 aa1.31□□□□□ -2.2
HDAC6-212ENST00000461608 LYZL1Q6UWQ5 148 aa1.31□□□□□ -2.2
HDAC6-212ENST00000461608 Q6ZTI0 123 aa1.31□□□□□ -2.2
HDAC6-212ENST00000461608 SLC35F6Q8N357 371 aa1.31□□□□□ -2.2
HDAC6-212ENST00000461608 OR51D1Q8NGF3 324 aa1.31□□□□□ -2.2
HDAC6-212ENST00000461608 ASB17Q8WXJ9 295 aa1.31□□□□□ -2.2
HDAC6-212ENST00000461608 AP3S1Q92572 193 aa1.31□□□□□ -2.2
HDAC6-212ENST00000461608 PRAP1Q96NZ9 151 aa1.31□□□□□ -2.2
HDAC6-212ENST00000461608 OR52E6Q96RD3 313 aa1.31□□□□□ -2.2
HDAC6-212ENST00000461608 TXNDC17Q9BRA2 123 aa1.31□□□□□ -2.2
HDAC6-212ENST00000461608 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.31□□□□□ -2.2
HDAC6-212ENST00000461608 ZCCHC6Q5VYS8 1495 aaKnown RBP1.31□□□□□ -2.2
HDAC6-212ENST00000461608 IGLV3-9A0A075B6K5 115 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 A0A0J9YW62 118 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 E5RI56 91 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 H3BQV1 296 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 H3BRN7 92 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 PSMD12O00232 456 aaPredicted RBP1.3□□□□□ -2.2
HDAC6-212ENST00000461608 COX7A2LO14548 114 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 CIAO1O76071 339 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 IFNA16P05015 189 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 P0DMU3 169 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 FAM231AP0DMU4 169 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 FAM231CP0DMU5 169 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 HIST1H1EP10412 219 aaKnown RBP1.3□□□□□ -2.2
HDAC6-212ENST00000461608 KCNE1P15382 129 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 ALOX5APP20292 161 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 SULT1A1P50225 295 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 ARPC4P59998 168 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 ARF6P62330 175 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 CCL7P80098 99 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 PRDX4Q13162 271 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 MOGQ16653 247 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 GUK1Q16774 197 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 TNFAIP8L3Q5GJ75 292 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 SYPL2Q5VXT5 272 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 GLT8D1Q68CQ7 371 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 SLC35E3Q7Z769 313 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 TBC1D19Q8N5T2 526 aa1.3□□□□□ -2.2
HDAC6-212ENST00000461608 DEFB125Q8N687 156 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms