RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 TRAV41A0A0B4J266 112 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 MUC21A0A0G2JKD1 596 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 MUC21A0A140T8X8 626 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 J3QQQ9 107 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 BHLHE40O14503 412 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 PLA2G10O15496 165 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 ZNF705DP0CH99 300 aaPredicted RBP1.45□□□□□ -2.18
VCL-203ENST00000461383 ZNF728P0DKX0 622 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 CD79AP11912 226 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 S100A7P31151 101 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 CA5AP35218 305 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 CDKN2CP42773 168 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 CSN1S1P47710 185 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 OR4D2P58180 307 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 RPL26P61254 145 aaKnown RBP1.45□□□□□ -2.18
VCL-203ENST00000461383 POLR2GP62487 172 aaKnown RBP eCLIP1.45□□□□□ -2.18
VCL-203ENST00000461383 ZNF90Q03938 601 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 PMAIP1Q13794 54 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 FAM201AQ5SY85 155 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 GLT8D1Q68CQ7 371 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 ZNF705AQ6ZN79 300 aaPredicted RBP1.45□□□□□ -2.18
VCL-203ENST00000461383 OR1M1Q8NGA1 313 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 SGMS2Q8NHU3 365 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 ZNF675Q8TD23 568 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 TXNDC17Q9BRA2 123 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 RPL26L1Q9UNX3 145 aaKnown RBP1.45□□□□□ -2.18
VCL-203ENST00000461383 HHLA3Q9XRX5 114 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 TIMM9Q9Y5J7 89 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 FAM215AQ9Y5M1 114 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 CCDC88AQ3V6T2 1871 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 ITGB4P16144 1822 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 KIF13BQ9NQT8 1826 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 HIVEP2P31629 2446 aa1.45□□□□□ -2.18
VCL-203ENST00000461383 SNAPC4Q5SXM2 1469 aa1.44□□□□□ -2.18
VCL-203ENST00000461383 MALRD1Q5VYJ5 2156 aa1.44□□□□□ -2.18
VCL-203ENST00000461383 RFPL4AA6NLU0 287 aa1.44□□□□□ -2.18
VCL-203ENST00000461383 EEF1E1-BLOC1S5C9J1V9 151 aa1.44□□□□□ -2.18
VCL-203ENST00000461383 RFPL4AL1F8VTS6 287 aa1.44□□□□□ -2.18
VCL-203ENST00000461383 I3L521 148 aa1.44□□□□□ -2.18
VCL-203ENST00000461383 PSMD12O00232 456 aaPredicted RBP1.44□□□□□ -2.18
VCL-203ENST00000461383 LST1O00453 97 aa1.44□□□□□ -2.18
VCL-203ENST00000461383 SERPINA6P08185 405 aa1.44□□□□□ -2.18
VCL-203ENST00000461383 TMEM258P61165 79 aa1.44□□□□□ -2.18
VCL-203ENST00000461383 OR2F1Q13607 317 aa1.44□□□□□ -2.18
VCL-203ENST00000461383 GRK1Q15835 563 aa1.44□□□□□ -2.18
VCL-203ENST00000461383 MIAQ16674 131 aa1.44□□□□□ -2.18
VCL-203ENST00000461383 TNFAIP8L3Q5GJ75 292 aa1.44□□□□□ -2.18
VCL-203ENST00000461383 SSX8Q7RTT4 187 aa1.44□□□□□ -2.18
VCL-203ENST00000461383 ZNF565Q8N9K5 539 aa1.44□□□□□ -2.18
VCL-203ENST00000461383 ACOT12Q8WYK0 555 aa1.44□□□□□ -2.18
VCL-203ENST00000461383 SLC35B4Q969S0 331 aa1.44□□□□□ -2.18
VCL-203ENST00000461383 Q9BRP9 147 aa1.44□□□□□ -2.18
VCL-203ENST00000461383 ZNF471Q9BX82 626 aaPredicted RBP1.44□□□□□ -2.18
VCL-203ENST00000461383 TTTY12Q9BZ98 90 aa1.44□□□□□ -2.18
VCL-203ENST00000461383 OR51V1Q9H2C8 321 aa1.44□□□□□ -2.18
VCL-203ENST00000461383 VPS29Q9UBQ0 182 aa1.44□□□□□ -2.18
VCL-203ENST00000461383 SLIT2O94813 1529 aa1.44□□□□□ -2.18
VCL-203ENST00000461383 PLB1Q6P1J6 1458 aa1.43□□□□□ -2.18
VCL-203ENST00000461383 MDC1Q14676 2089 aaKnown RBP1.43□□□□□ -2.18
VCL-203ENST00000461383 A0A0J9YW62 118 aa1.43□□□□□ -2.18
VCL-203ENST00000461383 ARRDC5A6NEK1 342 aa1.43□□□□□ -2.18
VCL-203ENST00000461383 A8MUN3 132 aa1.43□□□□□ -2.18
VCL-203ENST00000461383 H3BRN7 92 aa1.43□□□□□ -2.18
VCL-203ENST00000461383 KRT75O95678 551 aa1.43□□□□□ -2.18
VCL-203ENST00000461383 SRP19P09132 144 aaKnown RBP1.43□□□□□ -2.18
VCL-203ENST00000461383 OR5G3P0C626 314 aa1.43□□□□□ -2.18
VCL-203ENST00000461383 PSMB8P28062 276 aa1.43□□□□□ -2.18
VCL-203ENST00000461383 PEBP1P30086 187 aaKnown RBP1.43□□□□□ -2.18
VCL-203ENST00000461383 EMP1P54849 157 aa1.43□□□□□ -2.18
VCL-203ENST00000461383 PSME3P61289 254 aa1.43□□□□□ -2.18
VCL-203ENST00000461383 TNFAIP6P98066 277 aaPredicted RBP1.43□□□□□ -2.18
VCL-203ENST00000461383 AESQ08117 197 aa1.43□□□□□ -2.18
VCL-203ENST00000461383 STX5Q13190 355 aa1.43□□□□□ -2.18
VCL-203ENST00000461383 SPA17Q15506 151 aa1.43□□□□□ -2.18
VCL-203ENST00000461383 C9orf64Q5T6V5 341 aa1.43□□□□□ -2.18
VCL-203ENST00000461383 SPOPLQ6IQ16 392 aa1.43□□□□□ -2.18
VCL-203ENST00000461383 OR51T1Q8NGJ9 327 aa1.43□□□□□ -2.18
VCL-203ENST00000461383 ZCCHC13Q8WW36 166 aaKnown RBP1.43□□□□□ -2.18
VCL-203ENST00000461383 ANKRD7Q92527 254 aa1.43□□□□□ -2.18
VCL-203ENST00000461383 DCUN1D1Q96GG9 259 aa1.43□□□□□ -2.18
VCL-203ENST00000461383 ERMAPQ96PL5 475 aaPredicted RBP1.43□□□□□ -2.18
VCL-203ENST00000461383 OR52E6Q96RD3 313 aa1.43□□□□□ -2.18
VCL-203ENST00000461383 IMMP2LQ96T52 175 aa1.43□□□□□ -2.18
VCL-203ENST00000461383 ULBP3Q9BZM4 244 aa1.43□□□□□ -2.18
VCL-203ENST00000461383 UCK1Q9HA47 277 aa1.43□□□□□ -2.18
VCL-203ENST00000461383 XAGE1AQ9HD64 81 aa1.43□□□□□ -2.18
VCL-203ENST00000461383 TMEM106BQ9NUM4 274 aa1.43□□□□□ -2.18
VCL-203ENST00000461383 PAQR5Q9NXK6 330 aaPredicted RBP1.43□□□□□ -2.18
VCL-203ENST00000461383 NAT8Q9UHE5 227 aa1.43□□□□□ -2.18
VCL-203ENST00000461383 GBF1Q92538 1859 aa1.43□□□□□ -2.18
VCL-203ENST00000461383 DOCK10Q96BY6 2186 aa1.42□□□□□ -2.18
VCL-203ENST00000461383 MUC19Q7Z5P9 8384 aa1.42□□□□□ -2.18
VCL-203ENST00000461383 ADAMTS7Q9UKP4 1686 aa1.42□□□□□ -2.18
VCL-203ENST00000461383 CACNA1GO43497 2377 aa1.42□□□□□ -2.18
VCL-203ENST00000461383 DCCP43146 1447 aa1.42□□□□□ -2.18
VCL-203ENST00000461383 KDM5BQ9UGL1 1544 aa1.42□□□□□ -2.18
VCL-203ENST00000461383 PCDH15Q96QU1 1955 aa1.42□□□□□ -2.18
VCL-203ENST00000461383 TRBV20OR9-2A0A075B6H5 130 aa1.42□□□□□ -2.18
VCL-203ENST00000461383 CLDN24A6NM45 220 aa1.42□□□□□ -2.18
VCL-203ENST00000461383 INMT-MINDY4F8WBC2 141 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms