RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 NGFP01138 241 aa12.93□□□□□ -0.34
SSR4-206ENST00000460616 CEACAM8P31997 349 aaPredicted RBP12.93□□□□□ -0.34
SSR4-206ENST00000460616 PRRX1P54821 245 aa12.93□□□□□ -0.34
SSR4-206ENST00000460616 B3GALT5-AS1P59052 145 aa12.93□□□□□ -0.34
SSR4-206ENST00000460616 RPL31P62899 125 aaKnown RBP12.93□□□□□ -0.34
SSR4-206ENST00000460616 PCOLCEQ15113 449 aa12.93□□□□□ -0.34
SSR4-206ENST00000460616 OR10J3Q5JRS4 329 aa12.93□□□□□ -0.34
SSR4-206ENST00000460616 DCAF12Q5T6F0 453 aa12.93□□□□□ -0.34
SSR4-206ENST00000460616 UNQ5815/PRO19632Q6UWF5 114 aa12.93□□□□□ -0.34
SSR4-206ENST00000460616 GGNQ86UU5 652 aa12.93□□□□□ -0.34
SSR4-206ENST00000460616 OR8I2Q8N0Y5 310 aa12.93□□□□□ -0.34
SSR4-206ENST00000460616 KCNS1Q96KK3 526 aa12.93□□□□□ -0.34
SSR4-206ENST00000460616 BET1LQ9NYM9 111 aa12.93□□□□□ -0.34
SSR4-206ENST00000460616 FREM2Q5SZK8 3169 aa12.93□□□□□ -0.34
SSR4-206ENST00000460616 SAA2-SAA4A0A096LPE2 208 aa12.93□□□□□ -0.34
SSR4-206ENST00000460616 FAM166BA8MTA8 275 aa12.93□□□□□ -0.34
SSR4-206ENST00000460616 STAG3L2P0CL84 134 aa12.93□□□□□ -0.34
SSR4-206ENST00000460616 STAG3L3P0CL85 134 aa12.93□□□□□ -0.34
SSR4-206ENST00000460616 ZNF83P51522 516 aa12.93□□□□□ -0.34
SSR4-206ENST00000460616 SSR4P51571 173 aa12.93□□□□□ -0.34
SSR4-206ENST00000460616 C9orf135Q5VTT2 229 aa12.93□□□□□ -0.34
SSR4-206ENST00000460616 H2BFWTQ7Z2G1 175 aa12.93□□□□□ -0.34
SSR4-206ENST00000460616 ZNF808Q8N4W9 903 aaPredicted RBP12.93□□□□□ -0.34
SSR4-206ENST00000460616 ZNF645Q8N7E2 425 aa12.93□□□□□ -0.34
SSR4-206ENST00000460616 OR2M7Q8NG81 312 aa12.93□□□□□ -0.34
SSR4-206ENST00000460616 PRRG4Q9BZD6 226 aa12.93□□□□□ -0.34
SSR4-206ENST00000460616 C3orf79P0CE67 100 aa12.92□□□□□ -0.34
SSR4-206ENST00000460616 TSPOP30536 169 aa12.92□□□□□ -0.34
SSR4-206ENST00000460616 GNG3P63215 75 aa12.92□□□□□ -0.34
SSR4-206ENST00000460616 TGFBR3Q03167 851 aa12.92□□□□□ -0.34
SSR4-206ENST00000460616 KIAA1644Q3SXP7 199 aa12.92□□□□□ -0.34
SSR4-206ENST00000460616 OR10D3Q8NH80 312 aa12.92□□□□□ -0.34
SSR4-206ENST00000460616 RCHY1Q96PM5 261 aa12.92□□□□□ -0.34
SSR4-206ENST00000460616 YTHDF2Q9Y5A9 579 aaKnown RBP12.92□□□□□ -0.34
SSR4-206ENST00000460616 ANKRD30BLA7E2S9 258 aa12.91□□□□□ -0.34
SSR4-206ENST00000460616 SPINK4O60575 86 aa12.91□□□□□ -0.34
SSR4-206ENST00000460616 ARF1P84077 181 aaKnown RBP12.91□□□□□ -0.34
SSR4-206ENST00000460616 RPL19P84098 196 aaKnown RBP12.91□□□□□ -0.34
SSR4-206ENST00000460616 ZBTB34Q8NCN2 500 aa12.91□□□□□ -0.34
SSR4-206ENST00000460616 OR2D3Q8NGH3 330 aa12.91□□□□□ -0.34
SSR4-206ENST00000460616 ABHD3Q8WU67 409 aa12.91□□□□□ -0.34
SSR4-206ENST00000460616 KCNE4Q8WWG9 221 aa12.91□□□□□ -0.34
SSR4-206ENST00000460616 OR2D2Q9H210 308 aa12.91□□□□□ -0.34
SSR4-206ENST00000460616 SLC35D1Q9NTN3 355 aa12.91□□□□□ -0.34
SSR4-206ENST00000460616 MRPS16Q9Y3D3 137 aaKnown RBP12.91□□□□□ -0.34
SSR4-206ENST00000460616 LOC105371242A0A075B767 164 aa12.91□□□□□ -0.34
SSR4-206ENST00000460616 C15orf62A8K5M9 175 aa12.91□□□□□ -0.34
SSR4-206ENST00000460616 C17orf98A8MV24 154 aa12.91□□□□□ -0.34
SSR4-206ENST00000460616 RRHO14718 337 aa12.91□□□□□ -0.34
SSR4-206ENST00000460616 RAB29O14966 203 aa12.91□□□□□ -0.34
SSR4-206ENST00000460616 CLDN14O95500 239 aa12.91□□□□□ -0.34
SSR4-206ENST00000460616 PDLIM3Q53GG5 364 aaPredicted RBP12.91□□□□□ -0.34
SSR4-206ENST00000460616 WDR73Q6P4I2 378 aa12.91□□□□□ -0.34
SSR4-206ENST00000460616 DEPPQ9NTK1 212 aa12.91□□□□□ -0.34
SSR4-206ENST00000460616 ZNF324O75467 553 aaPredicted RBP12.9□□□□□ -0.34
SSR4-206ENST00000460616 OR2H2O95918 312 aa12.9□□□□□ -0.34
SSR4-206ENST00000460616 MT-ND6P03923 174 aa12.9□□□□□ -0.34
SSR4-206ENST00000460616 RAC2P15153 192 aa12.9□□□□□ -0.34
SSR4-206ENST00000460616 OPRK1P41145 380 aa12.9□□□□□ -0.34
SSR4-206ENST00000460616 BRWD1-AS2P59051 145 aa12.9□□□□□ -0.34
SSR4-206ENST00000460616 CATR1Q13166 79 aa12.9□□□□□ -0.34
SSR4-206ENST00000460616 IL11RAQ14626 422 aa12.9□□□□□ -0.34
SSR4-206ENST00000460616 ZNF718Q3SXZ3 478 aa12.9□□□□□ -0.34
SSR4-206ENST00000460616 NRN1LQ496H8 165 aa12.9□□□□□ -0.34
SSR4-206ENST00000460616 MORN2Q502X0 79 aa12.9□□□□□ -0.34
SSR4-206ENST00000460616 ETFRF1Q6IPR1 90 aa12.9□□□□□ -0.34
SSR4-206ENST00000460616 EAF1Q96JC9 268 aaPredicted RBP12.9□□□□□ -0.34
SSR4-206ENST00000460616 SH2D2AQ9NP31 389 aa12.9□□□□□ -0.34
SSR4-206ENST00000460616 V9GYV3 84 aa12.9□□□□□ -0.34
SSR4-206ENST00000460616 AHCTF1Q8WYP5 2266 aa12.9□□□□□ -0.34
SSR4-206ENST00000460616 IGHV2OR16-5A0A0B4J2B6 119 aa12.9□□□□□ -0.34
SSR4-206ENST00000460616 OR5B21A6NL26 309 aa12.9□□□□□ -0.34
SSR4-206ENST00000460616 MPDU1O75352 247 aa12.9□□□□□ -0.34
SSR4-206ENST00000460616 REG1AP05451 166 aa12.9□□□□□ -0.34
SSR4-206ENST00000460616 CA6P23280 308 aa12.9□□□□□ -0.34
SSR4-206ENST00000460616 SSPNQ14714 243 aa12.9□□□□□ -0.34
SSR4-206ENST00000460616 RNF151Q2KHN1 245 aa12.9□□□□□ -0.34
SSR4-206ENST00000460616 TIPARPQ7Z3E1 657 aaKnown RBP12.9□□□□□ -0.34
SSR4-206ENST00000460616 ATOH7Q8N100 152 aa12.9□□□□□ -0.34
SSR4-206ENST00000460616 BORCS7Q96B45 105 aa12.9□□□□□ -0.34
SSR4-206ENST00000460616 MBNL3Q9NUK0 354 aaKnown RBP12.9□□□□□ -0.34
SSR4-206ENST00000460616 C9orf172C9J069 976 aa12.89□□□□□ -0.35
SSR4-206ENST00000460616 C9JCJ5 164 aa12.89□□□□□ -0.35
SSR4-206ENST00000460616 NEURL1O76050 574 aa12.89□□□□□ -0.35
SSR4-206ENST00000460616 SRD5A2P31213 254 aa12.89□□□□□ -0.35
SSR4-206ENST00000460616 GFRA1P56159 465 aa12.89□□□□□ -0.35
SSR4-206ENST00000460616 MRPL14Q6P1L8 145 aaKnown RBP12.89□□□□□ -0.35
SSR4-206ENST00000460616 NIT1Q86X76 327 aa12.89□□□□□ -0.35
SSR4-206ENST00000460616 OR4C5Q8NGB2 326 aa12.89□□□□□ -0.35
SSR4-206ENST00000460616 UHRF2Q96PU4 802 aa12.89□□□□□ -0.35
SSR4-206ENST00000460616 PKIBQ9C010 78 aa12.89□□□□□ -0.35
SSR4-206ENST00000460616 MPC1Q9Y5U8 109 aa12.89□□□□□ -0.35
SSR4-206ENST00000460616 LY96Q9Y6Y9 160 aa12.89□□□□□ -0.35
SSR4-206ENST00000460616 SPTBN4Q9H254 2564 aa12.89□□□□□ -0.35
SSR4-206ENST00000460616 AKAP13Q12802 2813 aa12.89□□□□□ -0.35
SSR4-206ENST00000460616 MRPL33O75394 65 aaKnown RBP12.89□□□□□ -0.35
SSR4-206ENST00000460616 CX3CL1P78423 397 aa12.89□□□□□ -0.35
SSR4-206ENST00000460616 IGFBP7Q16270 282 aa12.89□□□□□ -0.35
SSR4-206ENST00000460616 FBLN7Q53RD9 439 aa12.89□□□□□ -0.35
SSR4-206ENST00000460616 SPATA46Q5T0L3 261 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms