RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 COMMD4Q9H0A8 199 aa2.78□□□□□ -1.96
ECHDC1-211ENST00000460558 ROPN1Q9HAT0 212 aaPredicted RBP2.78□□□□□ -1.96
ECHDC1-211ENST00000460558 S100A14Q9HCY8 104 aa2.78□□□□□ -1.96
ECHDC1-211ENST00000460558 MRPL27Q9P0M9 148 aaKnown RBP2.78□□□□□ -1.96
ECHDC1-211ENST00000460558 METTL1Q9UBP6 276 aaKnown RBP2.78□□□□□ -1.96
ECHDC1-211ENST00000460558 ZNF230Q9UIE0 474 aaPredicted RBP2.78□□□□□ -1.96
ECHDC1-211ENST00000460558 ZNF221Q9UK13 617 aa2.78□□□□□ -1.96
ECHDC1-211ENST00000460558 DIMT1Q9UNQ2 313 aaKnown RBP2.78□□□□□ -1.96
ECHDC1-211ENST00000460558 FSIP2Q5CZC0 6907 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 IGHV3-43A0A0B4J1X8 118 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 TMEM269A0A1B0GVZ9 245 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 A6NIN4 97 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 DHRS7CA6NNS2 312 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 FFAR1O14842 300 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 ANGPT2O15123 496 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 SLC31A2O15432 143 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 GATBO75879 557 aaKnown RBP2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 RBBP9O75884 186 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 IGLV3-1P01715 115 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 SEMG1P04279 462 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 KRT8P05787 483 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 SPART-AS1P0CW21 52 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 C8orf88P0DMB2 117 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 IGHV3-43DP0DP04 118 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 HTN3P15516 51 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 SPI1P17947 270 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 PRDX6P30041 224 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 PAX5Q02548 391 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 LRRC23Q53EV4 343 aaPredicted RBP2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 CYBRD1Q53TN4 286 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 PAN3Q58A45 887 aaKnown RBP2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 CT45A1Q5HYN5 189 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 RSBN1Q5VWQ0 802 aaPredicted RBP2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 TMEM179BQ7Z7N9 219 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 NECAP1Q8NC96 275 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 OR10A6Q8NH74 314 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 CT45A3Q8NHU0 189 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 GPR148Q8TDV2 347 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 THEM6Q8WUY1 208 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 ARL11Q969Q4 196 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 C11orf52Q96A22 123 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 KRTAP1-5Q9BYS1 174 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 C20orf27Q9GZN8 174 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 Q9H3A6 140 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 KAT8Q9H7Z6 458 aaKnown RBP2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 SLC35D1Q9NTN3 355 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 FAM206AQ9NX38 181 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 NDUFA13Q9P0J0 144 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 GNG12Q9UBI6 72 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 TBC1D24Q9ULP9 559 aa2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 EXOSC1Q9Y3B2 195 aaKnown RBP2.77□□□□□ -1.97
ECHDC1-211ENST00000460558 A0A087X002 238 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 TRAV39A0A0B4J263 110 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 TEX48A0A1B0GUV7 120 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 H0YJX3 145 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 C15orf65H3BRN8 121 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 H7C2Y5 167 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 SULT1B1O43704 296 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 NOL3O60936 208 aaKnown RBP2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 GMNNO75496 209 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 GSTT2P0CG29 244 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 GSTT2BP0CG30 244 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 GALP22466 123 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 GPR183P32249 361 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 KCNJ3P48549 501 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 RBP2P50120 134 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 PAX9P55771 341 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 SELENOWP63302 87 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 DGCR6Q14129 220 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 PTGES3Q15185 160 aaKnown RBP2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 USF2Q15853 346 aaPredicted RBP2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 ZNF829Q3KNS6 432 aaPredicted RBP2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 SLC25A30Q5SVS4 291 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 LCE1AQ5T7P2 110 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 GLT8D1Q68CQ7 371 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 Q6P435 159 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 Q6ZRP5 223 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 NOTCH2NLQ7Z3S9 236 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 CCDC197Q8NCU1 140 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 ZNF439Q8NDP4 499 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 OTOSQ8NHW6 89 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 PHB2Q99623 299 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 CGREF1Q99674 301 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 RNF5Q99942 180 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 SULT4A1Q9BR01 284 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 FUNDC2Q9BWH2 189 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 MAGT1Q9H0U3 335 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 TMEM231Q9H6L2 316 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 RHOFQ9HBH0 211 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 SDF2L1Q9HCN8 221 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 TMEM14BQ9NUH8 114 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 CCDC167Q9P0B6 97 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 NUFIP1Q9UHK0 495 aaKnown RBP2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 ENOPH1Q9UHY7 261 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 ING4Q9UNL4 249 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 UFC1Q9Y3C8 167 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 PYGO1Q9Y3Y4 419 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 V9GYQ6 96 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 V9GYS6 101 aa2.76□□□□□ -1.97
ECHDC1-211ENST00000460558 TMEM189A5PLL7 270 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms