RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 CD300LFQ8TDQ1 290 aa17.73■□□□□ 0.43
PTPN4-208ENST00000460289 MOB3AQ96BX8 217 aa17.73■□□□□ 0.43
PTPN4-208ENST00000460289 TNCP24821 2201 aa17.72■□□□□ 0.43
PTPN4-208ENST00000460289 FAM25AB3EWG3 89 aa17.72■□□□□ 0.43
PTPN4-208ENST00000460289 FAM25CB3EWG5 89 aa17.72■□□□□ 0.43
PTPN4-208ENST00000460289 FAM25GB3EWG6 89 aa17.72■□□□□ 0.43
PTPN4-208ENST00000460289 HPRT1P00492 218 aa17.72■□□□□ 0.43
PTPN4-208ENST00000460289 GNRHRP30968 328 aa17.72■□□□□ 0.43
PTPN4-208ENST00000460289 ALDH3B2P48448 385 aa17.72■□□□□ 0.43
PTPN4-208ENST00000460289 SLC25A42Q86VD7 318 aa17.72■□□□□ 0.43
PTPN4-208ENST00000460289 SNX29P2Q8IUI4 249 aa17.72■□□□□ 0.43
PTPN4-208ENST00000460289 TTC9CQ8N5M4 171 aa17.72■□□□□ 0.43
PTPN4-208ENST00000460289 OR4A5Q8NH83 315 aa17.72■□□□□ 0.43
PTPN4-208ENST00000460289 ADAM30Q9UKF2 790 aa17.72■□□□□ 0.43
PTPN4-208ENST00000460289 ZP3P21754 424 aa17.71■□□□□ 0.43
PTPN4-208ENST00000460289 HLA-DMAP28067 261 aa17.71■□□□□ 0.43
PTPN4-208ENST00000460289 HRH1P35367 487 aa17.71■□□□□ 0.43
PTPN4-208ENST00000460289 TAS2R31P59538 309 aa17.71■□□□□ 0.43
PTPN4-208ENST00000460289 AADACL3Q5VUY0 350 aa17.71■□□□□ 0.43
PTPN4-208ENST00000460289 SAP30O75446 220 aa17.7■□□□□ 0.42
PTPN4-208ENST00000460289 NQO2P16083 231 aa17.7■□□□□ 0.42
PTPN4-208ENST00000460289 RPL27AP46776 148 aaKnown RBP17.7■□□□□ 0.42
PTPN4-208ENST00000460289 TSPAN5P62079 268 aa17.7■□□□□ 0.42
PTPN4-208ENST00000460289 C10orf55Q5SWW7 151 aa17.7■□□□□ 0.42
PTPN4-208ENST00000460289 SSX9Q7RTT3 188 aa17.7■□□□□ 0.42
PTPN4-208ENST00000460289 CMTM1Q8IZ96 169 aa17.7■□□□□ 0.42
PTPN4-208ENST00000460289 OR51H1Q8NH63 302 aa17.7■□□□□ 0.42
PTPN4-208ENST00000460289 BET1LQ9NYM9 111 aa17.7■□□□□ 0.42
PTPN4-208ENST00000460289 ANKRD34BA5PLL1 514 aa17.69■□□□□ 0.42
PTPN4-208ENST00000460289 FAM223BA6NKX1 122 aa17.69■□□□□ 0.42
PTPN4-208ENST00000460289 RCVRNP35243 200 aa17.69■□□□□ 0.42
PTPN4-208ENST00000460289 RPL8P62917 257 aaKnown RBP17.69■□□□□ 0.42
PTPN4-208ENST00000460289 OR4A47Q6IF82 309 aa17.69■□□□□ 0.42
PTPN4-208ENST00000460289 ZNF343Q6P1L6 599 aa17.69■□□□□ 0.42
PTPN4-208ENST00000460289 ACSM6Q6P461 480 aa17.69■□□□□ 0.42
PTPN4-208ENST00000460289 FAM223AQ8IWN6 122 aa17.69■□□□□ 0.42
PTPN4-208ENST00000460289 PLEKHA2Q9HB19 425 aa17.69■□□□□ 0.42
PTPN4-208ENST00000460289 HRASLSQ9HDD0 168 aa17.69■□□□□ 0.42
PTPN4-208ENST00000460289 PEF1Q9UBV8 284 aaKnown RBP17.69■□□□□ 0.42
PTPN4-208ENST00000460289 ZNF256Q9Y2P7 627 aaPredicted RBP17.69■□□□□ 0.42
PTPN4-208ENST00000460289 DPPA5A6NC42 116 aa17.68■□□□□ 0.42
PTPN4-208ENST00000460289 PGLYRP1O75594 196 aaPredicted RBP17.68■□□□□ 0.42
PTPN4-208ENST00000460289 TPPPO94811 219 aa17.68■□□□□ 0.42
PTPN4-208ENST00000460289 POU2AF1Q16633 256 aa17.68■□□□□ 0.42
PTPN4-208ENST00000460289 LPCAT3Q6P1A2 487 aa17.68■□□□□ 0.42
PTPN4-208ENST00000460289 C15orf40Q8WUR7 153 aa17.68■□□□□ 0.42
PTPN4-208ENST00000460289 FYTTD1Q96QD9 318 aaKnown RBP17.68■□□□□ 0.42
PTPN4-208ENST00000460289 OR4C12Q96R67 309 aa17.68■□□□□ 0.42
PTPN4-208ENST00000460289 ELOVL1Q9BW60 279 aa17.68■□□□□ 0.42
PTPN4-208ENST00000460289 SLC2A9Q9NRM0 540 aa17.68■□□□□ 0.42
PTPN4-208ENST00000460289 ZNF257Q9Y2Q1 563 aa17.68■□□□□ 0.42
PTPN4-208ENST00000460289 TRBV9A0A0B4J1U6 114 aa17.67■□□□□ 0.42
PTPN4-208ENST00000460289 TEX22C9J3V5 150 aa17.67■□□□□ 0.42
PTPN4-208ENST00000460289 GPR31O00270 319 aa17.67■□□□□ 0.42
PTPN4-208ENST00000460289 IL6RP08887 468 aaPredicted RBP17.67■□□□□ 0.42
PTPN4-208ENST00000460289 ZNF735P0CB33 412 aa17.67■□□□□ 0.42
PTPN4-208ENST00000460289 HLA-GP17693 338 aa17.67■□□□□ 0.42
PTPN4-208ENST00000460289 RHOGP84095 191 aa17.67■□□□□ 0.42
PTPN4-208ENST00000460289 ATP5G2Q06055 141 aa17.67■□□□□ 0.42
PTPN4-208ENST00000460289 PRR25Q96S07 402 aa17.67■□□□□ 0.42
PTPN4-208ENST00000460289 HMX3A6NHT5 357 aa17.66■□□□□ 0.42
PTPN4-208ENST00000460289 NPIPB5A8MRT5 1133 aa17.66■□□□□ 0.42
PTPN4-208ENST00000460289 F2RP25116 425 aa17.66■□□□□ 0.42
PTPN4-208ENST00000460289 S100GP29377 79 aa17.66■□□□□ 0.42
PTPN4-208ENST00000460289 NECAP1Q8NC96 275 aa17.66■□□□□ 0.42
PTPN4-208ENST00000460289 DMBX1Q8NFW5 382 aa17.66■□□□□ 0.42
PTPN4-208ENST00000460289 AKIP1Q9NQ31 210 aa17.66■□□□□ 0.42
PTPN4-208ENST00000460289 COMMD9Q9P000 198 aa17.66■□□□□ 0.42
PTPN4-208ENST00000460289 EXTL2Q9UBQ6 330 aa17.66■□□□□ 0.42
PTPN4-208ENST00000460289 DHFRP00374 187 aa17.65■□□□□ 0.42
PTPN4-208ENST00000460289 PRH1P02810 166 aa17.65■□□□□ 0.42
PTPN4-208ENST00000460289 RLN1P04808 185 aa17.65■□□□□ 0.42
PTPN4-208ENST00000460289 DEFA5Q01523 94 aa17.65■□□□□ 0.42
PTPN4-208ENST00000460289 ZNF45Q02386 682 aa17.65■□□□□ 0.42
PTPN4-208ENST00000460289 KLF5Q13887 457 aaPredicted RBP17.65■□□□□ 0.42
PTPN4-208ENST00000460289 TATDN3Q17R31 274 aa17.65■□□□□ 0.42
PTPN4-208ENST00000460289 CLVS1Q8IUQ0 354 aaPredicted RBP17.65■□□□□ 0.42
PTPN4-208ENST00000460289 OR6Q1Q8NGQ2 317 aa17.65■□□□□ 0.42
PTPN4-208ENST00000460289 RAB2BQ8WUD1 216 aa17.65■□□□□ 0.42
PTPN4-208ENST00000460289 DGCR14Q96DF8 476 aaKnown RBP17.65■□□□□ 0.42
PTPN4-208ENST00000460289 FXYD6Q9H0Q3 95 aa17.65■□□□□ 0.42
PTPN4-208ENST00000460289 E7EUB6 86 aa17.64■□□□□ 0.41
PTPN4-208ENST00000460289 UPK2O00526 184 aa17.64■□□□□ 0.41
PTPN4-208ENST00000460289 RBMXL2O75526 392 aaKnown RBP17.64■□□□□ 0.41
PTPN4-208ENST00000460289 S1PR2O95136 353 aa17.64■□□□□ 0.41
PTPN4-208ENST00000460289 LY86O95711 162 aa17.64■□□□□ 0.41
PTPN4-208ENST00000460289 FGF2P09038 288 aa17.64■□□□□ 0.41
PTPN4-208ENST00000460289 ERVK-16P61578 105 aa17.64■□□□□ 0.41
PTPN4-208ENST00000460289 CD69Q07108 199 aa17.64■□□□□ 0.41
PTPN4-208ENST00000460289 FAM209BQ5JX69 171 aa17.64■□□□□ 0.41
PTPN4-208ENST00000460289 VAX1Q5SQQ9 334 aa17.64■□□□□ 0.41
PTPN4-208ENST00000460289 B9D2Q9BPU9 175 aa17.64■□□□□ 0.41
PTPN4-208ENST00000460289 BCL7BQ9BQE9 202 aa17.64■□□□□ 0.41
PTPN4-208ENST00000460289 COMMD5Q9GZQ3 224 aa17.64■□□□□ 0.41
PTPN4-208ENST00000460289 TMEM140Q9NV12 185 aa17.64■□□□□ 0.41
PTPN4-208ENST00000460289 LSM4Q9Y4Z0 139 aaKnown RBP17.64■□□□□ 0.41
PTPN4-208ENST00000460289 RGS5O15539 181 aa17.63■□□□□ 0.41
PTPN4-208ENST00000460289 CRYGCP07315 174 aa17.63■□□□□ 0.41
PTPN4-208ENST00000460289 TMBIM6P55061 237 aa17.63■□□□□ 0.41
PTPN4-208ENST00000460289 SPCS2Q15005 226 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms