RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 ANXA10Q9UJ72 324 aa8.68□□□□□ -1.02
HERC4-207ENST00000460168 TSSC4Q9Y5U2 329 aaPredicted RBP8.68□□□□□ -1.02
HERC4-207ENST00000460168 HIVEP3Q5T1R4 2406 aa8.67□□□□□ -1.02
HERC4-207ENST00000460168 IGKV1D-8A0A087WSZ0 117 aa8.67□□□□□ -1.02
HERC4-207ENST00000460168 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.67□□□□□ -1.02
HERC4-207ENST00000460168 SIRPB1O00241 398 aa8.67□□□□□ -1.02
HERC4-207ENST00000460168 SH2D1BO14796 132 aa8.67□□□□□ -1.02
HERC4-207ENST00000460168 WNT9BO14905 357 aa8.67□□□□□ -1.02
HERC4-207ENST00000460168 OR2H2O95918 312 aa8.67□□□□□ -1.02
HERC4-207ENST00000460168 CD3EP07766 207 aa8.67□□□□□ -1.02
HERC4-207ENST00000460168 ROS1P08922 2347 aa8.67□□□□□ -1.02
HERC4-207ENST00000460168 PSG1P11464 419 aa8.67□□□□□ -1.02
HERC4-207ENST00000460168 GNLYP22749 145 aa8.67□□□□□ -1.02
HERC4-207ENST00000460168 TLE1Q04724 770 aa8.67□□□□□ -1.02
HERC4-207ENST00000460168 CHD3Q12873 2000 aaKnown RBP8.67□□□□□ -1.02
HERC4-207ENST00000460168 ZNF146Q15072 292 aa8.67□□□□□ -1.02
HERC4-207ENST00000460168 LRRC29Q8WV35 223 aa8.67□□□□□ -1.02
HERC4-207ENST00000460168 ZNF286AQ9HBT8 521 aa8.67□□□□□ -1.02
HERC4-207ENST00000460168 ANKHD1Q8IWZ3 2542 aaKnown RBP8.67□□□□□ -1.02
HERC4-207ENST00000460168 LOC102724200A0A096LPH7 203 aaPredicted RBP8.66□□□□□ -1.02
HERC4-207ENST00000460168 TRAV24A0A0B4J272 114 aa8.66□□□□□ -1.02
HERC4-207ENST00000460168 ESDP10768 282 aa8.66□□□□□ -1.02
HERC4-207ENST00000460168 TNFAIP6P98066 277 aaPredicted RBP8.66□□□□□ -1.02
HERC4-207ENST00000460168 HOXA4Q00056 320 aaPredicted RBP8.66□□□□□ -1.02
HERC4-207ENST00000460168 C4orf17Q53FE4 359 aa8.66□□□□□ -1.02
HERC4-207ENST00000460168 FAM71F2Q6NXP2 309 aa8.66□□□□□ -1.02
HERC4-207ENST00000460168 ITLN1Q8WWA0 313 aa8.66□□□□□ -1.02
HERC4-207ENST00000460168 WDR89Q96FK6 387 aaPredicted RBP8.66□□□□□ -1.02
HERC4-207ENST00000460168 ZNF471Q9BX82 626 aaPredicted RBP8.66□□□□□ -1.02
HERC4-207ENST00000460168 HES4Q9HCC6 221 aa8.66□□□□□ -1.02
HERC4-207ENST00000460168 RNF115Q9Y4L5 304 aa8.66□□□□□ -1.02
HERC4-207ENST00000460168 SHISA9B4DS77 424 aa8.66□□□□□ -1.02
HERC4-207ENST00000460168 TOX4O94842 621 aa8.66□□□□□ -1.02
HERC4-207ENST00000460168 HAND1O96004 215 aa8.66□□□□□ -1.02
HERC4-207ENST00000460168 TRGC2P03986 189 aa8.66□□□□□ -1.02
HERC4-207ENST00000460168 Q6P435 159 aa8.66□□□□□ -1.02
HERC4-207ENST00000460168 ACP7Q6ZNF0 438 aa8.66□□□□□ -1.02
HERC4-207ENST00000460168 NECAP1Q8NC96 275 aa8.66□□□□□ -1.02
HERC4-207ENST00000460168 OR1P1Q8NH06 330 aa8.66□□□□□ -1.02
HERC4-207ENST00000460168 FRZBQ92765 325 aa8.66□□□□□ -1.02
HERC4-207ENST00000460168 NECAP2Q9NVZ3 263 aa8.66□□□□□ -1.02
HERC4-207ENST00000460168 IGSF23A1L1A6 192 aa8.65□□□□□ -1.02
HERC4-207ENST00000460168 TNFRSF13BO14836 293 aaPredicted RBP8.65□□□□□ -1.02
HERC4-207ENST00000460168 ZG16O60844 167 aa8.65□□□□□ -1.02
HERC4-207ENST00000460168 ZNF205O95201 554 aa8.65□□□□□ -1.02
HERC4-207ENST00000460168 IGHV1-46P01743 117 aa8.65□□□□□ -1.02
HERC4-207ENST00000460168 SPRNQ5BIV9 151 aa8.65□□□□□ -1.02
HERC4-207ENST00000460168 MARCH1Q8TCQ1 289 aa8.65□□□□□ -1.02
HERC4-207ENST00000460168 TMEM18Q96B42 140 aa8.65□□□□□ -1.02
HERC4-207ENST00000460168 ABHD14AQ9BUJ0 271 aa8.65□□□□□ -1.02
HERC4-207ENST00000460168 FKBP11Q9NYL4 201 aa8.65□□□□□ -1.02
HERC4-207ENST00000460168 VSIG4Q9Y279 399 aa8.65□□□□□ -1.02
HERC4-207ENST00000460168 CFAP46Q8IYW2 2715 aa8.65□□□□□ -1.02
HERC4-207ENST00000460168 A0A087WWC5 75 aa8.65□□□□□ -1.03
HERC4-207ENST00000460168 A0A1B0GU03 582 aa8.65□□□□□ -1.03
HERC4-207ENST00000460168 NAPSAO96009 420 aa8.65□□□□□ -1.03
HERC4-207ENST00000460168 CTSDP07339 412 aaPredicted RBP8.65□□□□□ -1.03
HERC4-207ENST00000460168 OR5H8P0DN80 308 aa8.65□□□□□ -1.03
HERC4-207ENST00000460168 RBMXP38159 391 aaKnown RBP8.65□□□□□ -1.03
HERC4-207ENST00000460168 TFF3Q07654 80 aa8.65□□□□□ -1.03
HERC4-207ENST00000460168 GNMTQ14749 295 aa8.65□□□□□ -1.03
HERC4-207ENST00000460168 GCSAMLQ5JQS6 135 aa8.65□□□□□ -1.03
HERC4-207ENST00000460168 ZDHHC22Q8N966 263 aa8.65□□□□□ -1.03
HERC4-207ENST00000460168 OR52B4Q8NGK2 314 aa8.65□□□□□ -1.03
HERC4-207ENST00000460168 CACNA1DQ01668 2161 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 SRRM5B3KS81 715 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 C9JQL5 133 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 E7EQL1 145 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 FAM157CP0CG43 387 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 VSIG10L2P0DP72 767 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 SLC25A4P12235 298 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 MDH2P40926 338 aaKnown RBP8.64□□□□□ -1.03
HERC4-207ENST00000460168 H2BFSP57053 126 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 CCL8P80075 99 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 ATXN7L3Q14CW9 347 aaPredicted RBP8.64□□□□□ -1.03
HERC4-207ENST00000460168 ELOBQ15370 118 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 VAMP3Q15836 100 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 TDRG1Q3Y452 100 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 WDR25Q64LD2 544 aaPredicted RBP8.64□□□□□ -1.03
HERC4-207ENST00000460168 Q6ZPA2 131 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 SLC36A1Q7Z2H8 476 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 SMIM20Q8N5G0 67 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 NEUROG1Q92886 237 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 PTH2Q96A98 100 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 RAB39BQ96DA2 213 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 RSG1Q9BU20 258 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 LPAR3Q9UBY5 353 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 NAT8Q9UHE5 227 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 SPTBN1Q01082 2364 aaKnown RBP8.64□□□□□ -1.03
HERC4-207ENST00000460168 PKDREJQ9NTG1 2253 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 KIR2DS1A0A191URI9 304 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 GAGE12BA1L429 117 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 C17orf100A8MU93 164 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 CLDN14O95500 239 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 TNFRSF1AP19438 455 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 CFHR2P36980 270 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 KIR2DS4P43632 304 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 KIR2DS1Q14954 304 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 MMDQ15546 238 aa8.64□□□□□ -1.03
HERC4-207ENST00000460168 TEX43Q6ZNM6 134 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms