RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 CITED2Q99967 270 aaPredicted RBP12.35□□□□□ -0.43
SDF4-204ENST00000459994 AIFM2Q9BRQ8 373 aa12.35□□□□□ -0.43
SDF4-204ENST00000459994 GPN1Q9HCN4 374 aaPredicted RBP12.35□□□□□ -0.43
SDF4-204ENST00000459994 COMMD9Q9P000 198 aa12.35□□□□□ -0.43
SDF4-204ENST00000459994 TMEM56-RWDD3S4R434 201 aa12.35□□□□□ -0.43
SDF4-204ENST00000459994 A0A0B4J2A0 478 aa12.34□□□□□ -0.43
SDF4-204ENST00000459994 SNRPGP15A8MWD9 76 aa12.34□□□□□ -0.43
SDF4-204ENST00000459994 FBXO24O75426 580 aa12.34□□□□□ -0.43
SDF4-204ENST00000459994 AMY1AP04745 511 aa12.34□□□□□ -0.43
SDF4-204ENST00000459994 POU2AF1Q16633 256 aa12.34□□□□□ -0.43
SDF4-204ENST00000459994 C10orf99Q6UWK7 81 aa12.34□□□□□ -0.43
SDF4-204ENST00000459994 CADM3Q8N126 398 aa12.34□□□□□ -0.43
SDF4-204ENST00000459994 LRTM2Q8N967 370 aa12.34□□□□□ -0.43
SDF4-204ENST00000459994 OR8H1Q8NGG4 311 aa12.34□□□□□ -0.43
SDF4-204ENST00000459994 MITD1Q8WV92 249 aa12.34□□□□□ -0.43
SDF4-204ENST00000459994 TSNAXQ99598 290 aaKnown RBP12.34□□□□□ -0.43
SDF4-204ENST00000459994 PRSS22Q9GZN4 317 aa12.34□□□□□ -0.43
SDF4-204ENST00000459994 SHPKQ9UHJ6 478 aa12.34□□□□□ -0.43
SDF4-204ENST00000459994 PITPNC1Q9UKF7 332 aa12.34□□□□□ -0.43
SDF4-204ENST00000459994 C7orf66A4D0T2 115 aa12.33□□□□□ -0.44
SDF4-204ENST00000459994 ATG12O94817 140 aa12.33□□□□□ -0.44
SDF4-204ENST00000459994 S1PR2O95136 353 aa12.33□□□□□ -0.44
SDF4-204ENST00000459994 HRASP01112 189 aa12.33□□□□□ -0.44
SDF4-204ENST00000459994 PRB2P02812 416 aaPredicted RBP12.33□□□□□ -0.44
SDF4-204ENST00000459994 NQO2P16083 231 aa12.33□□□□□ -0.44
SDF4-204ENST00000459994 TMEM11P17152 192 aa12.33□□□□□ -0.44
SDF4-204ENST00000459994 RPS16P62249 146 aaKnown RBP12.33□□□□□ -0.44
SDF4-204ENST00000459994 HES1Q14469 280 aa12.33□□□□□ -0.44
SDF4-204ENST00000459994 ANKRD55Q3KP44 614 aa12.33□□□□□ -0.44
SDF4-204ENST00000459994 SELENOHQ8IZQ5 122 aaKnown RBP12.33□□□□□ -0.44
SDF4-204ENST00000459994 LGI3Q8N145 548 aa12.33□□□□□ -0.44
SDF4-204ENST00000459994 CASTOR1Q8WTX7 329 aa12.33□□□□□ -0.44
SDF4-204ENST00000459994 RBMXL1Q96E39 390 aaKnown RBP12.33□□□□□ -0.44
SDF4-204ENST00000459994 SEC22CQ9BRL7 303 aa12.33□□□□□ -0.44
SDF4-204ENST00000459994 DNAH3Q8TD57 4116 aa12.33□□□□□ -0.44
SDF4-204ENST00000459994 SHOXO15266 292 aa12.32□□□□□ -0.44
SDF4-204ENST00000459994 SPDEFO95238 335 aa12.32□□□□□ -0.44
SDF4-204ENST00000459994 IGKV1-39P01597 117 aa12.32□□□□□ -0.44
SDF4-204ENST00000459994 OPN1MWP04001 364 aa12.32□□□□□ -0.44
SDF4-204ENST00000459994 IGKV1D-39P04432 117 aa12.32□□□□□ -0.44
SDF4-204ENST00000459994 OPN1MW2P0DN77 364 aa12.32□□□□□ -0.44
SDF4-204ENST00000459994 OPN1MW3P0DN78 364 aa12.32□□□□□ -0.44
SDF4-204ENST00000459994 VDAC2P45880 294 aaPredicted RBP12.32□□□□□ -0.44
SDF4-204ENST00000459994 HNF4GQ14541 408 aa12.32□□□□□ -0.44
SDF4-204ENST00000459994 TATDN3Q17R31 274 aa12.32□□□□□ -0.44
SDF4-204ENST00000459994 BEAN1Q3B7T3 259 aa12.32□□□□□ -0.44
SDF4-204ENST00000459994 TCTEX1D4Q5JR98 221 aa12.32□□□□□ -0.44
SDF4-204ENST00000459994 C16orf82Q7Z2V1 217 aa12.32□□□□□ -0.44
SDF4-204ENST00000459994 ZNF695Q8IW36 515 aa12.32□□□□□ -0.44
SDF4-204ENST00000459994 NPBQ8NG41 125 aa12.32□□□□□ -0.44
SDF4-204ENST00000459994 OR52B4Q8NGK2 314 aa12.32□□□□□ -0.44
SDF4-204ENST00000459994 COQ8AQ8NI60 647 aa12.32□□□□□ -0.44
SDF4-204ENST00000459994 LHFPL5Q8TAF8 219 aa12.32□□□□□ -0.44
SDF4-204ENST00000459994 RBPMSQ93062 196 aaKnown RBP12.32□□□□□ -0.44
SDF4-204ENST00000459994 R3HDM4Q96D70 268 aa12.32□□□□□ -0.44
SDF4-204ENST00000459994 RITA1Q96K30 269 aa12.32□□□□□ -0.44
SDF4-204ENST00000459994 HARBI1Q96MB7 349 aa12.32□□□□□ -0.44
SDF4-204ENST00000459994 SLC25A33Q9BSK2 321 aa12.32□□□□□ -0.44
SDF4-204ENST00000459994 PLSCR3Q9NRY6 295 aa12.32□□□□□ -0.44
SDF4-204ENST00000459994 TNCP24821 2201 aa12.31□□□□□ -0.44
SDF4-204ENST00000459994 A0A0B4J293 547 aa12.31□□□□□ -0.44
SDF4-204ENST00000459994 DUXBA0A1W2PPF3 345 aa12.31□□□□□ -0.44
SDF4-204ENST00000459994 SRRM4A7MD48 611 aaKnown RBP12.31□□□□□ -0.44
SDF4-204ENST00000459994 CREBL2O60519 120 aaPredicted RBP12.31□□□□□ -0.44
SDF4-204ENST00000459994 OR2F2O95006 317 aa12.31□□□□□ -0.44
SDF4-204ENST00000459994 NDUFA3O95167 84 aa12.31□□□□□ -0.44
SDF4-204ENST00000459994 IGLV2-23P01705 113 aa12.31□□□□□ -0.44
SDF4-204ENST00000459994 PSG5Q15238 335 aa12.31□□□□□ -0.44
SDF4-204ENST00000459994 ARSJQ5FYB0 599 aaPredicted RBP12.31□□□□□ -0.44
SDF4-204ENST00000459994 SAMD5Q5TGI4 173 aa12.31□□□□□ -0.44
SDF4-204ENST00000459994 TMEM268Q5VZI3 342 aa12.31□□□□□ -0.44
SDF4-204ENST00000459994 C12orf45Q8N5I9 185 aaPredicted RBP12.31□□□□□ -0.44
SDF4-204ENST00000459994 SEC22AQ96IW7 307 aa12.31□□□□□ -0.44
SDF4-204ENST00000459994 RHOVQ96L33 236 aa12.31□□□□□ -0.44
SDF4-204ENST00000459994 RBM14Q96PK6 669 aaKnown RBP12.31□□□□□ -0.44
SDF4-204ENST00000459994 PHB2Q99623 299 aa12.31□□□□□ -0.44
SDF4-204ENST00000459994 A0A1W2PRX2 142 aa12.3□□□□□ -0.44
SDF4-204ENST00000459994 NBR2O15453 112 aa12.3□□□□□ -0.44
SDF4-204ENST00000459994 UBE2KP61086 200 aa12.3□□□□□ -0.44
SDF4-204ENST00000459994 ERVK-16P61578 105 aa12.3□□□□□ -0.44
SDF4-204ENST00000459994 MMDQ15546 238 aa12.3□□□□□ -0.44
SDF4-204ENST00000459994 VMA21Q3ZAQ7 101 aa12.3□□□□□ -0.44
SDF4-204ENST00000459994 Q6ZNX1 250 aa12.3□□□□□ -0.44
SDF4-204ENST00000459994 PUSL1Q8N0Z8 303 aaKnown RBP12.3□□□□□ -0.44
SDF4-204ENST00000459994 TEX45Q8NA69 505 aa12.3□□□□□ -0.44
SDF4-204ENST00000459994 VSTM2AQ8TAG5 236 aa12.3□□□□□ -0.44
SDF4-204ENST00000459994 PRR13Q9NZ81 148 aa12.3□□□□□ -0.44
SDF4-204ENST00000459994 ALG5Q9Y673 324 aa12.3□□□□□ -0.44
SDF4-204ENST00000459994 DBX1A6NMT0 343 aa12.29□□□□□ -0.44
SDF4-204ENST00000459994 MARCH11A6NNE9 402 aa12.29□□□□□ -0.44
SDF4-204ENST00000459994 M0QZK8 103 aa12.29□□□□□ -0.44
SDF4-204ENST00000459994 RRHO14718 337 aa12.29□□□□□ -0.44
SDF4-204ENST00000459994 FGF16O43320 207 aa12.29□□□□□ -0.44
SDF4-204ENST00000459994 KRASP01116 189 aa12.29□□□□□ -0.44
SDF4-204ENST00000459994 IGKV1-5P01602 117 aa12.29□□□□□ -0.44
SDF4-204ENST00000459994 CRYGBP07316 175 aa12.29□□□□□ -0.44
SDF4-204ENST00000459994 IL6RP08887 468 aaPredicted RBP12.29□□□□□ -0.44
SDF4-204ENST00000459994 P0C879 139 aa12.29□□□□□ -0.44
SDF4-204ENST00000459994 VDAC1P21796 283 aa12.29□□□□□ -0.44
SDF4-204ENST00000459994 CNTFRP26992 372 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms