RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 GZMKP49863 264 aa8.46□□□□□ -1.06
USP39-210ENST00000459775 RANP62826 216 aaKnown RBP8.46□□□□□ -1.06
USP39-210ENST00000459775 GNB2P62879 340 aa8.46□□□□□ -1.06
USP39-210ENST00000459775 SSBP1Q04837 148 aaKnown RBP8.46□□□□□ -1.06
USP39-210ENST00000459775 HMGN3Q15651 99 aa8.46□□□□□ -1.06
USP39-210ENST00000459775 SSX7Q7RTT5 188 aa8.46□□□□□ -1.06
USP39-210ENST00000459775 SPICQ8N5J4 248 aa8.46□□□□□ -1.06
USP39-210ENST00000459775 OR8U1Q8NH10 309 aa8.46□□□□□ -1.06
USP39-210ENST00000459775 ST6GALNAC6Q969X2 333 aa8.46□□□□□ -1.06
USP39-210ENST00000459775 PTH2Q96A98 100 aa8.46□□□□□ -1.06
USP39-210ENST00000459775 UPRTQ96BW1 309 aa8.46□□□□□ -1.06
USP39-210ENST00000459775 LINC00052Q96N35 136 aa8.46□□□□□ -1.06
USP39-210ENST00000459775 MMP26Q9NRE1 261 aa8.46□□□□□ -1.06
USP39-210ENST00000459775 IGKV1D-13A0A0B4J2D9 117 aa8.45□□□□□ -1.06
USP39-210ENST00000459775 VWC2LB2RUY7 222 aa8.45□□□□□ -1.06
USP39-210ENST00000459775 RAB29O14966 203 aa8.45□□□□□ -1.06
USP39-210ENST00000459775 SERPINE2P07093 398 aa8.45□□□□□ -1.06
USP39-210ENST00000459775 IGKV1-13P0DP09 117 aa8.45□□□□□ -1.06
USP39-210ENST00000459775 AADACP22760 399 aa8.45□□□□□ -1.06
USP39-210ENST00000459775 NFYBP25208 207 aa8.45□□□□□ -1.06
USP39-210ENST00000459775 AADACL3Q5VUY0 350 aa8.45□□□□□ -1.06
USP39-210ENST00000459775 ZNF660Q6AZW8 331 aaPredicted RBP8.45□□□□□ -1.06
USP39-210ENST00000459775 ACOT7LQ6ZUV0 252 aa8.45□□□□□ -1.06
USP39-210ENST00000459775 KRTAP1-3Q8IUG1 177 aa8.45□□□□□ -1.06
USP39-210ENST00000459775 ATG101Q9BSB4 218 aa8.45□□□□□ -1.06
USP39-210ENST00000459775 SSBP3Q9BWW4 388 aaPredicted RBP8.45□□□□□ -1.06
USP39-210ENST00000459775 NECAP2Q9NVZ3 263 aa8.45□□□□□ -1.06
USP39-210ENST00000459775 CALYQ9NYX4 217 aa8.45□□□□□ -1.06
USP39-210ENST00000459775 KCNIP1Q9NZI2 227 aa8.45□□□□□ -1.06
USP39-210ENST00000459775 PRRC2AP48634 2157 aaKnown RBP8.45□□□□□ -1.06
USP39-210ENST00000459775 TRGV10A0A0A0MS01 117 aa8.45□□□□□ -1.06
USP39-210ENST00000459775 RPS10-NUDT3A0A1W2PQS6 291 aa8.45□□□□□ -1.06
USP39-210ENST00000459775 OR2F2O95006 317 aa8.45□□□□□ -1.06
USP39-210ENST00000459775 PET100P0DJ07 73 aa8.45□□□□□ -1.06
USP39-210ENST00000459775 TAS2R46P59540 309 aa8.45□□□□□ -1.06
USP39-210ENST00000459775 SNRPEP62304 92 aaKnown RBP8.45□□□□□ -1.06
USP39-210ENST00000459775 VAX1Q5SQQ9 334 aa8.45□□□□□ -1.06
USP39-210ENST00000459775 C11orf42Q8N5U0 333 aa8.45□□□□□ -1.06
USP39-210ENST00000459775 TOMM40LQ969M1 308 aa8.45□□□□□ -1.06
USP39-210ENST00000459775 C18orf12Q96KH6 178 aa8.45□□□□□ -1.06
USP39-210ENST00000459775 GINS4Q9BRT9 223 aa8.45□□□□□ -1.06
USP39-210ENST00000459775 BARX1Q9HBU1 254 aaPredicted RBP8.45□□□□□ -1.06
USP39-210ENST00000459775 RPUSD1Q9UJJ7 312 aaKnown RBP8.45□□□□□ -1.06
USP39-210ENST00000459775 VSIG4Q9Y279 399 aa8.45□□□□□ -1.06
USP39-210ENST00000459775 YLPM1P49750 1951 aaKnown RBP8.44□□□□□ -1.06
USP39-210ENST00000459775 TRBV6-7A0A0A0MS04 114 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 KIR2DS1A0A191URI9 304 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 KBTBD11-OT1A0A1B0GTJ5 212 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 CXorf65A6NEN9 183 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 RNF223E7ERA6 249 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 ARPC1BO15143 372 aaKnown RBP8.44□□□□□ -1.06
USP39-210ENST00000459775 ATG12O94817 140 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 FSTL3O95633 263 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 OR10J4P0C629 311 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 OR8U9P0C7N5 309 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 SPP1P10451 314 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 KIR2DS4P43632 304 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 LOXL3P58215 753 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 LINC00205P59089 165 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 KIR2DS1Q14954 304 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 Q6ZS49 121 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 OR4A4PQ8NGN8 299 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 GALMQ96C23 342 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 TMEM231Q9H6L2 316 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 PPIAL4CA0A0B4J2A2 164 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 C13orf42A0A1B0GVH6 325 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 hADV38S2A0JD32 116 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 A8MWP6 167 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 PPIAL4GP0DN37 164 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 FAUP35544 74 aaKnown RBP8.44□□□□□ -1.06
USP39-210ENST00000459775 ZNF134P52741 427 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 DLX6P56179 175 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 MEF2DQ14814 521 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 TEX261Q6UWH6 196 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 TMEM182Q6ZP80 229 aaPredicted RBP8.44□□□□□ -1.06
USP39-210ENST00000459775 PDZD9Q8IXQ8 264 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 ADAD2Q8NCV1 583 aaKnown RBP8.44□□□□□ -1.06
USP39-210ENST00000459775 WFDC11Q8NEX6 87 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 OR10X1Q8NGY0 326 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 TERB2Q8NHR7 220 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 Q96MF0 132 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 ZNF714Q96N38 554 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 SIRPDQ9H106 197 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 DPAGT1Q9H3H5 408 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 SLC2A9Q9NRM0 540 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 ZNF107Q9UII5 783 aaPredicted RBP8.44□□□□□ -1.06
USP39-210ENST00000459775 U3KQ87 197 aa8.44□□□□□ -1.06
USP39-210ENST00000459775 ZNF469Q96JG9 3925 aaPredicted RBP8.44□□□□□ -1.06
USP39-210ENST00000459775 LOC105371242A0A075B767 164 aa8.43□□□□□ -1.06
USP39-210ENST00000459775 A0A1W2PRX2 142 aa8.43□□□□□ -1.06
USP39-210ENST00000459775 PPYP01298 95 aa8.43□□□□□ -1.06
USP39-210ENST00000459775 ZNF728P0DKX0 622 aa8.43□□□□□ -1.06
USP39-210ENST00000459775 CNN1P51911 297 aaKnown RBP8.43□□□□□ -1.06
USP39-210ENST00000459775 SRSF7Q16629 238 aaKnown RBP eCLIP8.43□□□□□ -1.06
USP39-210ENST00000459775 CR1LQ2VPA4 569 aa8.43□□□□□ -1.06
USP39-210ENST00000459775 DHRS11Q6UWP2 260 aa8.43□□□□□ -1.06
USP39-210ENST00000459775 MOB1BQ7L9L4 216 aa8.43□□□□□ -1.06
USP39-210ENST00000459775 LHFPL1Q86WI0 220 aa8.43□□□□□ -1.06
USP39-210ENST00000459775 DUSP18Q8NEJ0 188 aa8.43□□□□□ -1.06
USP39-210ENST00000459775 OR2AK2Q8NG84 335 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms