RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 CGB3P0DN86 165 aa7.33□□□□□ -1.24
HDAC3-202ENST00000459727 CGB7P0DN87 165 aa7.33□□□□□ -1.24
HDAC3-202ENST00000459727 TNFRSF1AP19438 455 aa7.33□□□□□ -1.24
HDAC3-202ENST00000459727 CCKARP32238 428 aa7.33□□□□□ -1.24
HDAC3-202ENST00000459727 RPL29P47914 159 aaKnown RBP7.33□□□□□ -1.24
HDAC3-202ENST00000459727 EDDM3BP56851 147 aa7.33□□□□□ -1.24
HDAC3-202ENST00000459727 LOXL3P58215 753 aa7.33□□□□□ -1.24
HDAC3-202ENST00000459727 HSPE1P61604 102 aaKnown RBP7.33□□□□□ -1.24
HDAC3-202ENST00000459727 RELBQ01201 579 aa7.33□□□□□ -1.24
HDAC3-202ENST00000459727 FAM71F2Q6NXP2 309 aa7.33□□□□□ -1.24
HDAC3-202ENST00000459727 TEPPQ6URK8 271 aa7.33□□□□□ -1.24
HDAC3-202ENST00000459727 SLC24A4Q8NFF2 622 aa7.33□□□□□ -1.24
HDAC3-202ENST00000459727 RNASEH2CQ8TDP1 164 aaKnown RBP7.33□□□□□ -1.24
HDAC3-202ENST00000459727 TMEM170AQ8WVE7 144 aa7.33□□□□□ -1.24
HDAC3-202ENST00000459727 DDB2Q92466 427 aa7.33□□□□□ -1.24
HDAC3-202ENST00000459727 RNF2Q99496 336 aa7.33□□□□□ -1.24
HDAC3-202ENST00000459727 OPN3Q9H1Y3 402 aaPredicted RBP7.33□□□□□ -1.24
HDAC3-202ENST00000459727 GAL3ST2Q9H3Q3 398 aa7.33□□□□□ -1.24
HDAC3-202ENST00000459727 TMEM14BQ9NUH8 114 aa7.33□□□□□ -1.24
HDAC3-202ENST00000459727 SLC25A10Q9UBX3 287 aaPredicted RBP7.33□□□□□ -1.24
HDAC3-202ENST00000459727 TCF19Q9Y242 345 aa7.33□□□□□ -1.24
HDAC3-202ENST00000459727 PXMP4Q9Y6I8 212 aa7.33□□□□□ -1.24
HDAC3-202ENST00000459727 SPEGQ15772 3267 aa7.33□□□□□ -1.24
HDAC3-202ENST00000459727 SPTBN2O15020 2390 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 IGHV3-43A0A0B4J1X8 118 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 MDFIC2A0A1B0GVS7 189 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 hADV38S2A0JD32 116 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 A8MXE2 369 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 TSTD3H0UI37 97 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 DVL1O14640 695 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 GFRA3O60609 400 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 YIF1AO95070 293 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 CD55P08174 381 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 OR9G9P0C7N8 305 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 STAG3L2P0CL84 134 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 STAG3L3P0CL85 134 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 IGHV3-43DP0DP04 118 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 HIST1H1BP16401 226 aaKnown RBP7.32□□□□□ -1.24
HDAC3-202ENST00000459727 EGR1P18146 543 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 SPINK2P20155 84 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 ZNF83P51522 516 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 TAS2R45P59539 299 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 TNFAIP6P98066 277 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-202ENST00000459727 MEF2CQ06413 473 aaPredicted RBP7.32□□□□□ -1.24
HDAC3-202ENST00000459727 FOXL1Q12952 345 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 DEFB109BQ30KR1 87 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 COX19Q49B96 90 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 STUMQ69YW2 141 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 TREML4Q6UXN2 200 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 Q6ZS92 163 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 MOGAT3Q86VF5 341 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 MRPL41Q8IXM3 137 aaKnown RBP7.32□□□□□ -1.24
HDAC3-202ENST00000459727 PNKDQ8N490 385 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 DEFB124Q8NES8 71 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 OR5B3Q8NH48 314 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 RFESDQ8TAC1 157 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 TMEM190Q8WZ59 177 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 FRZBQ92765 325 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 RHOVQ96L33 236 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 GGTLC1Q9BX51 225 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 PLEKHA3Q9HB20 300 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 TMEM167BQ9NRX6 74 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 ELOVL5Q9NYP7 299 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 IDI2-AS1Q9NZ38 188 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 METRNQ9UJH8 293 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 TP53TG5Q9Y2B4 290 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 LSM4Q9Y4Z0 139 aaKnown RBP7.32□□□□□ -1.24
HDAC3-202ENST00000459727 ZFYVE26Q68DK2 2539 aa7.32□□□□□ -1.24
HDAC3-202ENST00000459727 IGHV3-64DA0A0J9YX35 117 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 DEFB108AA8MXU0 73 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 C9JCJ5 164 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 PRSS46E5RG02 174 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 INS-IGF2F8WCM5 200 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 GCGP01275 180 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 APOA2P02652 100 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 AREGP15514 252 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 PDLIM4P50479 330 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 MRPS11P82912 194 aaKnown RBP7.31□□□□□ -1.24
HDAC3-202ENST00000459727 TLE1Q04724 770 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 RTP5Q14D33 572 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 ACTL10Q5JWF8 245 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 TEX36Q5VZQ5 186 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 CST9LP1Q5W188 147 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 TMEM108Q6UXF1 575 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 SPNS3Q6ZMD2 512 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 LINC01551Q86U37 167 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 C8orf31Q8N9H6 132 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 OR10D4PQ8NGN7 298 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 OR1P1Q8NH06 330 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 OR4X1Q8NH49 305 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 OR4A5Q8NH83 315 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 VSTM2AQ8TAG5 236 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 OSR1Q8TAX0 266 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-202ENST00000459727 ITLN1Q8WWA0 313 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 C11orf52Q96A22 123 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 TMEM18Q96B42 140 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 PACRGQ96M98 296 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-202ENST00000459727 FZR1Q9UM11 496 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 SLC45A2Q9UMX9 530 aa7.31□□□□□ -1.24
HDAC3-202ENST00000459727 LINC00312Q9Y6C7 94 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms