RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 GNRHRP30968 328 aa14.48□□□□□ -0.09
USP39-209ENST00000458268 MSMO1Q15800 293 aa14.48□□□□□ -0.09
USP39-209ENST00000458268 DMBX1Q8NFW5 382 aa14.48□□□□□ -0.09
USP39-209ENST00000458268 BORCS5Q969J3 196 aa14.48□□□□□ -0.09
USP39-209ENST00000458268 KLK11Q9UBX7 282 aa14.48□□□□□ -0.09
USP39-209ENST00000458268 DPPA5A6NC42 116 aa14.47□□□□□ -0.09
USP39-209ENST00000458268 LINC01619G3V211 115 aa14.47□□□□□ -0.09
USP39-209ENST00000458268 H3BMQ9 156 aa14.47□□□□□ -0.09
USP39-209ENST00000458268 S1PR2O95136 353 aa14.47□□□□□ -0.09
USP39-209ENST00000458268 IFNA6P05013 189 aa14.47□□□□□ -0.09
USP39-209ENST00000458268 MYOD1P15172 320 aa14.47□□□□□ -0.09
USP39-209ENST00000458268 RPL27AP46776 148 aaKnown RBP14.47□□□□□ -0.09
USP39-209ENST00000458268 KRTAP10-11P60412 298 aa14.47□□□□□ -0.09
USP39-209ENST00000458268 IL18Q14116 193 aa14.47□□□□□ -0.09
USP39-209ENST00000458268 OR4A47Q6IF82 309 aa14.47□□□□□ -0.09
USP39-209ENST00000458268 DHRS11Q6UWP2 260 aa14.47□□□□□ -0.09
USP39-209ENST00000458268 CMTM1Q8IZ96 169 aa14.47□□□□□ -0.09
USP39-209ENST00000458268 DCUN1D4Q92564 292 aa14.47□□□□□ -0.09
USP39-209ENST00000458268 ISOC1Q96CN7 298 aa14.47□□□□□ -0.09
USP39-209ENST00000458268 GPR31O00270 319 aa14.46□□□□□ -0.09
USP39-209ENST00000458268 OR9G9P0C7N8 305 aa14.46□□□□□ -0.09
USP39-209ENST00000458268 PGAM2P15259 253 aa14.46□□□□□ -0.09
USP39-209ENST00000458268 DGCR2P98153 550 aa14.46□□□□□ -0.09
USP39-209ENST00000458268 FHL3Q13643 280 aa14.46□□□□□ -0.09
USP39-209ENST00000458268 RNASE10Q5GAN6 216 aaKnown RBP14.46□□□□□ -0.09
USP39-209ENST00000458268 REC114Q7Z4M0 266 aa14.46□□□□□ -0.09
USP39-209ENST00000458268 DYNC2LI1Q8TCX1 351 aa14.46□□□□□ -0.09
USP39-209ENST00000458268 FCAMRQ8WWV6 532 aa14.46□□□□□ -0.09
USP39-209ENST00000458268 DIRAS2Q96HU8 199 aa14.46□□□□□ -0.09
USP39-209ENST00000458268 ABHD1Q96SE0 405 aa14.46□□□□□ -0.09
USP39-209ENST00000458268 SPIN2AQ99865 258 aa14.46□□□□□ -0.09
USP39-209ENST00000458268 SPIN2BQ9BPZ2 258 aa14.46□□□□□ -0.09
USP39-209ENST00000458268 TINAGL1Q9GZM7 467 aaPredicted RBP14.46□□□□□ -0.09
USP39-209ENST00000458268 CCDC59Q9P031 241 aaKnown RBP14.46□□□□□ -0.09
USP39-209ENST00000458268 PGLYRP1O75594 196 aaPredicted RBP14.45□□□□□ -0.1
USP39-209ENST00000458268 HPRT1P00492 218 aa14.45□□□□□ -0.1
USP39-209ENST00000458268 CD3DP04234 171 aa14.45□□□□□ -0.1
USP39-209ENST00000458268 NQO2P16083 231 aa14.45□□□□□ -0.1
USP39-209ENST00000458268 S100GP29377 79 aa14.45□□□□□ -0.1
USP39-209ENST00000458268 LPAR6P43657 344 aa14.45□□□□□ -0.1
USP39-209ENST00000458268 ERVK-16P61578 105 aa14.45□□□□□ -0.1
USP39-209ENST00000458268 RUNX1Q01196 453 aa14.45□□□□□ -0.1
USP39-209ENST00000458268 DEFB121Q5J5C9 76 aa14.45□□□□□ -0.1
USP39-209ENST00000458268 C9orf66Q5T8R8 295 aa14.45□□□□□ -0.1
USP39-209ENST00000458268 C19orf35Q6ZS72 473 aa14.45□□□□□ -0.1
USP39-209ENST00000458268 PUSL1Q8N0Z8 303 aaKnown RBP14.45□□□□□ -0.1
USP39-209ENST00000458268 TMEM167AQ8TBQ9 72 aa14.45□□□□□ -0.1
USP39-209ENST00000458268 TMEM68Q96MH6 324 aa14.45□□□□□ -0.1
USP39-209ENST00000458268 BCL7BQ9BQE9 202 aa14.45□□□□□ -0.1
USP39-209ENST00000458268 TRAV3A0A0B4J244 114 aa14.44□□□□□ -0.1
USP39-209ENST00000458268 A0A0G2JLM5 398 aa14.44□□□□□ -0.1
USP39-209ENST00000458268 H3BUA1 57 aa14.44□□□□□ -0.1
USP39-209ENST00000458268 OVOL1O14753 267 aa14.44□□□□□ -0.1
USP39-209ENST00000458268 REG1AP05451 166 aa14.44□□□□□ -0.1
USP39-209ENST00000458268 PPP5CP53041 499 aa14.44□□□□□ -0.1
USP39-209ENST00000458268 RPL8P62917 257 aaKnown RBP14.44□□□□□ -0.1
USP39-209ENST00000458268 SCGB2B2Q4G0G5 96 aa14.44□□□□□ -0.1
USP39-209ENST00000458268 C15orf40Q8WUR7 153 aa14.44□□□□□ -0.1
USP39-209ENST00000458268 DLX4Q92988 240 aaPredicted RBP14.44□□□□□ -0.1
USP39-209ENST00000458268 TMEM140Q9NV12 185 aa14.44□□□□□ -0.1
USP39-209ENST00000458268 WI2-2373I1.2A0A1W2PRP0 233 aa14.43□□□□□ -0.1
USP39-209ENST00000458268 RBFOX2O43251 390 aaKnown RBP eCLIP14.43□□□□□ -0.1
USP39-209ENST00000458268 SAP30O75446 220 aa14.43□□□□□ -0.1
USP39-209ENST00000458268 LY86O95711 162 aa14.43□□□□□ -0.1
USP39-209ENST00000458268 HSPB1P04792 205 aaKnown RBP14.43□□□□□ -0.1
USP39-209ENST00000458268 HLA-GP17693 338 aa14.43□□□□□ -0.1
USP39-209ENST00000458268 ECI1P42126 302 aa14.43□□□□□ -0.1
USP39-209ENST00000458268 TAS2R31P59538 309 aa14.43□□□□□ -0.1
USP39-209ENST00000458268 RHOGP84095 191 aa14.43□□□□□ -0.1
USP39-209ENST00000458268 ADAD2Q8NCV1 583 aaKnown RBP14.43□□□□□ -0.1
USP39-209ENST00000458268 MCFD2Q8NI22 146 aa14.43□□□□□ -0.1
USP39-209ENST00000458268 CD300LFQ8TDQ1 290 aa14.43□□□□□ -0.1
USP39-209ENST00000458268 AIFM2Q9BRQ8 373 aa14.43□□□□□ -0.1
USP39-209ENST00000458268 MTFP1Q9UDX5 166 aa14.43□□□□□ -0.1
USP39-209ENST00000458268 OR2J3O76001 311 aa14.42□□□□□ -0.1
USP39-209ENST00000458268 KRASP01116 189 aa14.42□□□□□ -0.1
USP39-209ENST00000458268 IL6RP08887 468 aaPredicted RBP14.42□□□□□ -0.1
USP39-209ENST00000458268 PI3P19957 117 aa14.42□□□□□ -0.1
USP39-209ENST00000458268 F2RP25116 425 aa14.42□□□□□ -0.1
USP39-209ENST00000458268 VAX1Q5SQQ9 334 aa14.42□□□□□ -0.1
USP39-209ENST00000458268 FAAP20Q6NZ36 180 aa14.42□□□□□ -0.1
USP39-209ENST00000458268 LPCAT3Q6P1A2 487 aa14.42□□□□□ -0.1
USP39-209ENST00000458268 TBC1D26Q86UD7 250 aa14.42□□□□□ -0.1
USP39-209ENST00000458268 DGCR14Q96DF8 476 aaKnown RBP14.42□□□□□ -0.1
USP39-209ENST00000458268 HINT2Q9BX68 163 aa14.42□□□□□ -0.1
USP39-209ENST00000458268 BET1LQ9NYM9 111 aa14.42□□□□□ -0.1
USP39-209ENST00000458268 CEPT1Q9Y6K0 416 aa14.42□□□□□ -0.1
USP39-209ENST00000458268 TEX22C9J3V5 150 aa14.41□□□□□ -0.1
USP39-209ENST00000458268 E7EUB6 86 aa14.41□□□□□ -0.1
USP39-209ENST00000458268 K7EIL1 84 aa14.41□□□□□ -0.1
USP39-209ENST00000458268 RAB3DO95716 219 aa14.41□□□□□ -0.1
USP39-209ENST00000458268 AREGP15514 252 aa14.41□□□□□ -0.1
USP39-209ENST00000458268 MAS1LP35410 378 aa14.41□□□□□ -0.1
USP39-209ENST00000458268 G6PCP35575 357 aa14.41□□□□□ -0.1
USP39-209ENST00000458268 TAS2R19P59542 299 aa14.41□□□□□ -0.1
USP39-209ENST00000458268 EXOSC2Q13868 293 aaKnown RBP14.41□□□□□ -0.1
USP39-209ENST00000458268 SLC38A6Q8IZM9 456 aa14.41□□□□□ -0.1
USP39-209ENST00000458268 OR4D10Q8NGI6 311 aa14.41□□□□□ -0.1
USP39-209ENST00000458268 PRR25Q96S07 402 aa14.41□□□□□ -0.1
USP39-209ENST00000458268 RSRP1Q9BUV0 290 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms