RNA–Protein interactions for RNA: ENST00000458264.1

LINC01248-201, Transcript of long intergenic non-protein coding RNA 1248, humanhuman

TSL 3 BASIC

Gene LINC01248, Length 468 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01248-201ENST00000458264 DHFRP00374 187 aa11.15□□□□□ -0.62
LINC01248-201ENST00000458264 HLA-AP01891 365 aaKnown RBP11.15□□□□□ -0.62
LINC01248-201ENST00000458264 IL6RP08887 468 aaPredicted RBP11.15□□□□□ -0.62
LINC01248-201ENST00000458264 EDN2P20800 178 aa11.15□□□□□ -0.62
LINC01248-201ENST00000458264 CBLN1P23435 193 aa11.15□□□□□ -0.62
LINC01248-201ENST00000458264 NFYAP23511 347 aaPredicted RBP11.15□□□□□ -0.62
LINC01248-201ENST00000458264 TBCEQ15813 527 aaPredicted RBP11.15□□□□□ -0.62
LINC01248-201ENST00000458264 FAM106AQ4KMX7 169 aa11.15□□□□□ -0.62
LINC01248-201ENST00000458264 HACD4Q5VWC8 232 aa11.15□□□□□ -0.62
LINC01248-201ENST00000458264 VKORC1L1Q8N0U8 176 aa11.15□□□□□ -0.62
LINC01248-201ENST00000458264 PUSL1Q8N0Z8 303 aaKnown RBP11.15□□□□□ -0.62
LINC01248-201ENST00000458264 FYTTD1Q96QD9 318 aaKnown RBP11.15□□□□□ -0.62
LINC01248-201ENST00000458264 SLC2A9Q9NRM0 540 aa11.15□□□□□ -0.62
LINC01248-201ENST00000458264 NDUFB11Q9NX14 153 aa11.15□□□□□ -0.62
LINC01248-201ENST00000458264 NDUFB8O95169 186 aa11.14□□□□□ -0.63
LINC01248-201ENST00000458264 IGLV2-14P01704 120 aa11.14□□□□□ -0.63
LINC01248-201ENST00000458264 CRYGCP07315 174 aa11.14□□□□□ -0.63
LINC01248-201ENST00000458264 ZNF735P0CB33 412 aa11.14□□□□□ -0.63
LINC01248-201ENST00000458264 HIST1H1BP16401 226 aaKnown RBP11.14□□□□□ -0.63
LINC01248-201ENST00000458264 GALP22466 123 aa11.14□□□□□ -0.63
LINC01248-201ENST00000458264 ARL3P36405 182 aa11.14□□□□□ -0.63
LINC01248-201ENST00000458264 KLK9Q2XQG4 91 aa11.14□□□□□ -0.63
LINC01248-201ENST00000458264 ZNF57Q68EA5 555 aaPredicted RBP11.14□□□□□ -0.63
LINC01248-201ENST00000458264 CNIH2Q6PI25 160 aa11.14□□□□□ -0.63
LINC01248-201ENST00000458264 CLEC19AQ6UXS0 136 aa11.14□□□□□ -0.63
LINC01248-201ENST00000458264 TCTEX1D2Q8WW35 142 aa11.14□□□□□ -0.63
LINC01248-201ENST00000458264 NRG4Q8WWG1 115 aa11.14□□□□□ -0.63
LINC01248-201ENST00000458264 EEF1AKMT3Q96AZ1 226 aa11.14□□□□□ -0.63
LINC01248-201ENST00000458264 FANCD2OSQ96PS1 177 aa11.14□□□□□ -0.63
LINC01248-201ENST00000458264 KLK9Q9UKQ9 250 aa11.14□□□□□ -0.63
LINC01248-201ENST00000458264 IGKV1D-13A0A0B4J2D9 117 aa11.13□□□□□ -0.63
LINC01248-201ENST00000458264 ZNF320A2RRD8 509 aa11.13□□□□□ -0.63
LINC01248-201ENST00000458264 E7EUB6 86 aa11.13□□□□□ -0.63
LINC01248-201ENST00000458264 HRASP01112 189 aa11.13□□□□□ -0.63
LINC01248-201ENST00000458264 IGHV3-23P01764 117 aa11.13□□□□□ -0.63
LINC01248-201ENST00000458264 IGKV1-13P0DP09 117 aa11.13□□□□□ -0.63
LINC01248-201ENST00000458264 PSMB6P28072 239 aa11.13□□□□□ -0.63
LINC01248-201ENST00000458264 EIF4EBP1Q13541 118 aaPredicted RBP11.13□□□□□ -0.63
LINC01248-201ENST00000458264 ANKRD55Q3KP44 614 aa11.13□□□□□ -0.63
LINC01248-201ENST00000458264 OR4A47Q6IF82 309 aa11.13□□□□□ -0.63
LINC01248-201ENST00000458264 C19orf35Q6ZS72 473 aa11.13□□□□□ -0.63
LINC01248-201ENST00000458264 TMEM61Q8N0U2 210 aa11.13□□□□□ -0.63
LINC01248-201ENST00000458264 MFSD4AQ8N468 514 aa11.13□□□□□ -0.63
LINC01248-201ENST00000458264 CCDC140Q96MF4 163 aa11.13□□□□□ -0.63
LINC01248-201ENST00000458264 A0A1B0GW64 132 aa11.12□□□□□ -0.63
LINC01248-201ENST00000458264 TMEM213A2RRL7 107 aa11.12□□□□□ -0.63
LINC01248-201ENST00000458264 A8MWP6 167 aa11.12□□□□□ -0.63
LINC01248-201ENST00000458264 SCGNO76038 276 aa11.12□□□□□ -0.63
LINC01248-201ENST00000458264 AREGP15514 252 aa11.12□□□□□ -0.63
LINC01248-201ENST00000458264 CTRB1P17538 263 aa11.12□□□□□ -0.63
LINC01248-201ENST00000458264 CTRB2Q6GPI1 263 aa11.12□□□□□ -0.63
LINC01248-201ENST00000458264 C22orf42Q6IC83 251 aa11.12□□□□□ -0.63
LINC01248-201ENST00000458264 ZNF66Q6ZN08 573 aa11.12□□□□□ -0.63
LINC01248-201ENST00000458264 NR2C2APQ86WQ0 139 aa11.12□□□□□ -0.63
LINC01248-201ENST00000458264 UXS1Q8NBZ7 420 aa11.12□□□□□ -0.63
LINC01248-201ENST00000458264 OR52B4Q8NGK2 314 aa11.12□□□□□ -0.63
LINC01248-201ENST00000458264 CACNG8Q8WXS5 425 aa11.12□□□□□ -0.63
LINC01248-201ENST00000458264 AIFM2Q9BRQ8 373 aa11.12□□□□□ -0.63
LINC01248-201ENST00000458264 GGTLC1Q9BX51 225 aa11.12□□□□□ -0.63
LINC01248-201ENST00000458264 ANXA10Q9UJ72 324 aa11.12□□□□□ -0.63
LINC01248-201ENST00000458264 BLOC1S6Q9UL45 172 aa11.12□□□□□ -0.63
LINC01248-201ENST00000458264 SPATA2Q9UM82 520 aa11.12□□□□□ -0.63
LINC01248-201ENST00000458264 HYDINQ4G0P3 5121 aa11.11□□□□□ -0.63
LINC01248-201ENST00000458264 LOC102724200A0A096LPH7 203 aaPredicted RBP11.11□□□□□ -0.63
LINC01248-201ENST00000458264 TRBV7-1A0A0A6YYK4 115 aa11.11□□□□□ -0.63
LINC01248-201ENST00000458264 NOTOA8MTQ0 251 aa11.11□□□□□ -0.63
LINC01248-201ENST00000458264 ANKRD65E5RJM6 399 aa11.11□□□□□ -0.63
LINC01248-201ENST00000458264 DEFA4P12838 97 aa11.11□□□□□ -0.63
LINC01248-201ENST00000458264 BRWD1-AS2P59051 145 aa11.11□□□□□ -0.63
LINC01248-201ENST00000458264 GNG2P59768 71 aa11.11□□□□□ -0.63
LINC01248-201ENST00000458264 RPL8P62917 257 aaKnown RBP11.11□□□□□ -0.63
LINC01248-201ENST00000458264 OR4A5Q8NH83 315 aa11.11□□□□□ -0.63
LINC01248-201ENST00000458264 NUDCD2Q8WVJ2 157 aa11.11□□□□□ -0.63
LINC01248-201ENST00000458264 CXorf58Q96LI9 332 aa11.11□□□□□ -0.63
LINC01248-201ENST00000458264 TAS2R8Q9NYW2 309 aa11.11□□□□□ -0.63
LINC01248-201ENST00000458264 MLXQ9UH92 298 aa11.11□□□□□ -0.63
LINC01248-201ENST00000458264 S4R3C0 116 aa11.11□□□□□ -0.63
LINC01248-201ENST00000458264 TRAV25A0A0B4J276 109 aa11.1□□□□□ -0.63
LINC01248-201ENST00000458264 TMEM235A6NFC5 223 aa11.1□□□□□ -0.63
LINC01248-201ENST00000458264 CLEC3BP05452 202 aa11.1□□□□□ -0.63
LINC01248-201ENST00000458264 HLA-GP17693 338 aa11.1□□□□□ -0.63
LINC01248-201ENST00000458264 MSMO1Q15800 293 aa11.1□□□□□ -0.63
LINC01248-201ENST00000458264 SSX9Q7RTT3 188 aa11.1□□□□□ -0.63
LINC01248-201ENST00000458264 MARC2Q969Z3 335 aa11.1□□□□□ -0.63
LINC01248-201ENST00000458264 OVOL2Q9BRP0 275 aa11.1□□□□□ -0.63
LINC01248-201ENST00000458264 BET1LQ9NYM9 111 aa11.1□□□□□ -0.63
LINC01248-201ENST00000458264 SELENOKQ9Y6D0 94 aa11.1□□□□□ -0.63
LINC01248-201ENST00000458264 IGLV11-55A0A075B6I3 123 aa11.09□□□□□ -0.63
LINC01248-201ENST00000458264 SMIM30A4D0T7 59 aa11.09□□□□□ -0.63
LINC01248-201ENST00000458264 SSX5O60225 188 aa11.09□□□□□ -0.63
LINC01248-201ENST00000458264 SCAF4O95104 1147 aaKnown RBP11.09□□□□□ -0.63
LINC01248-201ENST00000458264 C8orf88P0DMB2 117 aa11.09□□□□□ -0.63
LINC01248-201ENST00000458264 HSPA13P48723 471 aa11.09□□□□□ -0.63
LINC01248-201ENST00000458264 BTNL8Q6UX41 500 aa11.09□□□□□ -0.63
LINC01248-201ENST00000458264 CNBD2Q96M20 576 aa11.09□□□□□ -0.63
LINC01248-201ENST00000458264 VCX3BQ9H321 246 aa11.09□□□□□ -0.63
LINC01248-201ENST00000458264 MRPL27Q9P0M9 148 aaKnown RBP11.09□□□□□ -0.63
LINC01248-201ENST00000458264 PLECQ15149 4684 aaKnown RBP11.08□□□□□ -0.64
LINC01248-201ENST00000458264 MFSD2BA6NFX1 497 aa11.08□□□□□ -0.64
LINC01248-201ENST00000458264 CGB1A6NKQ9 187 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms