RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 TSPO2Q5TGU0 170 aa4.38□□□□□ -1.71
VPS41-209ENST00000457055 LYRM7Q5U5X0 104 aa4.38□□□□□ -1.71
VPS41-209ENST00000457055 NXNL2Q5VZ03 156 aa4.38□□□□□ -1.71
VPS41-209ENST00000457055 HRCT1Q6UXD1 115 aa4.38□□□□□ -1.71
VPS41-209ENST00000457055 TEX29Q8N6K0 151 aa4.38□□□□□ -1.71
VPS41-209ENST00000457055 OLIG1Q8TAK6 271 aa4.38□□□□□ -1.71
VPS41-209ENST00000457055 OR51E1Q8TCB6 317 aa4.38□□□□□ -1.71
VPS41-209ENST00000457055 FMC1Q96HJ9 113 aa4.38□□□□□ -1.71
VPS41-209ENST00000457055 GGTLC1Q9BX51 225 aa4.38□□□□□ -1.71
VPS41-209ENST00000457055 DPY30Q9C005 99 aa4.38□□□□□ -1.71
VPS41-209ENST00000457055 SELENOIQ9C0D9 397 aa4.38□□□□□ -1.71
VPS41-209ENST00000457055 ARRDC1-AS1Q9H2J1 176 aa4.38□□□□□ -1.71
VPS41-209ENST00000457055 JPT2Q9H910 190 aa4.38□□□□□ -1.71
VPS41-209ENST00000457055 UBE2TQ9NPD8 197 aaPredicted RBP4.38□□□□□ -1.71
VPS41-209ENST00000457055 PARP11Q9NR21 331 aa4.38□□□□□ -1.71
VPS41-209ENST00000457055 TMEM45AQ9NWC5 275 aa4.38□□□□□ -1.71
VPS41-209ENST00000457055 SHPKQ9UHJ6 478 aa4.38□□□□□ -1.71
VPS41-209ENST00000457055 IER3IP1Q9Y5U9 82 aa4.38□□□□□ -1.71
VPS41-209ENST00000457055 COL11A1P12107 1806 aaPredicted RBP4.37□□□□□ -1.71
VPS41-209ENST00000457055 MYH6P13533 1939 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 FRYQ5TBA9 3013 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 TRAV26-2A0A0B4J265 109 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 A0A0D9SG52 128 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 DHRS12A0PJE2 317 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 MYBPHLA2RUH7 354 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 B4DEV8 164 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 TNFSF12O43508 249 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 SPRY3O43610 288 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 EDIL3O43854 480 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 FGF17O60258 216 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 ARL6IP5O75915 188 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 SLC2A10O95528 541 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 CXorf1O96002 111 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 IGKV5-2P06315 115 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 KIR2DS2P43631 304 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 THBS3P49746 956 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 NUDT2P50583 147 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 FABP5Q01469 135 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 POU3F1Q03052 451 aaPredicted RBP4.37□□□□□ -1.71
VPS41-209ENST00000457055 ZNF92Q03936 586 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 PRDX1Q06830 199 aaKnown RBP4.37□□□□□ -1.71
VPS41-209ENST00000457055 LAMTOR4Q0VGL1 99 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 DAZAP2Q15038 168 aaPredicted RBP4.37□□□□□ -1.71
VPS41-209ENST00000457055 MMDQ15546 238 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 MIDNQ504T8 468 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 ALG10Q5BKT4 473 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 FKBP1CQ5VVH2 108 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 OR4C11Q6IEV9 310 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 ZNF549Q6P9A3 640 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 ZNF730Q6ZMV8 503 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 C9orf139Q6ZV77 190 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 SUMF1Q8NBK3 374 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 LINC00301Q8NCQ3 95 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 OR8B12Q8NGG6 310 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 OR2T27Q8NH04 317 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 PRSS3P2Q8NHM4 247 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 C8orf46Q8TAG6 207 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 NEIL3Q8TAT5 605 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 SRSF12Q8WXF0 261 aaKnown RBP4.37□□□□□ -1.71
VPS41-209ENST00000457055 MAGOHBQ96A72 148 aaKnown RBP4.37□□□□□ -1.71
VPS41-209ENST00000457055 RITA1Q96K30 269 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 PLEKHF1Q96S99 279 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 PKMYT1Q99640 499 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 SFXN3Q9BWM7 321 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 TM2D1Q9BX74 207 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 WDR13Q9H1Z4 485 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 OR51E2Q9H255 320 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 TCEAL2Q9H3H9 227 aaPredicted RBP4.37□□□□□ -1.71
VPS41-209ENST00000457055 KLK11Q9UBX7 282 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 MRPS16Q9Y3D3 137 aaKnown RBP4.37□□□□□ -1.71
VPS41-209ENST00000457055 INSIG2Q9Y5U4 225 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 UBIAD1Q9Y5Z9 338 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 ASPMQ8IZT6 3477 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 ZNF236Q9UL36 1845 aa4.37□□□□□ -1.71
VPS41-209ENST00000457055 NBEAQ8NFP9 2946 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 CACNA1IQ9P0X4 2223 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 TRAV8-4A0A0B4J246 113 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 A0A1B0GWB2 263 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 A0A1W2PP11 408 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 OR4C45A6NMZ5 311 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 C15orf62A8K5M9 175 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 K7ENP7 123 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 OVOL1O14753 267 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 REM1O75628 298 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 OR2A4O95047 310 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 IGLC1P0CG04 106 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 ZNF728P0DKX0 622 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 FGF6P10767 208 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 CA6P23280 308 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 ZNF140P52738 457 aaPredicted RBP4.36□□□□□ -1.71
VPS41-209ENST00000457055 H2BFSP57053 126 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 TAS2R46P59540 309 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 AKR1C1Q04828 323 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 RAB6CQ53S08 254 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 TMEM255AQ5JRV8 349 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 FHL5Q5TD97 284 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 SLC35E4Q6ICL7 350 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 SBSNQ6UWP8 590 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 LRRTM1Q86UE6 522 aa4.36□□□□□ -1.71
VPS41-209ENST00000457055 SLC22A18ASQ8N1D0 253 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms