RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 TMEM136Q6ZRR5 245 aa8.58□□□□□ -1.04
CLIP4-208ENST00000456385 WDR86Q86TI4 376 aa8.58□□□□□ -1.04
CLIP4-208ENST00000456385 MS4A5Q9H3V2 200 aa8.58□□□□□ -1.04
CLIP4-208ENST00000456385 TP73-AS1Q9UF72 201 aa8.58□□□□□ -1.04
CLIP4-208ENST00000456385 FAM186AA6NE01 2351 aa8.58□□□□□ -1.04
CLIP4-208ENST00000456385 TNRC6AQ8NDV7 1962 aaKnown RBP8.58□□□□□ -1.04
CLIP4-208ENST00000456385 TRAV9-1A0A075B6T8 112 aa8.58□□□□□ -1.04
CLIP4-208ENST00000456385 A8MXE2 369 aa8.58□□□□□ -1.04
CLIP4-208ENST00000456385 K7EP13 123 aa8.58□□□□□ -1.04
CLIP4-208ENST00000456385 M0QZ24 198 aa8.58□□□□□ -1.04
CLIP4-208ENST00000456385 RAB29O14966 203 aa8.58□□□□□ -1.04
CLIP4-208ENST00000456385 PSPNO60542 156 aa8.58□□□□□ -1.04
CLIP4-208ENST00000456385 TOMM40O96008 361 aa8.58□□□□□ -1.04
CLIP4-208ENST00000456385 TFF1P04155 84 aa8.58□□□□□ -1.04
CLIP4-208ENST00000456385 OR9G9P0C7N8 305 aa8.58□□□□□ -1.04
CLIP4-208ENST00000456385 EN2P19622 333 aaPredicted RBP8.58□□□□□ -1.04
CLIP4-208ENST00000456385 LTBRP36941 435 aa8.58□□□□□ -1.04
CLIP4-208ENST00000456385 ZNF738Q8NE65 137 aa8.58□□□□□ -1.04
CLIP4-208ENST00000456385 IFI44Q8TCB0 444 aa8.58□□□□□ -1.04
CLIP4-208ENST00000456385 KCNE4Q8WWG9 221 aa8.58□□□□□ -1.04
CLIP4-208ENST00000456385 LOC102723996A0A087X1L8 192 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 OR5B21A6NL26 309 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 C12orf77C9JDV5 145 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 BMPR1BO00238 502 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 CA2P00918 260 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 RAC2P15153 192 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 GCHFRP30047 84 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 OPRK1P41145 380 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 MRPL54Q6P161 138 aaKnown RBP8.57□□□□□ -1.04
CLIP4-208ENST00000456385 FBXO46Q6PJ61 603 aaPredicted RBP8.57□□□□□ -1.04
CLIP4-208ENST00000456385 VASH2Q86V25 355 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 TUSC5Q8IXB3 177 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 TSKUQ8WUA8 353 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 GGTLC1Q9BX51 225 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 CLEC7AQ9BXN2 247 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 CHODLQ9H9P2 273 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 IGHV3-43A0A0B4J1X8 118 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 IGHV2OR16-5A0A0B4J2B6 119 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 DEFB108AA8MXU0 73 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 CDIPTO14735 213 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 KLF7O75840 302 aaPredicted RBP8.57□□□□□ -1.04
CLIP4-208ENST00000456385 MMP23AO75900 390 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 CGAP01215 116 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 IGHV3-43DP0DP04 118 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 CX3CL1P78423 397 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 CATR1Q13166 79 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 OR10J3Q5JRS4 329 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 ALKBH2Q6NS38 261 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 VKORC1L1Q8N0U8 176 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 ABHD12Q8N2K0 398 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 SCCPDHQ8NBX0 429 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 GALMQ96C23 342 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 C1orf159Q96HA4 380 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 TXNDC17Q9BRA2 123 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 RNF24Q9Y225 148 aa8.57□□□□□ -1.04
CLIP4-208ENST00000456385 TNRC6BQ9UPQ9 1833 aaKnown RBP8.56□□□□□ -1.04
CLIP4-208ENST00000456385 SAA2-SAA4A0A096LPE2 208 aa8.56□□□□□ -1.04
CLIP4-208ENST00000456385 TRBV9A0A0B4J1U6 114 aa8.56□□□□□ -1.04
CLIP4-208ENST00000456385 J3QT63 122 aa8.56□□□□□ -1.04
CLIP4-208ENST00000456385 NXPH2O95156 264 aa8.56□□□□□ -1.04
CLIP4-208ENST00000456385 P04436 131 aa8.56□□□□□ -1.04
CLIP4-208ENST00000456385 CLDN18P56856 261 aa8.56□□□□□ -1.04
CLIP4-208ENST00000456385 AESQ08117 197 aa8.56□□□□□ -1.04
CLIP4-208ENST00000456385 SSPNQ14714 243 aa8.56□□□□□ -1.04
CLIP4-208ENST00000456385 EFNB3Q15768 340 aa8.56□□□□□ -1.04
CLIP4-208ENST00000456385 FBLN7Q53RD9 439 aa8.56□□□□□ -1.04
CLIP4-208ENST00000456385 CENPWQ5EE01 88 aa8.56□□□□□ -1.04
CLIP4-208ENST00000456385 PQLC2Q6ZP29 291 aa8.56□□□□□ -1.04
CLIP4-208ENST00000456385 KLHDC1Q8N7A1 406 aa8.56□□□□□ -1.04
CLIP4-208ENST00000456385 TCTEX1D1Q8N7M0 179 aa8.56□□□□□ -1.04
CLIP4-208ENST00000456385 OR4C5Q8NGB2 326 aa8.56□□□□□ -1.04
CLIP4-208ENST00000456385 PLPPR2Q96GM1 343 aa8.56□□□□□ -1.04
CLIP4-208ENST00000456385 PHF7Q9BWX1 381 aaPredicted RBP8.56□□□□□ -1.04
CLIP4-208ENST00000456385 PKIBQ9C010 78 aa8.56□□□□□ -1.04
CLIP4-208ENST00000456385 SLC35D1Q9NTN3 355 aa8.56□□□□□ -1.04
CLIP4-208ENST00000456385 BET1LQ9NYM9 111 aa8.56□□□□□ -1.04
CLIP4-208ENST00000456385 MPC1Q9Y5U8 109 aa8.56□□□□□ -1.04
CLIP4-208ENST00000456385 TRGV10A0A0A0MS01 117 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 PINLYPA6NC86 204 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 C9JCJ5 164 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 CA1P00915 261 aaPredicted RBP8.55□□□□□ -1.04
CLIP4-208ENST00000456385 HBZP02008 142 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 GNG4P50150 75 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 TPRX1Q8N7U7 411 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 OR4P4Q8NGL7 312 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 BORCS7Q96B45 105 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 LOXL4Q96JB6 756 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 ZFHX4Q86UP3 3567 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 IGHV2-26A0A0B4J1V2 119 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 IGHV2-70DA0A0C4DH43 119 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 AHRRA9YTQ3 701 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 MT-CO3P00414 261 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 CRYBB3P26998 211 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 GDF1P27539 372 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 RELBQ01201 579 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 NRN1LQ496H8 165 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 MORN2Q502X0 79 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 Q56UQ5 140 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 STUMQ69YW2 141 aa8.55□□□□□ -1.04
CLIP4-208ENST00000456385 ZBTB34Q8NCN2 500 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms