RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 TM4SF19Q96DZ7 209 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 F2RL2O00254 374 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 UBE2L6O14933 153 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 PRICKLE3O43900 615 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-204ENST00000455883 ETHE1O95571 254 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 SLC35E4Q6ICL7 350 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 TDHQ8IZJ6 230 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 APCDD1LQ8NCL9 501 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 WSB2Q9NYS7 404 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-204ENST00000455883 TRGV5A0A0B4J1U4 118 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 F8W1H4 67 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 ATXN8Q156A1 80 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 ZNF79Q15937 498 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 RRN3P1Q2M238 152 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 UNQ9370/PRO34162Q6UXP9 181 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-204ENST00000455883 LIMS1P48059 325 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 HSPE1P61604 102 aaKnown RBP4.51□□□□□ -1.69
CSMD3-204ENST00000455883 MSRB3Q8IXL7 192 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 METTL27Q8N6F8 245 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-204ENST00000455883 ELOVL5Q9NYP7 299 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 TMEM170AQ8WVE7 144 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 RPRMQ9NS64 109 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 MRPS18CQ9Y3D5 142 aaKnown RBP4.51□□□□□ -1.69
CSMD3-204ENST00000455883 RNF222A6NCQ9 220 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 AHRRA9YTQ3 701 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 FBLN7Q53RD9 439 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 TMEM179BQ7Z7N9 219 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 SCGB3A1Q96QR1 104 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 RSRP1Q9BUV0 290 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 SLC6A13Q9NSD5 602 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 HS3ST3B1Q9Y662 390 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 M0R2P5 195 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 ACYP1P07311 99 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 CEACAM1P13688 526 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 OR4D5Q8NGN0 318 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 CITED2Q99967 270 aaPredicted RBP4.5□□□□□ -1.69
CSMD3-204ENST00000455883 ZNF703Q9H7S9 590 aaPredicted RBP4.5□□□□□ -1.69
CSMD3-204ENST00000455883 FCGR3BO75015 233 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 APOMO95445 188 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 C9orf152Q5JTZ5 239 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 OR4X1Q8NH49 305 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 ALG14Q96F25 216 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 IL36BQ9NZH7 164 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 HCFC2Q9Y5Z7 792 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 A8MWV9 139 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 H3BVH4 76 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 IZUMO1RA6ND01 250 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 HSPB6O14558 160 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 FCMRO60667 390 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 CXCL3P19876 107 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 LTC4SQ16873 150 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 WDR25Q64LD2 544 aaPredicted RBP4.5□□□□□ -1.69
CSMD3-204ENST00000455883 AMER3Q8N944 861 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 WDYHV1Q96HA8 205 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 RNF5Q99942 180 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 TRBV5-7A0A0A0MS05 114 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 F8VVB4 439 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 F8VWA3 439 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 ITGB1BP1O14713 200 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 LHX2P50458 406 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 FAM106AQ4KMX7 169 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 MDP1Q86V88 176 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 OR11H7Q8NGC8 314 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 OR2H1Q9GZK4 316 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 INSIG2Q9Y5U4 225 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 A0A1W2PPC1 479 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 ZNF324O75467 553 aaPredicted RBP4.5□□□□□ -1.69
CSMD3-204ENST00000455883 BATF2Q8N1L9 274 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 GAPTQ8N292 157 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 HES7Q9BYE0 225 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 FRRS1LQ9P0K9 344 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 H0YL77 283 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 NTN1O95631 604 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 CCL20P78556 96 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 C9orf40Q8IXQ3 194 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 EIF3GO75821 320 aaKnown RBP eCLIP4.5□□□□□ -1.69
CSMD3-204ENST00000455883 HBDP02042 147 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 IL17RELQ6ZVW7 336 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 ADAD2Q8NCV1 583 aaKnown RBP4.5□□□□□ -1.69
CSMD3-204ENST00000455883 THOC3Q96J01 351 aaKnown RBP4.5□□□□□ -1.69
CSMD3-204ENST00000455883 LOXL4Q96JB6 756 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 C20orf141Q9NUB4 165 aa4.5□□□□□ -1.69
CSMD3-204ENST00000455883 MFAP4P55083 255 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 GNB1P62873 340 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 TBR1Q16650 682 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 FAM182BQ5T319 152 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 Q6ZS49 121 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 AKIRIN1Q9H9L7 192 aaPredicted RBP4.49□□□□□ -1.69
CSMD3-204ENST00000455883 TBC1D29Q9UFV1 150 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 SIT1Q9Y3P8 196 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 WTIPA6NIX2 430 aaPredicted RBP4.49□□□□□ -1.69
CSMD3-204ENST00000455883 GAGE13Q4V321 117 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 TM4SF20Q53R12 229 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 IL17BQ9UHF5 180 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 GGTLC3B5MD39 225 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 TNFSF13O75888 250 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 ZNF788Q6ZQV5 615 aa4.49□□□□□ -1.69
CSMD3-204ENST00000455883 BTLAQ7Z6A9 289 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms