RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 NXPH3O95157 252 aa8.78□□□□□ -1
SCN9A-205ENST00000454569 IFNA21P01568 189 aa8.78□□□□□ -1
SCN9A-205ENST00000454569 APOA2P02652 100 aa8.78□□□□□ -1
SCN9A-205ENST00000454569 IL6RP08887 468 aaPredicted RBP8.78□□□□□ -1
SCN9A-205ENST00000454569 CD1BP29016 333 aa8.78□□□□□ -1
SCN9A-205ENST00000454569 MC5RP33032 325 aa8.78□□□□□ -1
SCN9A-205ENST00000454569 RPS16P62249 146 aaKnown RBP8.78□□□□□ -1
SCN9A-205ENST00000454569 FGL1Q08830 312 aa8.78□□□□□ -1
SCN9A-205ENST00000454569 PDPNQ86YL7 162 aa8.78□□□□□ -1
SCN9A-205ENST00000454569 Q8N6K4 173 aa8.78□□□□□ -1
SCN9A-205ENST00000454569 TCTEX1D1Q8N7M0 179 aa8.78□□□□□ -1
SCN9A-205ENST00000454569 OR4S2Q8NH73 311 aa8.78□□□□□ -1
SCN9A-205ENST00000454569 GRPEL2Q8TAA5 225 aa8.78□□□□□ -1
SCN9A-205ENST00000454569 IL22RA2Q969J5 263 aa8.78□□□□□ -1
SCN9A-205ENST00000454569 FLYWCH2Q96CP2 140 aaKnown RBP8.78□□□□□ -1
SCN9A-205ENST00000454569 HARBI1Q96MB7 349 aa8.78□□□□□ -1
SCN9A-205ENST00000454569 SSX3Q99909 188 aa8.78□□□□□ -1
SCN9A-205ENST00000454569 PLSCR3Q9NRY6 295 aa8.78□□□□□ -1
SCN9A-205ENST00000454569 FAM212BQ9NTI7 297 aaPredicted RBP8.78□□□□□ -1
SCN9A-205ENST00000454569 MAST4O15021 2626 aa8.77□□□□□ -1.01
SCN9A-205ENST00000454569 OOSP1A8MZH6 123 aa8.77□□□□□ -1.01
SCN9A-205ENST00000454569 SHOXO15266 292 aa8.77□□□□□ -1.01
SCN9A-205ENST00000454569 TXNL1O43396 289 aa8.77□□□□□ -1.01
SCN9A-205ENST00000454569 CRYGBP07316 175 aa8.77□□□□□ -1.01
SCN9A-205ENST00000454569 SAA1P0DJI8 122 aaPredicted RBP8.77□□□□□ -1.01
SCN9A-205ENST00000454569 KIR2DS2P43631 304 aa8.77□□□□□ -1.01
SCN9A-205ENST00000454569 CYCSP99999 105 aaKnown RBP8.77□□□□□ -1.01
SCN9A-205ENST00000454569 PJVKQ0ZLH3 352 aa8.77□□□□□ -1.01
SCN9A-205ENST00000454569 IL15RAQ13261 267 aa8.77□□□□□ -1.01
SCN9A-205ENST00000454569 EBI3Q14213 229 aa8.77□□□□□ -1.01
SCN9A-205ENST00000454569 RTL8BQ17RB0 113 aa8.77□□□□□ -1.01
SCN9A-205ENST00000454569 LRRC37A5PQ49AS3 106 aa8.77□□□□□ -1.01
SCN9A-205ENST00000454569 TMEM219Q86XT9 240 aa8.77□□□□□ -1.01
SCN9A-205ENST00000454569 OR11H4Q8NGC9 324 aa8.77□□□□□ -1.01
SCN9A-205ENST00000454569 CD300LFQ8TDQ1 290 aa8.77□□□□□ -1.01
SCN9A-205ENST00000454569 NMES1Q9C002 83 aa8.77□□□□□ -1.01
SCN9A-205ENST00000454569 PIGBOS1A0A0B4J2F0 54 aa8.76□□□□□ -1.01
SCN9A-205ENST00000454569 H3BUX3 64 aa8.76□□□□□ -1.01
SCN9A-205ENST00000454569 FCN1O00602 326 aa8.76□□□□□ -1.01
SCN9A-205ENST00000454569 SLC25A17O43808 307 aa8.76□□□□□ -1.01
SCN9A-205ENST00000454569 NQO2P16083 231 aa8.76□□□□□ -1.01
SCN9A-205ENST00000454569 VDAC1P21796 283 aa8.76□□□□□ -1.01
SCN9A-205ENST00000454569 AKR1C2P52895 323 aa8.76□□□□□ -1.01
SCN9A-205ENST00000454569 HES1Q14469 280 aa8.76□□□□□ -1.01
SCN9A-205ENST00000454569 PSG5Q15238 335 aa8.76□□□□□ -1.01
SCN9A-205ENST00000454569 LY6EQ16553 131 aa8.76□□□□□ -1.01
SCN9A-205ENST00000454569 OR4A47Q6IF82 309 aa8.76□□□□□ -1.01
SCN9A-205ENST00000454569 CLEC9AQ6UXN8 241 aa8.76□□□□□ -1.01
SCN9A-205ENST00000454569 C9orf139Q6ZV77 190 aa8.76□□□□□ -1.01
SCN9A-205ENST00000454569 PUSL1Q8N0Z8 303 aaKnown RBP8.76□□□□□ -1.01
SCN9A-205ENST00000454569 DMBX1Q8NFW5 382 aa8.76□□□□□ -1.01
SCN9A-205ENST00000454569 OR4C13Q8NGP0 309 aa8.76□□□□□ -1.01
SCN9A-205ENST00000454569 PPP1R1CQ8WVI7 109 aa8.76□□□□□ -1.01
SCN9A-205ENST00000454569 C2orf50Q96LR7 162 aa8.76□□□□□ -1.01
SCN9A-205ENST00000454569 TMEM140Q9NV12 185 aa8.76□□□□□ -1.01
SCN9A-205ENST00000454569 FAM96BQ9Y3D0 163 aa8.76□□□□□ -1.01
SCN9A-205ENST00000454569 FXYD6-FXYD2A0A087WZ82 144 aa8.75□□□□□ -1.01
SCN9A-205ENST00000454569 DUXBA0A1W2PPF3 345 aa8.75□□□□□ -1.01
SCN9A-205ENST00000454569 SH2D7A6NKC9 451 aaPredicted RBP8.75□□□□□ -1.01
SCN9A-205ENST00000454569 E7EUB6 86 aa8.75□□□□□ -1.01
SCN9A-205ENST00000454569 PITX3O75364 302 aa8.75□□□□□ -1.01
SCN9A-205ENST00000454569 MOSP00540 346 aa8.75□□□□□ -1.01
SCN9A-205ENST00000454569 IGHV4-59P01825 116 aa8.75□□□□□ -1.01
SCN9A-205ENST00000454569 FBP1P09467 338 aa8.75□□□□□ -1.01
SCN9A-205ENST00000454569 RRASP10301 218 aa8.75□□□□□ -1.01
SCN9A-205ENST00000454569 OR2B8PP59922 312 aa8.75□□□□□ -1.01
SCN9A-205ENST00000454569 SSBP2P81877 361 aaPredicted RBP8.75□□□□□ -1.01
SCN9A-205ENST00000454569 POU2AF1Q16633 256 aa8.75□□□□□ -1.01
SCN9A-205ENST00000454569 IAH1Q2TAA2 248 aaPredicted RBP8.75□□□□□ -1.01
SCN9A-205ENST00000454569 CXorf66Q5JRM2 361 aaPredicted RBP8.75□□□□□ -1.01
SCN9A-205ENST00000454569 DHRS7BQ6IAN0 325 aaPredicted RBP8.75□□□□□ -1.01
SCN9A-205ENST00000454569 CCDC144NLQ6NUI1 221 aa8.75□□□□□ -1.01
SCN9A-205ENST00000454569 C9orf62Q8N4C0 152 aa8.75□□□□□ -1.01
SCN9A-205ENST00000454569 ZBTB8BQ8NAP8 495 aaPredicted RBP8.75□□□□□ -1.01
SCN9A-205ENST00000454569 OSR1Q8TAX0 266 aaPredicted RBP8.75□□□□□ -1.01
SCN9A-205ENST00000454569 LSM10Q969L4 123 aaKnown RBP8.75□□□□□ -1.01
SCN9A-205ENST00000454569 CLCC1Q96S66 551 aa8.75□□□□□ -1.01
SCN9A-205ENST00000454569 FBXL15Q9H469 300 aa8.75□□□□□ -1.01
SCN9A-205ENST00000454569 TNFRSF19Q9NS68 423 aa8.75□□□□□ -1.01
SCN9A-205ENST00000454569 GSKIPQ9P0R6 139 aa8.75□□□□□ -1.01
SCN9A-205ENST00000454569 CACNG5Q9UF02 275 aa8.75□□□□□ -1.01
SCN9A-205ENST00000454569 TMED3Q9Y3Q3 217 aa8.75□□□□□ -1.01
SCN9A-205ENST00000454569 HSPB11Q9Y547 144 aa8.75□□□□□ -1.01
SCN9A-205ENST00000454569 MMP24Q9Y5R2 645 aa8.75□□□□□ -1.01
SCN9A-205ENST00000454569 A0A1B0GW64 132 aa8.74□□□□□ -1.01
SCN9A-205ENST00000454569 INAFM1C9JVW0 142 aa8.74□□□□□ -1.01
SCN9A-205ENST00000454569 FOSL1P15407 271 aa8.74□□□□□ -1.01
SCN9A-205ENST00000454569 TMEM11P17152 192 aa8.74□□□□□ -1.01
SCN9A-205ENST00000454569 IER3P46695 156 aa8.74□□□□□ -1.01
SCN9A-205ENST00000454569 LRRC75BQ2VPJ9 315 aa8.74□□□□□ -1.01
SCN9A-205ENST00000454569 SPINK9Q5DT21 86 aa8.74□□□□□ -1.01
SCN9A-205ENST00000454569 H2BFWTQ7Z2G1 175 aa8.74□□□□□ -1.01
SCN9A-205ENST00000454569 SIGLECL1Q8N7X8 197 aa8.74□□□□□ -1.01
SCN9A-205ENST00000454569 OR4D5Q8NGN0 318 aa8.74□□□□□ -1.01
SCN9A-205ENST00000454569 OR2T10Q8NGZ9 312 aa8.74□□□□□ -1.01
SCN9A-205ENST00000454569 THAP6Q8TBB0 222 aa8.74□□□□□ -1.01
SCN9A-205ENST00000454569 DUX5Q96PT3 197 aa8.74□□□□□ -1.01
SCN9A-205ENST00000454569 QTRT1Q9BXR0 403 aaKnown RBP8.74□□□□□ -1.01
SCN9A-205ENST00000454569 TRAV14DV4A0A0A6YYC5 116 aa8.73□□□□□ -1.01
SCN9A-205ENST00000454569 A6NDX4 124 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms