RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 TNFSF12O43508 249 aa9.85□□□□□ -0.83
CHD3-206ENST00000452447 KBTBD11O94819 623 aa9.85□□□□□ -0.83
CHD3-206ENST00000452447 HRASP01112 189 aa9.85□□□□□ -0.83
CHD3-206ENST00000452447 PPYP01298 95 aa9.85□□□□□ -0.83
CHD3-206ENST00000452447 FCER2P06734 321 aa9.85□□□□□ -0.83
CHD3-206ENST00000452447 PTHLHP12272 177 aa9.85□□□□□ -0.83
CHD3-206ENST00000452447 KIR2DS2P43631 304 aa9.85□□□□□ -0.83
CHD3-206ENST00000452447 CBX5P45973 191 aa9.85□□□□□ -0.83
CHD3-206ENST00000452447 C10orf55Q5SWW7 151 aa9.85□□□□□ -0.83
CHD3-206ENST00000452447 ZBTB34Q8NCN2 500 aa9.85□□□□□ -0.83
CHD3-206ENST00000452447 DGCR14Q96DF8 476 aaKnown RBP9.85□□□□□ -0.83
CHD3-206ENST00000452447 S100A16Q96FQ6 103 aaKnown RBP9.85□□□□□ -0.83
CHD3-206ENST00000452447 CCL28Q9NRJ3 127 aa9.85□□□□□ -0.83
CHD3-206ENST00000452447 TRBV9A0A0B4J1U6 114 aa9.84□□□□□ -0.83
CHD3-206ENST00000452447 RBMXL2O75526 392 aaKnown RBP9.84□□□□□ -0.83
CHD3-206ENST00000452447 MAS1LP35410 378 aa9.84□□□□□ -0.83
CHD3-206ENST00000452447 RPL27AP46776 148 aaKnown RBP9.84□□□□□ -0.83
CHD3-206ENST00000452447 EIF4EBP1Q13541 118 aaPredicted RBP9.84□□□□□ -0.83
CHD3-206ENST00000452447 EXOSC2Q13868 293 aaKnown RBP9.84□□□□□ -0.83
CHD3-206ENST00000452447 SSX9Q7RTT3 188 aa9.84□□□□□ -0.83
CHD3-206ENST00000452447 SGPP2Q8IWX5 399 aa9.84□□□□□ -0.83
CHD3-206ENST00000452447 NECAP1Q8NC96 275 aa9.84□□□□□ -0.83
CHD3-206ENST00000452447 TMEM167AQ8TBQ9 72 aa9.84□□□□□ -0.83
CHD3-206ENST00000452447 ISOC1Q96CN7 298 aa9.84□□□□□ -0.83
CHD3-206ENST00000452447 FYTTD1Q96QD9 318 aaKnown RBP9.84□□□□□ -0.83
CHD3-206ENST00000452447 GPHA2Q96T91 129 aa9.84□□□□□ -0.83
CHD3-206ENST00000452447 AIFM2Q9BRQ8 373 aa9.84□□□□□ -0.83
CHD3-206ENST00000452447 SLC5A7Q9GZV3 580 aa9.84□□□□□ -0.83
CHD3-206ENST00000452447 ZMAT4Q9H898 229 aa9.84□□□□□ -0.83
CHD3-206ENST00000452447 PEMTQ9UBM1 199 aa9.84□□□□□ -0.83
CHD3-206ENST00000452447 ZNF257Q9Y2Q1 563 aa9.84□□□□□ -0.83
CHD3-206ENST00000452447 HMX3A6NHT5 357 aa9.84□□□□□ -0.83
CHD3-206ENST00000452447 XRCC3O43542 346 aa9.84□□□□□ -0.83
CHD3-206ENST00000452447 FXYD4P59646 89 aa9.84□□□□□ -0.83
CHD3-206ENST00000452447 ZNF45Q02386 682 aa9.84□□□□□ -0.83
CHD3-206ENST00000452447 MSMO1Q15800 293 aa9.84□□□□□ -0.83
CHD3-206ENST00000452447 FAM209BQ5JX69 171 aa9.84□□□□□ -0.83
CHD3-206ENST00000452447 IL34Q6ZMJ4 242 aa9.84□□□□□ -0.83
CHD3-206ENST00000452447 SPAG16Q8N0X2 631 aa9.84□□□□□ -0.83
CHD3-206ENST00000452447 PUSL1Q8N0Z8 303 aaKnown RBP9.84□□□□□ -0.83
CHD3-206ENST00000452447 OR5AP2Q8NGF4 316 aa9.84□□□□□ -0.83
CHD3-206ENST00000452447 RCHY1Q96PM5 261 aa9.84□□□□□ -0.83
CHD3-206ENST00000452447 IFT46Q9NQC8 304 aa9.84□□□□□ -0.83
CHD3-206ENST00000452447 ADAM30Q9UKF2 790 aa9.84□□□□□ -0.83
CHD3-206ENST00000452447 RYR3Q15413 4870 aa9.83□□□□□ -0.84
CHD3-206ENST00000452447 MEIS3P1A6NDR6 274 aa9.83□□□□□ -0.84
CHD3-206ENST00000452447 OR2J3O76001 311 aa9.83□□□□□ -0.84
CHD3-206ENST00000452447 DHFRP00374 187 aa9.83□□□□□ -0.84
CHD3-206ENST00000452447 BRWD1-AS2P59051 145 aa9.83□□□□□ -0.84
CHD3-206ENST00000452447 RPL8P62917 257 aaKnown RBP9.83□□□□□ -0.84
CHD3-206ENST00000452447 CATR1Q13166 79 aa9.83□□□□□ -0.84
CHD3-206ENST00000452447 C15orf32Q32M92 178 aa9.83□□□□□ -0.84
CHD3-206ENST00000452447 UBE2NLQ5JXB2 153 aa9.83□□□□□ -0.84
CHD3-206ENST00000452447 HRASLSQ9HDD0 168 aa9.83□□□□□ -0.84
CHD3-206ENST00000452447 SLC2A9Q9NRM0 540 aa9.83□□□□□ -0.84
CHD3-206ENST00000452447 SIGLEC8Q9NYZ4 499 aa9.83□□□□□ -0.84
CHD3-206ENST00000452447 CEPT1Q9Y6K0 416 aa9.83□□□□□ -0.84
CHD3-206ENST00000452447 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.82□□□□□ -0.84
CHD3-206ENST00000452447 TEX22C9J3V5 150 aa9.82□□□□□ -0.84
CHD3-206ENST00000452447 E7EUB6 86 aa9.82□□□□□ -0.84
CHD3-206ENST00000452447 SULT1C2O00338 296 aa9.82□□□□□ -0.84
CHD3-206ENST00000452447 CSN3P07498 182 aa9.82□□□□□ -0.84
CHD3-206ENST00000452447 IL6RP08887 468 aaPredicted RBP9.82□□□□□ -0.84
CHD3-206ENST00000452447 IGHV4-30-4P0DP06 118 aa9.82□□□□□ -0.84
CHD3-206ENST00000452447 TGFBR1P36897 503 aa9.82□□□□□ -0.84
CHD3-206ENST00000452447 RPS19P39019 145 aaKnown RBP9.82□□□□□ -0.84
CHD3-206ENST00000452447 HERV-K104P61576 105 aa9.82□□□□□ -0.84
CHD3-206ENST00000452447 LSM3P62310 102 aaKnown RBP9.82□□□□□ -0.84
CHD3-206ENST00000452447 TMEM69Q5SWH9 247 aa9.82□□□□□ -0.84
CHD3-206ENST00000452447 OR4A47Q6IF82 309 aa9.82□□□□□ -0.84
CHD3-206ENST00000452447 LCN12Q6JVE5 192 aa9.82□□□□□ -0.84
CHD3-206ENST00000452447 GTSCR1Q86UQ5 136 aa9.82□□□□□ -0.84
CHD3-206ENST00000452447 TMEM17Q86X19 198 aa9.82□□□□□ -0.84
CHD3-206ENST00000452447 Q8N1Y9 231 aa9.82□□□□□ -0.84
CHD3-206ENST00000452447 SAMD12Q8N8I0 201 aa9.82□□□□□ -0.84
CHD3-206ENST00000452447 OR4A5Q8NH83 315 aa9.82□□□□□ -0.84
CHD3-206ENST00000452447 GIMAP1Q8WWP7 306 aa9.82□□□□□ -0.84
CHD3-206ENST00000452447 BORCS5Q969J3 196 aa9.82□□□□□ -0.84
CHD3-206ENST00000452447 PPP1R14BQ96C90 147 aa9.82□□□□□ -0.84
CHD3-206ENST00000452447 KCTD12Q96CX2 325 aaKnown RBP9.82□□□□□ -0.84
CHD3-206ENST00000452447 BET1LQ9NYM9 111 aa9.82□□□□□ -0.84
CHD3-206ENST00000452447 NPIPB5A8MRT5 1133 aa9.81□□□□□ -0.84
CHD3-206ENST00000452447 C3orf84H3BNL1 204 aa9.81□□□□□ -0.84
CHD3-206ENST00000452447 BMPR1BO00238 502 aa9.81□□□□□ -0.84
CHD3-206ENST00000452447 RBFOX2O43251 390 aaKnown RBP eCLIP9.81□□□□□ -0.84
CHD3-206ENST00000452447 ZNF735P0CB33 412 aa9.81□□□□□ -0.84
CHD3-206ENST00000452447 DEFA4P12838 97 aa9.81□□□□□ -0.84
CHD3-206ENST00000452447 HLA-GP17693 338 aa9.81□□□□□ -0.84
CHD3-206ENST00000452447 CTF1Q16619 201 aa9.81□□□□□ -0.84
CHD3-206ENST00000452447 Q8N402 240 aa9.81□□□□□ -0.84
CHD3-206ENST00000452447 AP3S1Q92572 193 aa9.81□□□□□ -0.84
CHD3-206ENST00000452447 EHFQ9NZC4 300 aa9.81□□□□□ -0.84
CHD3-206ENST00000452447 FBXL7Q9UJT9 491 aa9.81□□□□□ -0.84
CHD3-206ENST00000452447 H3BMQ9 156 aa9.8□□□□□ -0.84
CHD3-206ENST00000452447 HPRT1P00492 218 aa9.8□□□□□ -0.84
CHD3-206ENST00000452447 NQO2P16083 231 aa9.8□□□□□ -0.84
CHD3-206ENST00000452447 PSMB6P28072 239 aa9.8□□□□□ -0.84
CHD3-206ENST00000452447 TAS2R31P59538 309 aa9.8□□□□□ -0.84
CHD3-206ENST00000452447 VBP1P61758 197 aa9.8□□□□□ -0.84
CHD3-206ENST00000452447 AADACL3Q5VUY0 350 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms