RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 RBMY1BA6NDE4 496 aaKnown RBP8.19□□□□□ -1.1
USP1-204ENST00000452143 RBMY1EA6NEQ0 496 aaKnown RBP8.19□□□□□ -1.1
USP1-204ENST00000452143 TEX22C9J3V5 150 aa8.19□□□□□ -1.1
USP1-204ENST00000452143 PPP5D1E7EU14 171 aa8.19□□□□□ -1.1
USP1-204ENST00000452143 HLA-DQB1P01920 261 aa8.19□□□□□ -1.1
USP1-204ENST00000452143 RBMY1DP0C7P1 496 aaKnown RBP8.19□□□□□ -1.1
USP1-204ENST00000452143 GALP22466 123 aa8.19□□□□□ -1.1
USP1-204ENST00000452143 CRHBPP24387 322 aa8.19□□□□□ -1.1
USP1-204ENST00000452143 MAS1LP35410 378 aa8.19□□□□□ -1.1
USP1-204ENST00000452143 AQP4P55087 323 aa8.19□□□□□ -1.1
USP1-204ENST00000452143 OR10A3P58181 314 aa8.19□□□□□ -1.1
USP1-204ENST00000452143 GUCA2BQ16661 112 aa8.19□□□□□ -1.1
USP1-204ENST00000452143 ZNF367Q7RTV3 350 aa8.19□□□□□ -1.1
USP1-204ENST00000452143 LINC00528Q8N1L1 170 aa8.19□□□□□ -1.1
USP1-204ENST00000452143 TMEM167AQ8TBQ9 72 aa8.19□□□□□ -1.1
USP1-204ENST00000452143 WDR89Q96FK6 387 aaPredicted RBP8.19□□□□□ -1.1
USP1-204ENST00000452143 OR2A7Q96R45 310 aa8.19□□□□□ -1.1
USP1-204ENST00000452143 HSD17B10Q99714 261 aaKnown RBP8.19□□□□□ -1.1
USP1-204ENST00000452143 WFDC10AQ9H1F0 79 aa8.19□□□□□ -1.1
USP1-204ENST00000452143 OR51E2Q9H255 320 aa8.19□□□□□ -1.1
USP1-204ENST00000452143 DCSTAMPQ9H295 470 aa8.19□□□□□ -1.1
USP1-204ENST00000452143 SLC2A9Q9NRM0 540 aa8.19□□□□□ -1.1
USP1-204ENST00000452143 NDUFB11Q9NX14 153 aa8.19□□□□□ -1.1
USP1-204ENST00000452143 RBMX2Q9Y388 322 aaKnown RBP8.19□□□□□ -1.1
USP1-204ENST00000452143 TMEM213A2RRL7 107 aa8.18□□□□□ -1.1
USP1-204ENST00000452143 SCGNO76038 276 aa8.18□□□□□ -1.1
USP1-204ENST00000452143 IGLV2-14P01704 120 aa8.18□□□□□ -1.1
USP1-204ENST00000452143 CRYGCP07315 174 aa8.18□□□□□ -1.1
USP1-204ENST00000452143 ZNF735P0CB33 412 aa8.18□□□□□ -1.1
USP1-204ENST00000452143 RAB3BP20337 219 aa8.18□□□□□ -1.1
USP1-204ENST00000452143 CBLN1P23435 193 aa8.18□□□□□ -1.1
USP1-204ENST00000452143 ARL3P36405 182 aa8.18□□□□□ -1.1
USP1-204ENST00000452143 RPL27AP46776 148 aaKnown RBP8.18□□□□□ -1.1
USP1-204ENST00000452143 KLK9Q2XQG4 91 aa8.18□□□□□ -1.1
USP1-204ENST00000452143 ANKRD55Q3KP44 614 aa8.18□□□□□ -1.1
USP1-204ENST00000452143 HACD4Q5VWC8 232 aa8.18□□□□□ -1.1
USP1-204ENST00000452143 OR4A47Q6IF82 309 aa8.18□□□□□ -1.1
USP1-204ENST00000452143 EEF1AKMT3Q96AZ1 226 aa8.18□□□□□ -1.1
USP1-204ENST00000452143 CCDC140Q96MF4 163 aa8.18□□□□□ -1.1
USP1-204ENST00000452143 FYTTD1Q96QD9 318 aaKnown RBP8.18□□□□□ -1.1
USP1-204ENST00000452143 ATG5Q9H1Y0 275 aa8.18□□□□□ -1.1
USP1-204ENST00000452143 FBXL7Q9UJT9 491 aa8.18□□□□□ -1.1
USP1-204ENST00000452143 KLK9Q9UKQ9 250 aa8.18□□□□□ -1.1
USP1-204ENST00000452143 TRDV1A0A1B0GX56 115 aa8.17□□□□□ -1.1
USP1-204ENST00000452143 HMX3A6NHT5 357 aa8.17□□□□□ -1.1
USP1-204ENST00000452143 OR2C1O95371 312 aa8.17□□□□□ -1.1
USP1-204ENST00000452143 HLA-AP01891 365 aaKnown RBP8.17□□□□□ -1.1
USP1-204ENST00000452143 HIST1H1BP16401 226 aaKnown RBP8.17□□□□□ -1.1
USP1-204ENST00000452143 NFYAP23511 347 aaPredicted RBP8.17□□□□□ -1.1
USP1-204ENST00000452143 RPL30P62888 115 aaKnown RBP8.17□□□□□ -1.1
USP1-204ENST00000452143 FAM106AQ4KMX7 169 aa8.17□□□□□ -1.1
USP1-204ENST00000452143 OR2B11Q5JQS5 317 aa8.17□□□□□ -1.1
USP1-204ENST00000452143 ZNF57Q68EA5 555 aaPredicted RBP8.17□□□□□ -1.1
USP1-204ENST00000452143 CNIH2Q6PI25 160 aa8.17□□□□□ -1.1
USP1-204ENST00000452143 TMEM61Q8N0U2 210 aa8.17□□□□□ -1.1
USP1-204ENST00000452143 VKORC1L1Q8N0U8 176 aa8.17□□□□□ -1.1
USP1-204ENST00000452143 PUSL1Q8N0Z8 303 aaKnown RBP8.17□□□□□ -1.1
USP1-204ENST00000452143 TCTEX1D2Q8WW35 142 aa8.17□□□□□ -1.1
USP1-204ENST00000452143 MARC2Q969Z3 335 aa8.17□□□□□ -1.1
USP1-204ENST00000452143 FANCD2OSQ96PS1 177 aa8.17□□□□□ -1.1
USP1-204ENST00000452143 GGTLC1Q9BX51 225 aa8.17□□□□□ -1.1
USP1-204ENST00000452143 BLOC1S6Q9UL45 172 aa8.17□□□□□ -1.1
USP1-204ENST00000452143 FRAS1Q86XX4 4008 aa8.17□□□□□ -1.1
USP1-204ENST00000452143 TRBV7-1A0A0A6YYK4 115 aa8.16□□□□□ -1.1
USP1-204ENST00000452143 J3QRK9 145 aa8.16□□□□□ -1.1
USP1-204ENST00000452143 HRASP01112 189 aa8.16□□□□□ -1.1
USP1-204ENST00000452143 IL6RP08887 468 aaPredicted RBP8.16□□□□□ -1.1
USP1-204ENST00000452143 CTRB1P17538 263 aa8.16□□□□□ -1.1
USP1-204ENST00000452143 EDN2P20800 178 aa8.16□□□□□ -1.1
USP1-204ENST00000452143 PSMB6P28072 239 aa8.16□□□□□ -1.1
USP1-204ENST00000452143 RPL8P62917 257 aaKnown RBP8.16□□□□□ -1.1
USP1-204ENST00000452143 EIF4EBP1Q13541 118 aaPredicted RBP8.16□□□□□ -1.1
USP1-204ENST00000452143 MSMO1Q15800 293 aa8.16□□□□□ -1.1
USP1-204ENST00000452143 CDNFQ49AH0 187 aa8.16□□□□□ -1.1
USP1-204ENST00000452143 CTRB2Q6GPI1 263 aa8.16□□□□□ -1.1
USP1-204ENST00000452143 CLEC19AQ6UXS0 136 aa8.16□□□□□ -1.1
USP1-204ENST00000452143 ZNF66Q6ZN08 573 aa8.16□□□□□ -1.1
USP1-204ENST00000452143 OR52B4Q8NGK2 314 aa8.16□□□□□ -1.1
USP1-204ENST00000452143 OR4A5Q8NH83 315 aa8.16□□□□□ -1.1
USP1-204ENST00000452143 CACNG8Q8WXS5 425 aa8.16□□□□□ -1.1
USP1-204ENST00000452143 LINC00476Q8WZB0 136 aa8.16□□□□□ -1.1
USP1-204ENST00000452143 CXorf58Q96LI9 332 aa8.16□□□□□ -1.1
USP1-204ENST00000452143 AIFM2Q9BRQ8 373 aa8.16□□□□□ -1.1
USP1-204ENST00000452143 ST6GALNAC5Q9BVH7 336 aa8.16□□□□□ -1.1
USP1-204ENST00000452143 MLXQ9UH92 298 aa8.16□□□□□ -1.1
USP1-204ENST00000452143 ANXA10Q9UJ72 324 aa8.16□□□□□ -1.1
USP1-204ENST00000452143 ELF5Q9UKW6 265 aaPredicted RBP8.16□□□□□ -1.1
USP1-204ENST00000452143 SPATA2Q9UM82 520 aa8.16□□□□□ -1.1
USP1-204ENST00000452143 IGLV11-55A0A075B6I3 123 aa8.15□□□□□ -1.1
USP1-204ENST00000452143 LOC102724200A0A096LPH7 203 aaPredicted RBP8.15□□□□□ -1.1
USP1-204ENST00000452143 TRAV25A0A0B4J276 109 aa8.15□□□□□ -1.1
USP1-204ENST00000452143 IGKV1D-13A0A0B4J2D9 117 aa8.15□□□□□ -1.1
USP1-204ENST00000452143 KRTAP9-6A0A140TA67 174 aa8.15□□□□□ -1.1
USP1-204ENST00000452143 A0A1B0GW64 132 aa8.15□□□□□ -1.1
USP1-204ENST00000452143 E7EUB6 86 aa8.15□□□□□ -1.1
USP1-204ENST00000452143 NDUFB8O95169 186 aa8.15□□□□□ -1.1
USP1-204ENST00000452143 FGF2P09038 288 aa8.15□□□□□ -1.1
USP1-204ENST00000452143 IGKV1-13P0DP09 117 aa8.15□□□□□ -1.1
USP1-204ENST00000452143 DEFA4P12838 97 aa8.15□□□□□ -1.1
USP1-204ENST00000452143 AREGP15514 252 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms