RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 HOXB5P09067 269 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 SRD5A1P18405 259 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 CNTFRP26992 372 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 AKR1C2P52895 323 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 UBE2KP61086 200 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 ERVK-16P61578 105 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 C2orf68Q2NKX9 166 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 PXDC1Q5TGL8 231 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 GGNBP1Q5YKI7 109 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 FAM219AQ8IW50 185 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 VKORC1L1Q8N0U8 176 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 PUSL1Q8N0Z8 303 aaKnown RBP11.23□□□□□ -0.61
SHMT2-203ENST00000449049 ZNF680Q8NEM1 530 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 DMBX1Q8NFW5 382 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 NPBQ8NG41 125 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 RANBP3Q9H6Z4 567 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-203ENST00000449049 MMP24Q9Y5R2 645 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 SETXQ7Z333 2677 aaKnown RBP11.23□□□□□ -0.61
SHMT2-203ENST00000449049 A0A0G2JRQ6 117 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 A6NDX4 124 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 NDUFA3O95167 84 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 IGHV4-59P01825 116 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 CRYGBP07316 175 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 SAA1P0DJI8 122 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-203ENST00000449049 SULT1A3P0DMM9 295 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 SULT1A4P0DMN0 295 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 HNF4GQ14541 408 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 PSG5Q15238 335 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 OR4A47Q6IF82 309 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 SIGLECL1Q8N7X8 197 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 OR5R1Q8NH85 324 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 RRNAD1Q96FB5 475 aaKnown RBP11.23□□□□□ -0.61
SHMT2-203ENST00000449049 TMEM140Q9NV12 185 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 NBR2O15453 112 aa11.22□□□□□ -0.61
SHMT2-203ENST00000449049 TSC22D2O75157 780 aa11.22□□□□□ -0.61
SHMT2-203ENST00000449049 IFNA21P01568 189 aa11.22□□□□□ -0.61
SHMT2-203ENST00000449049 F2RL1P55085 397 aa11.22□□□□□ -0.61
SHMT2-203ENST00000449049 FCN2Q15485 313 aa11.22□□□□□ -0.61
SHMT2-203ENST00000449049 MMDQ15546 238 aa11.22□□□□□ -0.61
SHMT2-203ENST00000449049 VMA21Q3ZAQ7 101 aa11.22□□□□□ -0.61
SHMT2-203ENST00000449049 SSX9Q7RTT3 188 aa11.22□□□□□ -0.61
SHMT2-203ENST00000449049 H2BFWTQ7Z2G1 175 aa11.22□□□□□ -0.61
SHMT2-203ENST00000449049 OR5M8Q8NGP6 311 aa11.22□□□□□ -0.61
SHMT2-203ENST00000449049 RNASE11Q8TAA1 199 aaKnown RBP11.22□□□□□ -0.61
SHMT2-203ENST00000449049 VSTM2AQ8TAG5 236 aa11.22□□□□□ -0.61
SHMT2-203ENST00000449049 GPR146Q96CH1 333 aa11.22□□□□□ -0.61
SHMT2-203ENST00000449049 BET1LQ9NYM9 111 aa11.22□□□□□ -0.61
SHMT2-203ENST00000449049 CCSO14618 274 aa11.21□□□□□ -0.61
SHMT2-203ENST00000449049 GOSR2O14653 212 aa11.21□□□□□ -0.61
SHMT2-203ENST00000449049 TEX45Q8NA69 505 aa11.21□□□□□ -0.61
SHMT2-203ENST00000449049 OR11H7Q8NGC8 314 aa11.21□□□□□ -0.61
SHMT2-203ENST00000449049 SSMEM1Q8WWF3 244 aa11.21□□□□□ -0.61
SHMT2-203ENST00000449049 RBM14Q96PK6 669 aaKnown RBP11.21□□□□□ -0.61
SHMT2-203ENST00000449049 MGAT4CQ9UBM8 478 aa11.21□□□□□ -0.61
SHMT2-203ENST00000449049 PITPNC1Q9UKF7 332 aa11.21□□□□□ -0.61
SHMT2-203ENST00000449049 MPTX1A8MV57 137 aa11.21□□□□□ -0.62
SHMT2-203ENST00000449049 RRHO14718 337 aa11.21□□□□□ -0.62
SHMT2-203ENST00000449049 SLC25A17O43808 307 aa11.21□□□□□ -0.62
SHMT2-203ENST00000449049 SCO1O75880 301 aa11.21□□□□□ -0.62
SHMT2-203ENST00000449049 OR2F2O95006 317 aa11.21□□□□□ -0.62
SHMT2-203ENST00000449049 OR2A4O95047 310 aa11.21□□□□□ -0.62
SHMT2-203ENST00000449049 OR9G9P0C7N8 305 aa11.21□□□□□ -0.62
SHMT2-203ENST00000449049 SLC25A6P12236 298 aa11.21□□□□□ -0.62
SHMT2-203ENST00000449049 OR4A5Q8NH83 315 aa11.21□□□□□ -0.62
SHMT2-203ENST00000449049 OR2A7Q96R45 310 aa11.21□□□□□ -0.62
SHMT2-203ENST00000449049 C1RLQ9NZP8 487 aa11.21□□□□□ -0.62
SHMT2-203ENST00000449049 HOXA3O43365 443 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-203ENST00000449049 KBTBD11O94819 623 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 CXCL3P19876 107 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 IZUMO4Q1ZYL8 232 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 Q6ZRM9 215 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 LILRB2Q8N423 598 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 FAM71E2Q8N5Q1 922 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 TMEM167AQ8TBQ9 72 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 OR10C1Q96KK4 312 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 SLC25A33Q9BSK2 321 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 COA4Q9NYJ1 87 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 KIAA1456Q9P272 454 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 METTL1Q9UBP6 276 aaKnown RBP11.2□□□□□ -0.62
SHMT2-203ENST00000449049 SIGLEC9Q9Y336 463 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 POMT1Q9Y6A1 747 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 ANK3Q12955 4377 aaKnown RBP11.2□□□□□ -0.62
SHMT2-203ENST00000449049 A0A1B0GU03 582 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 BTBD17A6NE02 478 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 I3L521 148 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 UPK2O00526 184 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 H2BFSP57053 126 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 RELBQ01201 579 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 LY6EQ16553 131 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 MRGPRG-AS1Q2M3A8 158 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 TMEM65Q6PI78 240 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 GSG1LQ6UXU4 331 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 C16orf82Q7Z2V1 217 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 TMEM219Q86XT9 240 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 TMEM86BQ8N661 226 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 Q8N9W7 124 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 SPIN2AQ99865 258 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 SPIN2BQ9BPZ2 258 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 FBXL15Q9H469 300 aa11.2□□□□□ -0.62
SHMT2-203ENST00000449049 TPSG1Q9NRR2 321 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms