RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 Q96M66 194 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 TXNIPQ9H3M7 391 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 H0Y980 276 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 NRG2O14511 850 aaPredicted RBP8.99□□□□□ -0.97
LINC00342-202ENST00000448494 RER1O15258 196 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 IGKV1D-16P01601 117 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 OR5AL1P0C617 328 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 SMIM13P0DJ93 91 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 FGF6P10767 208 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 CCL1P22362 96 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 CFHR2P36980 270 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 GAB4Q2WGN9 574 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 ABHD17BQ5VST6 288 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 LHX8Q68G74 356 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 ZNF645Q8N7E2 425 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 OR2A1Q8NGT9 310 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 MBNL3Q9NUK0 354 aaKnown RBP8.99□□□□□ -0.97
LINC00342-202ENST00000448494 TECRQ9NZ01 308 aaKnown RBP8.99□□□□□ -0.97
LINC00342-202ENST00000448494 RABAC1Q9UI14 185 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 KCNS2Q9ULS6 477 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 HILPDAQ9Y5L2 63 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 COL4A2P08572 1712 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 KMT2EQ8IZD2 1858 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 OBSL1O75147 1896 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 IGKV1-9A0A0C4DH69 117 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 OR7C1O76099 320 aaPredicted RBP8.99□□□□□ -0.97
LINC00342-202ENST00000448494 MT-ATP8P03928 68 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 CT45A6P0DMU7 189 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 CT45A5P0DMU8 189 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 CT45A7P0DMV0 189 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 TMPRSS3P57727 454 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 CT45A1Q5HYN5 189 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 CT45A3Q8NHU0 189 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 GLMPQ8WWB7 406 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 CHCHD1Q96BP2 118 aaKnown RBP8.99□□□□□ -0.97
LINC00342-202ENST00000448494 MAP1LC3CQ9BXW4 147 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 OSTCQ9NRP0 149 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 ERRFI1Q9UJM3 462 aaPredicted RBP8.99□□□□□ -0.97
LINC00342-202ENST00000448494 R4GN57 208 aa8.99□□□□□ -0.97
LINC00342-202ENST00000448494 TRGV10A0A0A0MS01 117 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 FABP5P3A8MUU1 101 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 OR2J3O76001 311 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 NEURL1O76050 574 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 MGAT2Q10469 447 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 DUSP28Q4G0W2 176 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 PDLIM3Q53GG5 364 aaPredicted RBP8.98□□□□□ -0.97
LINC00342-202ENST00000448494 HLA-DQA1Q5Y7H0 255 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 TEPPQ6URK8 271 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 ATP6V0E2Q8NHE4 81 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 GTSF1Q8WW33 167 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 DDB2Q92466 427 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 BADQ92934 168 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 TMEM147Q9BVK8 224 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 COL25A1Q9BXS0 654 aaPredicted RBP8.98□□□□□ -0.97
LINC00342-202ENST00000448494 TMEM133Q9H2Q1 129 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 ZNF331Q9NQX6 463 aaPredicted RBP8.98□□□□□ -0.97
LINC00342-202ENST00000448494 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.98□□□□□ -0.97
LINC00342-202ENST00000448494 SCO2A0A1W2PP80 73 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 A0A1W2PQM1 296 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 SMIM27A0A1W2PRY6 76 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 IZUMO1RA6ND01 250 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 C11orf98E9PRG8 122 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 LEPROTL1O95214 131 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 FCGR2BP31994 310 aaPredicted RBP8.98□□□□□ -0.97
LINC00342-202ENST00000448494 KIR2DS4P43632 304 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 VDAC2P45880 294 aaPredicted RBP8.98□□□□□ -0.97
LINC00342-202ENST00000448494 VGLL4Q14135 290 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 SGCBQ16585 318 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 ETDBQ3ZM63 59 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 DMRTC1Q5HYR2 192 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 CARD17Q5XLA6 110 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 ZFAND6Q6FIF0 208 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 CRIP3Q6Q6R5 217 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 ZBTB34Q8NCN2 500 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 OR1L1Q8NH94 360 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 C11orf52Q96A22 123 aa8.98□□□□□ -0.97
LINC00342-202ENST00000448494 SCN3AQ9NY46 2000 aa8.97□□□□□ -0.97
LINC00342-202ENST00000448494 KIAA0100Q14667 2235 aaKnown RBP8.97□□□□□ -0.97
LINC00342-202ENST00000448494 HTTP42858 3142 aa8.97□□□□□ -0.97
LINC00342-202ENST00000448494 ZNF816-ZNF321PA0A0X1KG74 233 aa8.97□□□□□ -0.97
LINC00342-202ENST00000448494 FOXS1O43638 330 aa8.97□□□□□ -0.97
LINC00342-202ENST00000448494 RPS18P62269 152 aaKnown RBP8.97□□□□□ -0.97
LINC00342-202ENST00000448494 CATR1Q13166 79 aa8.97□□□□□ -0.97
LINC00342-202ENST00000448494 LINC01545Q5VT33 79 aa8.97□□□□□ -0.97
LINC00342-202ENST00000448494 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.97□□□□□ -0.97
LINC00342-202ENST00000448494 GTF3C1Q12789 2109 aa8.97□□□□□ -0.97
LINC00342-202ENST00000448494 A1L4Q6 167 aa8.97□□□□□ -0.97
LINC00342-202ENST00000448494 SPINK4O60575 86 aa8.97□□□□□ -0.97
LINC00342-202ENST00000448494 FOXH1O75593 365 aa8.97□□□□□ -0.97
LINC00342-202ENST00000448494 IAPPP10997 89 aa8.97□□□□□ -0.97
LINC00342-202ENST00000448494 FOXE3Q13461 319 aa8.97□□□□□ -0.97
LINC00342-202ENST00000448494 ZNF146Q15072 292 aa8.97□□□□□ -0.97
LINC00342-202ENST00000448494 SH2D6Q7Z4S9 175 aa8.97□□□□□ -0.97
LINC00342-202ENST00000448494 TEX45Q8NA69 505 aa8.97□□□□□ -0.97
LINC00342-202ENST00000448494 SYT8Q8NBV8 401 aa8.97□□□□□ -0.97
LINC00342-202ENST00000448494 C20orf78Q9BR46 151 aa8.97□□□□□ -0.97
LINC00342-202ENST00000448494 TIMM29Q9BSF4 260 aa8.97□□□□□ -0.97
LINC00342-202ENST00000448494 PHF3Q92576 2039 aaKnown RBP8.96□□□□□ -0.97
LINC00342-202ENST00000448494 CENPVL3A0A0U1RRI6 287 aa8.96□□□□□ -0.98
LINC00342-202ENST00000448494 KIR2DS3K7RE56 304 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms