RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 FAM122AQ96E09 287 aa12.8□□□□□ -0.36
SNX13-204ENST00000444712 MRPL20Q9BYC9 149 aaKnown RBP12.8□□□□□ -0.36
SNX13-204ENST00000444712 EIF5A2Q9GZV4 153 aaKnown RBP12.8□□□□□ -0.36
SNX13-204ENST00000444712 KIAA1456Q9P272 454 aa12.8□□□□□ -0.36
SNX13-204ENST00000444712 KPTNQ9Y664 436 aa12.8□□□□□ -0.36
SNX13-204ENST00000444712 TET2Q6N021 2002 aaPredicted RBP12.8□□□□□ -0.36
SNX13-204ENST00000444712 TRAV1-1A0A0B4J248 108 aa12.79□□□□□ -0.36
SNX13-204ENST00000444712 C17orf112F2Z3M2 114 aa12.79□□□□□ -0.36
SNX13-204ENST00000444712 H0YJW9 148 aa12.79□□□□□ -0.36
SNX13-204ENST00000444712 SNAPINO95295 136 aa12.79□□□□□ -0.36
SNX13-204ENST00000444712 MBP02144 154 aa12.79□□□□□ -0.36
SNX13-204ENST00000444712 IL6RP08887 468 aaPredicted RBP12.79□□□□□ -0.36
SNX13-204ENST00000444712 SFTA3P0C7M3 94 aa12.79□□□□□ -0.36
SNX13-204ENST00000444712 PRRX1P54821 245 aa12.79□□□□□ -0.36
SNX13-204ENST00000444712 TMEM177Q53S58 311 aa12.79□□□□□ -0.36
SNX13-204ENST00000444712 SPINK9Q5DT21 86 aa12.79□□□□□ -0.36
SNX13-204ENST00000444712 ABHD12Q8N2K0 398 aa12.79□□□□□ -0.36
SNX13-204ENST00000444712 VSTM2AQ8TAG5 236 aa12.79□□□□□ -0.36
SNX13-204ENST00000444712 NKX6-2Q9C056 277 aaPredicted RBP12.79□□□□□ -0.36
SNX13-204ENST00000444712 H7C2Y5 167 aa12.79□□□□□ -0.36
SNX13-204ENST00000444712 UPK2O00526 184 aa12.79□□□□□ -0.36
SNX13-204ENST00000444712 ADCYAP1P18509 176 aa12.79□□□□□ -0.36
SNX13-204ENST00000444712 MC5RP33032 325 aa12.79□□□□□ -0.36
SNX13-204ENST00000444712 ATP5IP56385 69 aaPredicted RBP12.79□□□□□ -0.36
SNX13-204ENST00000444712 TMEM41BQ5BJD5 291 aa12.79□□□□□ -0.36
SNX13-204ENST00000444712 ZNF709Q8N972 641 aa12.79□□□□□ -0.36
SNX13-204ENST00000444712 OR4C13Q8NGP0 309 aa12.79□□□□□ -0.36
SNX13-204ENST00000444712 OR4A5Q8NH83 315 aa12.79□□□□□ -0.36
SNX13-204ENST00000444712 CHODLQ9H9P2 273 aa12.79□□□□□ -0.36
SNX13-204ENST00000444712 TRAV3A0A0B4J244 114 aa12.78□□□□□ -0.36
SNX13-204ENST00000444712 MPDU1O75352 247 aa12.78□□□□□ -0.36
SNX13-204ENST00000444712 SOD3P08294 240 aa12.78□□□□□ -0.36
SNX13-204ENST00000444712 PLA2G5P39877 138 aa12.78□□□□□ -0.36
SNX13-204ENST00000444712 UQCRFS1P47985 274 aa12.78□□□□□ -0.36
SNX13-204ENST00000444712 ERVFRD-1P60508 538 aa12.78□□□□□ -0.36
SNX13-204ENST00000444712 WDR25Q64LD2 544 aaPredicted RBP12.78□□□□□ -0.36
SNX13-204ENST00000444712 TGIF2LXQ8IUE1 241 aa12.78□□□□□ -0.36
SNX13-204ENST00000444712 ST6GALNAC6Q969X2 333 aa12.78□□□□□ -0.36
SNX13-204ENST00000444712 FLYWCH2Q96CP2 140 aaKnown RBP12.78□□□□□ -0.36
SNX13-204ENST00000444712 HARBI1Q96MB7 349 aa12.78□□□□□ -0.36
SNX13-204ENST00000444712 NABP2Q9BQ15 211 aa12.78□□□□□ -0.36
SNX13-204ENST00000444712 WASHC3Q9Y3C0 194 aa12.78□□□□□ -0.36
SNX13-204ENST00000444712 OR51B2Q9Y5P1 312 aa12.78□□□□□ -0.36
SNX13-204ENST00000444712 RFNGQ9Y644 331 aa12.78□□□□□ -0.36
SNX13-204ENST00000444712 PPIAL4CA0A0B4J2A2 164 aa12.78□□□□□ -0.36
SNX13-204ENST00000444712 KBTBD11O94819 623 aa12.78□□□□□ -0.36
SNX13-204ENST00000444712 PPIAL4GP0DN37 164 aa12.78□□□□□ -0.36
SNX13-204ENST00000444712 FGF7P21781 194 aa12.78□□□□□ -0.36
SNX13-204ENST00000444712 AVPI1Q5T686 147 aa12.78□□□□□ -0.36
SNX13-204ENST00000444712 OR5B3Q8NH48 314 aa12.78□□□□□ -0.36
SNX13-204ENST00000444712 LHX4Q969G2 390 aa12.78□□□□□ -0.36
SNX13-204ENST00000444712 ZNRD1Q9P1U0 126 aa12.78□□□□□ -0.36
SNX13-204ENST00000444712 PIEZO1Q92508 2521 aa12.77□□□□□ -0.36
SNX13-204ENST00000444712 GOSR1O95249 250 aa12.77□□□□□ -0.37
SNX13-204ENST00000444712 IGKV1-16P04430 117 aa12.77□□□□□ -0.37
SNX13-204ENST00000444712 LIPFP07098 398 aa12.77□□□□□ -0.37
SNX13-204ENST00000444712 DLK1P80370 383 aa12.77□□□□□ -0.37
SNX13-204ENST00000444712 SPSB3Q6PJ21 355 aa12.77□□□□□ -0.37
SNX13-204ENST00000444712 ETV3LQ6ZN32 361 aa12.77□□□□□ -0.37
SNX13-204ENST00000444712 C11orf42Q8N5U0 333 aa12.77□□□□□ -0.37
SNX13-204ENST00000444712 SFT2D1Q8WV19 159 aa12.77□□□□□ -0.37
SNX13-204ENST00000444712 CLEC7AQ9BXN2 247 aa12.77□□□□□ -0.37
SNX13-204ENST00000444712 MS4A7Q9GZW8 240 aaPredicted RBP12.77□□□□□ -0.37
SNX13-204ENST00000444712 AMMECR1Q9Y4X0 333 aaPredicted RBP12.77□□□□□ -0.37
SNX13-204ENST00000444712 COL6A6A6NMZ7 2263 aa12.76□□□□□ -0.37
SNX13-204ENST00000444712 FAM157AC9JC47 383 aa12.76□□□□□ -0.37
SNX13-204ENST00000444712 SAA1P0DJI8 122 aaPredicted RBP12.76□□□□□ -0.37
SNX13-204ENST00000444712 USF1P22415 310 aaPredicted RBP12.76□□□□□ -0.37
SNX13-204ENST00000444712 CD1BP29016 333 aa12.76□□□□□ -0.37
SNX13-204ENST00000444712 PRCDQ00LT1 54 aa12.76□□□□□ -0.37
SNX13-204ENST00000444712 BEND2Q8NDZ0 799 aa12.76□□□□□ -0.37
SNX13-204ENST00000444712 SLC24A4Q8NFF2 622 aa12.76□□□□□ -0.37
SNX13-204ENST00000444712 MBD3L1Q8WWY6 194 aa12.76□□□□□ -0.37
SNX13-204ENST00000444712 SCRT1Q9BWW7 348 aa12.76□□□□□ -0.37
SNX13-204ENST00000444712 PLEKHA3Q9HB20 300 aa12.76□□□□□ -0.37
SNX13-204ENST00000444712 RPRMQ9NS64 109 aa12.76□□□□□ -0.37
SNX13-204ENST00000444712 CACNA1AO00555 2505 aa12.76□□□□□ -0.37
SNX13-204ENST00000444712 ATRXP46100 2492 aa12.76□□□□□ -0.37
SNX13-204ENST00000444712 NCOR2Q9Y618 2525 aa12.76□□□□□ -0.37
SNX13-204ENST00000444712 IGHV2-26A0A0B4J1V2 119 aa12.76□□□□□ -0.37
SNX13-204ENST00000444712 RBFOX3A6NFN3 312 aa12.76□□□□□ -0.37
SNX13-204ENST00000444712 NPY1RP25929 384 aa12.76□□□□□ -0.37
SNX13-204ENST00000444712 PPT1P50897 306 aa12.76□□□□□ -0.37
SNX13-204ENST00000444712 BTN1A1Q13410 526 aa12.76□□□□□ -0.37
SNX13-204ENST00000444712 SP5Q6BEB4 398 aaPredicted RBP12.76□□□□□ -0.37
SNX13-204ENST00000444712 UNKLQ9H9P5 680 aaKnown RBP12.76□□□□□ -0.37
SNX13-204ENST00000444712 MDKP21741 143 aaPredicted RBP12.75□□□□□ -0.37
SNX13-204ENST00000444712 HLA-DRB5Q30154 266 aa12.75□□□□□ -0.37
SNX13-204ENST00000444712 LY6G5BQ8NDX9 201 aa12.75□□□□□ -0.37
SNX13-204ENST00000444712 NPCDR1Q9BY65 106 aa12.75□□□□□ -0.37
SNX13-204ENST00000444712 SLC35B3Q9H1N7 401 aa12.75□□□□□ -0.37
SNX13-204ENST00000444712 PATZ1Q9HBE1 687 aaKnown RBP12.75□□□□□ -0.37
SNX13-204ENST00000444712 KCNIP2Q9NS61 270 aa12.75□□□□□ -0.37
SNX13-204ENST00000444712 WDR83OSQ9Y284 106 aa12.75□□□□□ -0.37
SNX13-204ENST00000444712 FNDC10F2Z333 226 aa12.74□□□□□ -0.37
SNX13-204ENST00000444712 IFNA4P05014 189 aa12.74□□□□□ -0.37
SNX13-204ENST00000444712 GUCA2BQ16661 112 aa12.74□□□□□ -0.37
SNX13-204ENST00000444712 A0A1B0GV50 99 aa12.74□□□□□ -0.37
SNX13-204ENST00000444712 SRRM4A7MD48 611 aaKnown RBP12.74□□□□□ -0.37
SNX13-204ENST00000444712 IGLV1-47P01700 117 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms