RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 ECSCRQ19T08 205 aa11.12□□□□□ -0.63
SSBP3-208ENST00000444533 C2orf68Q2NKX9 166 aa11.12□□□□□ -0.63
SSBP3-208ENST00000444533 ZNF329Q86UD4 541 aa11.12□□□□□ -0.63
SSBP3-208ENST00000444533 VKORC1L1Q8N0U8 176 aa11.12□□□□□ -0.63
SSBP3-208ENST00000444533 RNASE11Q8TAA1 199 aaKnown RBP11.12□□□□□ -0.63
SSBP3-208ENST00000444533 TSC22D3Q99576 134 aa11.12□□□□□ -0.63
SSBP3-208ENST00000444533 SPIN2AQ99865 258 aa11.12□□□□□ -0.63
SSBP3-208ENST00000444533 SPIN2BQ9BPZ2 258 aa11.12□□□□□ -0.63
SSBP3-208ENST00000444533 AKIP1Q9NQ31 210 aa11.12□□□□□ -0.63
SSBP3-208ENST00000444533 BET1LQ9NYM9 111 aa11.12□□□□□ -0.63
SSBP3-208ENST00000444533 WSB1Q9Y6I7 421 aa11.12□□□□□ -0.63
SSBP3-208ENST00000444533 LINC01548A6NM66 108 aa11.11□□□□□ -0.63
SSBP3-208ENST00000444533 MARCH11A6NNE9 402 aa11.11□□□□□ -0.63
SSBP3-208ENST00000444533 KRASP01116 189 aa11.11□□□□□ -0.63
SSBP3-208ENST00000444533 CRYGBP07316 175 aa11.11□□□□□ -0.63
SSBP3-208ENST00000444533 ELANEP08246 267 aa11.11□□□□□ -0.63
SSBP3-208ENST00000444533 RPL8P62917 257 aaKnown RBP11.11□□□□□ -0.63
SSBP3-208ENST00000444533 AKIRIN2Q53H80 203 aa11.11□□□□□ -0.63
SSBP3-208ENST00000444533 UNQ5815/PRO19632Q6UWF5 114 aa11.11□□□□□ -0.63
SSBP3-208ENST00000444533 H2BFWTQ7Z2G1 175 aa11.11□□□□□ -0.63
SSBP3-208ENST00000444533 NDUFA11Q86Y39 141 aa11.11□□□□□ -0.63
SSBP3-208ENST00000444533 TMEM167AQ8TBQ9 72 aa11.11□□□□□ -0.63
SSBP3-208ENST00000444533 COMMD5Q9GZQ3 224 aa11.11□□□□□ -0.63
SSBP3-208ENST00000444533 ZNF430Q9H8G1 570 aaPredicted RBP11.11□□□□□ -0.63
SSBP3-208ENST00000444533 TPSG1Q9NRR2 321 aa11.11□□□□□ -0.63
SSBP3-208ENST00000444533 GPR132Q9UNW8 380 aa11.11□□□□□ -0.63
SSBP3-208ENST00000444533 FOXA2Q9Y261 457 aaPredicted RBP11.11□□□□□ -0.63
SSBP3-208ENST00000444533 TSSC4Q9Y5U2 329 aaPredicted RBP11.11□□□□□ -0.63
SSBP3-208ENST00000444533 A0A1W2PN81 502 aa11.1□□□□□ -0.63
SSBP3-208ENST00000444533 RBMXL2O75526 392 aaKnown RBP11.1□□□□□ -0.63
SSBP3-208ENST00000444533 CD28P10747 220 aa11.1□□□□□ -0.63
SSBP3-208ENST00000444533 AKR1C4P17516 323 aa11.1□□□□□ -0.63
SSBP3-208ENST00000444533 CHRNA7P36544 502 aa11.1□□□□□ -0.63
SSBP3-208ENST00000444533 AKR1C2P52895 323 aa11.1□□□□□ -0.63
SSBP3-208ENST00000444533 BRWD1-AS2P59051 145 aa11.1□□□□□ -0.63
SSBP3-208ENST00000444533 DHODHQ02127 395 aa11.1□□□□□ -0.63
SSBP3-208ENST00000444533 SRSF4Q08170 494 aaKnown RBP11.1□□□□□ -0.63
SSBP3-208ENST00000444533 FOXE3Q13461 319 aa11.1□□□□□ -0.63
SSBP3-208ENST00000444533 POU2AF1Q16633 256 aa11.1□□□□□ -0.63
SSBP3-208ENST00000444533 OR4A47Q6IF82 309 aa11.1□□□□□ -0.63
SSBP3-208ENST00000444533 TMED4Q7Z7H5 227 aa11.1□□□□□ -0.63
SSBP3-208ENST00000444533 SLC25A42Q86VD7 318 aa11.1□□□□□ -0.63
SSBP3-208ENST00000444533 PUSL1Q8N0Z8 303 aaKnown RBP11.1□□□□□ -0.63
SSBP3-208ENST00000444533 OR5M8Q8NGP6 311 aa11.1□□□□□ -0.63
SSBP3-208ENST00000444533 RRNAD1Q96FB5 475 aaKnown RBP11.1□□□□□ -0.63
SSBP3-208ENST00000444533 NAA60Q9H7X0 242 aa11.1□□□□□ -0.63
SSBP3-208ENST00000444533 ZNF355PQ9NSJ1 428 aa11.1□□□□□ -0.63
SSBP3-208ENST00000444533 ZFP57Q9NU63 452 aa11.1□□□□□ -0.63
SSBP3-208ENST00000444533 TMEM140Q9NV12 185 aa11.1□□□□□ -0.63
SSBP3-208ENST00000444533 FKBP11Q9NYL4 201 aa11.1□□□□□ -0.63
SSBP3-208ENST00000444533 FGF2P09038 288 aa11.09□□□□□ -0.63
SSBP3-208ENST00000444533 PF4V1P10720 104 aa11.09□□□□□ -0.63
SSBP3-208ENST00000444533 HLA-GP17693 338 aa11.09□□□□□ -0.63
SSBP3-208ENST00000444533 G6PCP35575 357 aa11.09□□□□□ -0.63
SSBP3-208ENST00000444533 RPL27AP46776 148 aaKnown RBP11.09□□□□□ -0.63
SSBP3-208ENST00000444533 CRIP2P52943 208 aaPredicted RBP11.09□□□□□ -0.63
SSBP3-208ENST00000444533 SRPXP78539 464 aa11.09□□□□□ -0.63
SSBP3-208ENST00000444533 PJVKQ0ZLH3 352 aa11.09□□□□□ -0.63
SSBP3-208ENST00000444533 NSUN5P1Q3KNT7 163 aa11.09□□□□□ -0.63
SSBP3-208ENST00000444533 MZT2BQ6NZ67 158 aa11.09□□□□□ -0.63
SSBP3-208ENST00000444533 ZNF695Q8IW36 515 aa11.09□□□□□ -0.63
SSBP3-208ENST00000444533 MRPL41Q8IXM3 137 aaKnown RBP11.09□□□□□ -0.63
SSBP3-208ENST00000444533 LFNGQ8NES3 379 aa11.09□□□□□ -0.63
SSBP3-208ENST00000444533 SRSF12Q8WXF0 261 aaKnown RBP11.09□□□□□ -0.63
SSBP3-208ENST00000444533 CITED2Q99967 270 aaPredicted RBP11.09□□□□□ -0.63
SSBP3-208ENST00000444533 RTBDNQ9BSG5 229 aaPredicted RBP11.09□□□□□ -0.63
SSBP3-208ENST00000444533 FAM103A1Q9BTL3 118 aaKnown RBP11.09□□□□□ -0.63
SSBP3-208ENST00000444533 C5orf66Q9H5L9 145 aa11.09□□□□□ -0.63
SSBP3-208ENST00000444533 MSGN1A6NI15 193 aa11.08□□□□□ -0.64
SSBP3-208ENST00000444533 CRYM-AS1A6NIL9 109 aa11.08□□□□□ -0.64
SSBP3-208ENST00000444533 NUDT19A8MXV4 375 aa11.08□□□□□ -0.64
SSBP3-208ENST00000444533 G3V318 75 aa11.08□□□□□ -0.64
SSBP3-208ENST00000444533 DHFRP00374 187 aa11.08□□□□□ -0.64
SSBP3-208ENST00000444533 IGHG4P01861 327 aa11.08□□□□□ -0.64
SSBP3-208ENST00000444533 RAB25P57735 213 aa11.08□□□□□ -0.64
SSBP3-208ENST00000444533 KRTAP10-3P60369 221 aa11.08□□□□□ -0.64
SSBP3-208ENST00000444533 ZNF585BQ52M93 769 aa11.08□□□□□ -0.64
SSBP3-208ENST00000444533 TMEM128Q5BJH2 165 aa11.08□□□□□ -0.64
SSBP3-208ENST00000444533 CADM3Q8N126 398 aa11.08□□□□□ -0.64
SSBP3-208ENST00000444533 CENPSQ8N2Z9 138 aa11.08□□□□□ -0.64
SSBP3-208ENST00000444533 OR4F17Q8NGA8 305 aa11.08□□□□□ -0.64
SSBP3-208ENST00000444533 OR4A16Q8NH70 328 aa11.08□□□□□ -0.64
SSBP3-208ENST00000444533 MRGPRFQ96AM1 343 aa11.08□□□□□ -0.64
SSBP3-208ENST00000444533 FYTTD1Q96QD9 318 aaKnown RBP11.08□□□□□ -0.64
SSBP3-208ENST00000444533 OR4F4Q96R69 305 aa11.08□□□□□ -0.64
SSBP3-208ENST00000444533 TP53RKQ96S44 253 aa11.08□□□□□ -0.64
SSBP3-208ENST00000444533 SDHCQ99643 169 aaPredicted RBP11.08□□□□□ -0.64
SSBP3-208ENST00000444533 PRNDQ9UKY0 176 aa11.08□□□□□ -0.64
SSBP3-208ENST00000444533 VSIG4Q9Y279 399 aa11.08□□□□□ -0.64
SSBP3-208ENST00000444533 NUBP2Q9Y5Y2 271 aa11.08□□□□□ -0.64
SSBP3-208ENST00000444533 STAB1Q9NY15 2570 aa11.07□□□□□ -0.64
SSBP3-208ENST00000444533 A0A1W2PRX2 142 aa11.07□□□□□ -0.64
SSBP3-208ENST00000444533 UPK2O00526 184 aa11.07□□□□□ -0.64
SSBP3-208ENST00000444533 ARPC1BO15143 372 aaKnown RBP11.07□□□□□ -0.64
SSBP3-208ENST00000444533 CYB5BO43169 146 aa11.07□□□□□ -0.64
SSBP3-208ENST00000444533 LYRM1O43325 122 aa11.07□□□□□ -0.64
SSBP3-208ENST00000444533 OR5AC1P0C628 307 aa11.07□□□□□ -0.64
SSBP3-208ENST00000444533 SLC6A1P30531 599 aa11.07□□□□□ -0.64
SSBP3-208ENST00000444533 NDPQ00604 133 aa11.07□□□□□ -0.64
SSBP3-208ENST00000444533 CD83Q01151 205 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms