RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 TNFRSF19Q9NS68 423 aa8.81□□□□□ -1
CALD1-210ENST00000443197 SLC31A2O15432 143 aa8.8□□□□□ -1
CALD1-210ENST00000443197 CD24P25063 80 aa8.8□□□□□ -1
CALD1-210ENST00000443197 HSPE1P61604 102 aaKnown RBP8.8□□□□□ -1
CALD1-210ENST00000443197 RPL8P62917 257 aaKnown RBP8.8□□□□□ -1
CALD1-210ENST00000443197 TMEM41BQ5BJD5 291 aa8.8□□□□□ -1
CALD1-210ENST00000443197 TEPPQ6URK8 271 aa8.8□□□□□ -1
CALD1-210ENST00000443197 SMIM8Q96KF7 97 aa8.8□□□□□ -1
CALD1-210ENST00000443197 TMPRSS5Q9H3S3 457 aa8.8□□□□□ -1
CALD1-210ENST00000443197 LINC00473A8K010 186 aa8.8□□□□□ -1
CALD1-210ENST00000443197 CEACAM18A8MTB9 384 aa8.8□□□□□ -1
CALD1-210ENST00000443197 FOXI3A8MTJ6 420 aaPredicted RBP8.8□□□□□ -1
CALD1-210ENST00000443197 H3BQ15 152 aa8.8□□□□□ -1
CALD1-210ENST00000443197 CT45A6P0DMU7 189 aa8.8□□□□□ -1
CALD1-210ENST00000443197 CT45A5P0DMU8 189 aa8.8□□□□□ -1
CALD1-210ENST00000443197 CT45A7P0DMV0 189 aa8.8□□□□□ -1
CALD1-210ENST00000443197 SPRNQ5BIV9 151 aa8.8□□□□□ -1
CALD1-210ENST00000443197 CT45A1Q5HYN5 189 aa8.8□□□□□ -1
CALD1-210ENST00000443197 LRTM2Q8N967 370 aa8.8□□□□□ -1
CALD1-210ENST00000443197 CT45A3Q8NHU0 189 aa8.8□□□□□ -1
CALD1-210ENST00000443197 SPINK4O60575 86 aa8.8□□□□□ -1
CALD1-210ENST00000443197 PSG5Q15238 335 aa8.8□□□□□ -1
CALD1-210ENST00000443197 OR4A47Q6IF82 309 aa8.8□□□□□ -1
CALD1-210ENST00000443197 NEIL1Q96FI4 390 aaPredicted RBP8.8□□□□□ -1
CALD1-210ENST00000443197 MRPL20Q9BYC9 149 aaKnown RBP8.8□□□□□ -1
CALD1-210ENST00000443197 ANAPC10Q9UM13 185 aa8.8□□□□□ -1
CALD1-210ENST00000443197 ZNF835Q9Y2P0 537 aa8.8□□□□□ -1
CALD1-210ENST00000443197 ARFGEF3Q5TH69 2177 aa8.8□□□□□ -1
CALD1-210ENST00000443197 A0A1W2PN81 502 aa8.8□□□□□ -1
CALD1-210ENST00000443197 C11orf94C9JXX5 98 aa8.8□□□□□ -1
CALD1-210ENST00000443197 CEACAM8P31997 349 aaPredicted RBP8.8□□□□□ -1
CALD1-210ENST00000443197 DUTP33316 252 aaKnown RBP8.8□□□□□ -1
CALD1-210ENST00000443197 CEACAM3P40198 252 aa8.8□□□□□ -1
CALD1-210ENST00000443197 DLX1P56177 255 aa8.8□□□□□ -1
CALD1-210ENST00000443197 RHOBP62745 196 aa8.8□□□□□ -1
CALD1-210ENST00000443197 ZNF273Q14593 569 aa8.8□□□□□ -1
CALD1-210ENST00000443197 KCNIP4Q6PIL6 250 aa8.8□□□□□ -1
CALD1-210ENST00000443197 OR9G1Q8NH87 305 aa8.8□□□□□ -1
CALD1-210ENST00000443197 CMTM2Q8TAZ6 248 aa8.8□□□□□ -1
CALD1-210ENST00000443197 NPVFQ9HCQ7 196 aa8.8□□□□□ -1
CALD1-210ENST00000443197 IGHV3OR16-10A0A075B7F0 116 aa8.79□□□□□ -1
CALD1-210ENST00000443197 A1L4Q6 167 aa8.79□□□□□ -1
CALD1-210ENST00000443197 KBTBD11O94819 623 aa8.79□□□□□ -1
CALD1-210ENST00000443197 DLK1P80370 383 aa8.79□□□□□ -1
CALD1-210ENST00000443197 NMSQ5H8A3 153 aa8.79□□□□□ -1
CALD1-210ENST00000443197 SLC35E3Q7Z769 313 aa8.79□□□□□ -1
CALD1-210ENST00000443197 TCTEX1D1Q8N7M0 179 aa8.79□□□□□ -1
CALD1-210ENST00000443197 RAB24Q969Q5 203 aa8.79□□□□□ -1
CALD1-210ENST00000443197 TPPP3Q9BW30 176 aa8.79□□□□□ -1
CALD1-210ENST00000443197 PXMP4Q9Y6I8 212 aa8.79□□□□□ -1
CALD1-210ENST00000443197 NDUFA2O43678 99 aa8.79□□□□□ -1
CALD1-210ENST00000443197 OR10J1P30954 320 aa8.79□□□□□ -1
CALD1-210ENST00000443197 SERF2P84101 59 aa8.79□□□□□ -1
CALD1-210ENST00000443197 TFF3Q07654 80 aa8.79□□□□□ -1
CALD1-210ENST00000443197 TMEM241Q24JQ0 296 aa8.79□□□□□ -1
CALD1-210ENST00000443197 LYPD2Q6UXB3 125 aa8.79□□□□□ -1
CALD1-210ENST00000443197 OR1B1Q8NGR6 318 aa8.79□□□□□ -1
CALD1-210ENST00000443197 DAZAP1Q96EP5 407 aaKnown RBP8.79□□□□□ -1
CALD1-210ENST00000443197 FAM90A26D6RGX4 464 aa8.79□□□□□ -1
CALD1-210ENST00000443197 PPP5D1E7EU14 171 aa8.79□□□□□ -1
CALD1-210ENST00000443197 YPEL1O60688 119 aa8.79□□□□□ -1
CALD1-210ENST00000443197 CEACAM4O75871 244 aa8.79□□□□□ -1
CALD1-210ENST00000443197 IGLV1-44P01699 117 aa8.79□□□□□ -1
CALD1-210ENST00000443197 ACAA1P09110 424 aaPredicted RBP8.79□□□□□ -1
CALD1-210ENST00000443197 OR10J4P0C629 311 aa8.79□□□□□ -1
CALD1-210ENST00000443197 OR9G9P0C7N8 305 aa8.79□□□□□ -1
CALD1-210ENST00000443197 SPP1P10451 314 aa8.79□□□□□ -1
CALD1-210ENST00000443197 ERVK11-1P61568 191 aa8.79□□□□□ -1
CALD1-210ENST00000443197 YPEL2Q96QA6 119 aa8.79□□□□□ -1
CALD1-210ENST00000443197 GINS3Q9BRX5 216 aa8.79□□□□□ -1
CALD1-210ENST00000443197 A8MXK9 166 aa8.78□□□□□ -1
CALD1-210ENST00000443197 F6UZH7 168 aa8.78□□□□□ -1
CALD1-210ENST00000443197 HSPB1P04792 205 aaKnown RBP8.78□□□□□ -1
CALD1-210ENST00000443197 GRNP28799 593 aaKnown RBP8.78□□□□□ -1
CALD1-210ENST00000443197 RPL11P62913 178 aaKnown RBP8.78□□□□□ -1
CALD1-210ENST00000443197 LDLRAD3Q86YD5 345 aa8.78□□□□□ -1
CALD1-210ENST00000443197 METTL1Q9UBP6 276 aaKnown RBP8.78□□□□□ -1
CALD1-210ENST00000443197 VAX2Q9UIW0 290 aa8.78□□□□□ -1
CALD1-210ENST00000443197 WASHC3Q9Y3C0 194 aa8.78□□□□□ -1
CALD1-210ENST00000443197 AMMECR1Q9Y4X0 333 aaPredicted RBP8.78□□□□□ -1
CALD1-210ENST00000443197 CTXND1A0A1B0GTU2 59 aa8.78□□□□□ -1
CALD1-210ENST00000443197 E7EQL1 145 aa8.78□□□□□ -1
CALD1-210ENST00000443197 MYOD1P15172 320 aa8.78□□□□□ -1
CALD1-210ENST00000443197 UNQ6494/PRO21346Q6UXR6 183 aa8.78□□□□□ -1
CALD1-210ENST00000443197 TMUB1Q9BVT8 246 aa8.78□□□□□ -1
CALD1-210ENST00000443197 WDR61Q9GZS3 305 aaKnown RBP8.78□□□□□ -1
CALD1-210ENST00000443197 LINC00312Q9Y6C7 94 aa8.78□□□□□ -1
CALD1-210ENST00000443197 TNRC6AQ8NDV7 1962 aaKnown RBP8.78□□□□□ -1
CALD1-210ENST00000443197 ZFYVE26Q68DK2 2539 aa8.78□□□□□ -1
CALD1-210ENST00000443197 TRAV3A0A0B4J244 114 aa8.78□□□□□ -1
CALD1-210ENST00000443197 CA2P00918 260 aa8.78□□□□□ -1
CALD1-210ENST00000443197 BPIFB3P59826 476 aa8.78□□□□□ -1
CALD1-210ENST00000443197 LYZP61626 148 aa8.78□□□□□ -1
CALD1-210ENST00000443197 UBE2G1P62253 170 aa8.78□□□□□ -1
CALD1-210ENST00000443197 CCL20P78556 96 aa8.78□□□□□ -1
CALD1-210ENST00000443197 KRTAP27-1Q3LI81 207 aa8.78□□□□□ -1
CALD1-210ENST00000443197 TIGITQ495A1 244 aa8.78□□□□□ -1
CALD1-210ENST00000443197 ZNF880Q6PDB4 577 aa8.78□□□□□ -1
CALD1-210ENST00000443197 OR4C13Q8NGP0 309 aa8.78□□□□□ -1
CALD1-210ENST00000443197 ZNF596Q8TC21 504 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms