RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 CXorf58Q96LI9 332 aa10.42□□□□□ -0.74
PTPRE-203ENST00000442830 FYTTD1Q96QD9 318 aaKnown RBP10.42□□□□□ -0.74
PTPRE-203ENST00000442830 SLC2A9Q9NRM0 540 aa10.42□□□□□ -0.74
PTPRE-203ENST00000442830 FBXL7Q9UJT9 491 aa10.42□□□□□ -0.74
PTPRE-203ENST00000442830 TRBV7-1A0A0A6YYK4 115 aa10.41□□□□□ -0.74
PTPRE-203ENST00000442830 MRPS14O60783 128 aaKnown RBP10.41□□□□□ -0.74
PTPRE-203ENST00000442830 RBMXL2O75526 392 aaKnown RBP10.41□□□□□ -0.74
PTPRE-203ENST00000442830 PRH1P02810 166 aa10.41□□□□□ -0.74
PTPRE-203ENST00000442830 CRYGCP07315 174 aa10.41□□□□□ -0.74
PTPRE-203ENST00000442830 FGF2P09038 288 aa10.41□□□□□ -0.74
PTPRE-203ENST00000442830 ZNF735P0CB33 412 aa10.41□□□□□ -0.74
PTPRE-203ENST00000442830 ARL3P36405 182 aa10.41□□□□□ -0.74
PTPRE-203ENST00000442830 PLA2G7Q13093 441 aa10.41□□□□□ -0.74
PTPRE-203ENST00000442830 KLK9Q2XQG4 91 aa10.41□□□□□ -0.74
PTPRE-203ENST00000442830 ZNF57Q68EA5 555 aaPredicted RBP10.41□□□□□ -0.74
PTPRE-203ENST00000442830 PUSL1Q8N0Z8 303 aaKnown RBP10.41□□□□□ -0.74
PTPRE-203ENST00000442830 TCTEX1D2Q8WW35 142 aa10.41□□□□□ -0.74
PTPRE-203ENST00000442830 SRSF8Q9BRL6 282 aaKnown RBP10.41□□□□□ -0.74
PTPRE-203ENST00000442830 ST6GALNAC5Q9BVH7 336 aa10.41□□□□□ -0.74
PTPRE-203ENST00000442830 KLK9Q9UKQ9 250 aa10.41□□□□□ -0.74
PTPRE-203ENST00000442830 TRAV25A0A0B4J276 109 aa10.4□□□□□ -0.74
PTPRE-203ENST00000442830 RBMY1BA6NDE4 496 aaKnown RBP10.4□□□□□ -0.74
PTPRE-203ENST00000442830 RBMY1EA6NEQ0 496 aaKnown RBP10.4□□□□□ -0.74
PTPRE-203ENST00000442830 NOTOA8MTQ0 251 aa10.4□□□□□ -0.74
PTPRE-203ENST00000442830 TEX22C9J3V5 150 aa10.4□□□□□ -0.74
PTPRE-203ENST00000442830 CD7P09564 240 aa10.4□□□□□ -0.74
PTPRE-203ENST00000442830 RBMY1DP0C7P1 496 aaKnown RBP10.4□□□□□ -0.74
PTPRE-203ENST00000442830 CBLN1P23435 193 aa10.4□□□□□ -0.74
PTPRE-203ENST00000442830 OR10A3P58181 314 aa10.4□□□□□ -0.74
PTPRE-203ENST00000442830 GNG2P59768 71 aa10.4□□□□□ -0.74
PTPRE-203ENST00000442830 ARPC4P59998 168 aa10.4□□□□□ -0.74
PTPRE-203ENST00000442830 RPL8P62917 257 aaKnown RBP10.4□□□□□ -0.74
PTPRE-203ENST00000442830 CDNFQ49AH0 187 aa10.4□□□□□ -0.74
PTPRE-203ENST00000442830 THOC7Q6I9Y2 204 aaKnown RBP10.4□□□□□ -0.74
PTPRE-203ENST00000442830 TPRA1Q86W33 373 aa10.4□□□□□ -0.74
PTPRE-203ENST00000442830 DEFB125Q8N687 156 aa10.4□□□□□ -0.74
PTPRE-203ENST00000442830 ZBTB34Q8NCN2 500 aa10.4□□□□□ -0.74
PTPRE-203ENST00000442830 GAR1Q9NY12 217 aaKnown RBP10.4□□□□□ -0.74
PTPRE-203ENST00000442830 THYN1Q9P016 225 aa10.4□□□□□ -0.74
PTPRE-203ENST00000442830 PPP5D1E7EU14 171 aa10.39□□□□□ -0.75
PTPRE-203ENST00000442830 DEFA4P12838 97 aa10.39□□□□□ -0.75
PTPRE-203ENST00000442830 NFYAP23511 347 aaPredicted RBP10.39□□□□□ -0.75
PTPRE-203ENST00000442830 PSMB6P28072 239 aa10.39□□□□□ -0.75
PTPRE-203ENST00000442830 ELLP55199 621 aaPredicted RBP10.39□□□□□ -0.75
PTPRE-203ENST00000442830 SCAND1P57086 179 aa10.39□□□□□ -0.75
PTPRE-203ENST00000442830 C10orf55Q5SWW7 151 aa10.39□□□□□ -0.75
PTPRE-203ENST00000442830 OR52B4Q8NGK2 314 aa10.39□□□□□ -0.75
PTPRE-203ENST00000442830 BORCS5Q969J3 196 aa10.39□□□□□ -0.75
PTPRE-203ENST00000442830 GGTLC1Q9BX51 225 aa10.39□□□□□ -0.75
PTPRE-203ENST00000442830 RETNQ9HD89 108 aa10.39□□□□□ -0.75
PTPRE-203ENST00000442830 BET1LQ9NYM9 111 aa10.39□□□□□ -0.75
PTPRE-203ENST00000442830 ANXA10Q9UJ72 324 aa10.39□□□□□ -0.75
PTPRE-203ENST00000442830 IGKV1D-8A0A087WSZ0 117 aa10.38□□□□□ -0.75
PTPRE-203ENST00000442830 LOC102724200A0A096LPH7 203 aaPredicted RBP10.38□□□□□ -0.75
PTPRE-203ENST00000442830 RBFOX2O43251 390 aaKnown RBP eCLIP10.38□□□□□ -0.75
PTPRE-203ENST00000442830 NDUFB8O95169 186 aa10.38□□□□□ -0.75
PTPRE-203ENST00000442830 OR2C1O95371 312 aa10.38□□□□□ -0.75
PTPRE-203ENST00000442830 MYOD1P15172 320 aa10.38□□□□□ -0.75
PTPRE-203ENST00000442830 CTRB1P17538 263 aa10.38□□□□□ -0.75
PTPRE-203ENST00000442830 HLA-GP17693 338 aa10.38□□□□□ -0.75
PTPRE-203ENST00000442830 FGF9P31371 208 aaPredicted RBP10.38□□□□□ -0.75
PTPRE-203ENST00000442830 GABARAPL2P60520 117 aa10.38□□□□□ -0.75
PTPRE-203ENST00000442830 CATR1Q13166 79 aa10.38□□□□□ -0.75
PTPRE-203ENST00000442830 OR2B11Q5JQS5 317 aa10.38□□□□□ -0.75
PTPRE-203ENST00000442830 CTRB2Q6GPI1 263 aa10.38□□□□□ -0.75
PTPRE-203ENST00000442830 MFSD4AQ8N468 514 aa10.38□□□□□ -0.75
PTPRE-203ENST00000442830 WDR89Q96FK6 387 aaPredicted RBP10.38□□□□□ -0.75
PTPRE-203ENST00000442830 FAM110AQ9BQ89 295 aa10.38□□□□□ -0.75
PTPRE-203ENST00000442830 UFC1Q9Y3C8 167 aa10.38□□□□□ -0.75
PTPRE-203ENST00000442830 DMRT1Q9Y5R6 373 aa10.38□□□□□ -0.75
PTPRE-203ENST00000442830 A0A0A6YYH2 397 aa10.37□□□□□ -0.75
PTPRE-203ENST00000442830 ZNF320A2RRD8 509 aa10.37□□□□□ -0.75
PTPRE-203ENST00000442830 HMX3A6NHT5 357 aa10.37□□□□□ -0.75
PTPRE-203ENST00000442830 A6NJ64 397 aa10.37□□□□□ -0.75
PTPRE-203ENST00000442830 IGLV2-14P01704 120 aa10.37□□□□□ -0.75
PTPRE-203ENST00000442830 IL6RP08887 468 aaPredicted RBP10.37□□□□□ -0.75
PTPRE-203ENST00000442830 RPL30P62888 115 aaKnown RBP10.37□□□□□ -0.75
PTPRE-203ENST00000442830 EIF4EBP1Q13541 118 aaPredicted RBP10.37□□□□□ -0.75
PTPRE-203ENST00000442830 C22orf42Q6IC83 251 aa10.37□□□□□ -0.75
PTPRE-203ENST00000442830 CLEC19AQ6UXS0 136 aa10.37□□□□□ -0.75
PTPRE-203ENST00000442830 RBPMS2Q6ZRY4 209 aaKnown RBP10.37□□□□□ -0.75
PTPRE-203ENST00000442830 HSD17B13Q7Z5P4 300 aaPredicted RBP10.37□□□□□ -0.75
PTPRE-203ENST00000442830 SLC38A6Q8IZM9 456 aa10.37□□□□□ -0.75
PTPRE-203ENST00000442830 TMEM61Q8N0U2 210 aa10.37□□□□□ -0.75
PTPRE-203ENST00000442830 CD300LFQ8TDQ1 290 aa10.37□□□□□ -0.75
PTPRE-203ENST00000442830 FCGR1BQ92637 280 aa10.37□□□□□ -0.75
PTPRE-203ENST00000442830 CCDC140Q96MF4 163 aa10.37□□□□□ -0.75
PTPRE-203ENST00000442830 FANCD2OSQ96PS1 177 aa10.37□□□□□ -0.75
PTPRE-203ENST00000442830 ATP6V0BQ99437 205 aa10.37□□□□□ -0.75
PTPRE-203ENST00000442830 MRPL27Q9P0M9 148 aaKnown RBP10.37□□□□□ -0.75
PTPRE-203ENST00000442830 SPATA2Q9UM82 520 aa10.37□□□□□ -0.75
PTPRE-203ENST00000442830 TP53TG1Q9Y2A0 90 aa10.37□□□□□ -0.75
PTPRE-203ENST00000442830 IGKV1D-13A0A0B4J2D9 117 aa10.36□□□□□ -0.75
PTPRE-203ENST00000442830 TMEM213A2RRL7 107 aa10.36□□□□□ -0.75
PTPRE-203ENST00000442830 TMEM235A6NFC5 223 aa10.36□□□□□ -0.75
PTPRE-203ENST00000442830 J3QRK9 145 aa10.36□□□□□ -0.75
PTPRE-203ENST00000442830 UBE2CO00762 179 aa10.36□□□□□ -0.75
PTPRE-203ENST00000442830 TMEM127O75204 238 aa10.36□□□□□ -0.75
PTPRE-203ENST00000442830 IGKV1-13P0DP09 117 aa10.36□□□□□ -0.75
PTPRE-203ENST00000442830 APOC4P55056 127 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms