RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 ZNF766Q5HY98 468 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 ABHD17BQ5VST6 288 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 C9orf40Q8IXQ3 194 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 C20orf196Q8IYI0 205 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 OR8B3Q8NGG8 313 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 MBD3L1Q8WWY6 194 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 PIGTQ969N2 578 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 ZG16BQ96DA0 208 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 RAB40CQ96S21 281 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 SPIN2AQ99865 258 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 SPIN2BQ9BPZ2 258 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 WFDC6Q9BQY6 131 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 PNRC2Q9NPJ4 139 aaKnown RBP2.37□□□□□ -2.03
LIG4-203ENST00000442234 ZNF581Q9P0T4 197 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 TAAR3PQ9P1P4 343 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 FBLN5Q9UBX5 448 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 ERG28Q9UKR5 140 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 RARRES3Q9UL19 164 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 PXMP4Q9Y6I8 212 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 ADAMTS9Q9P2N4 1935 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 FREM3P0C091 2139 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 DOCK10Q96BY6 2186 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 KMT2BQ9UMN6 2715 aaPredicted RBP2.37□□□□□ -2.03
LIG4-203ENST00000442234 TMEM189A5PLL7 270 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 TMEM150CB9EJG8 249 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 H3BMH7 237 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 M0QZQ0 153 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 SSSCA1O60232 199 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 ZNF324O75467 553 aaPredicted RBP2.37□□□□□ -2.03
LIG4-203ENST00000442234 GPR75O95800 540 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 IGHV4-34P06331 123 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 LYL1P12980 280 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 G6PCP35575 357 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 CTRLP40313 264 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 TCTAP57738 103 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 RPS21P63220 83 aaKnown RBP2.37□□□□□ -2.03
LIG4-203ENST00000442234 ACVR1Q04771 509 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 CATR1Q13166 79 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 LRRC75BQ2VPJ9 315 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 SP6Q3SY56 376 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 TMEM97Q5BJF2 176 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 MS4A13Q5J8X5 152 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 VAX1Q5SQQ9 334 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 PEAR1Q5VY43 1037 aaPredicted RBP2.37□□□□□ -2.03
LIG4-203ENST00000442234 ZNF324BQ6AW86 544 aaPredicted RBP2.37□□□□□ -2.03
LIG4-203ENST00000442234 SPSB3Q6PJ21 355 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 STPG3Q8N7X2 389 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 OR2M3Q8NG83 312 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 RNF128Q8TEB7 428 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 SAP25Q8TEE9 199 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 DIO2Q92813 273 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 PTH2Q96A98 100 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 NEURL3Q96EH8 262 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 KCNS1Q96KK3 526 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 GPR82Q96P67 336 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 OR4C12Q96R67 309 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 GFI1Q99684 422 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 PYGO2Q9BRQ0 406 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 DUSP23Q9BVJ7 150 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 SCRT1Q9BWW7 348 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 DEFB127Q9H1M4 99 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 MAGEH1Q9H213 219 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 C5orf66Q9H5L9 145 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 FAM206AQ9NX38 181 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 DNAJB12Q9NXW2 375 aaKnown RBP2.37□□□□□ -2.03
LIG4-203ENST00000442234 ONECUT1Q9UBC0 465 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 ANXA10Q9UJ72 324 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 CSMD2Q7Z408 3487 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 TRAV38-1A0A0B4J264 116 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 A0A1B0GTH9 108 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 LOC101059948A0A1B0GTJ6 334 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 A0A1W2PQM1 296 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 C9orf118A6NHY6 69 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 H3BP45 60 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 F2RL2O00254 374 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 CDC42EP2O14613 210 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 TNFRSF6BO95407 300 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 ISG15P05161 165 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 NGFRP08138 427 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 CT45A10P0DMU9 189 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 HLA-DOBP13765 273 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 GDF1P27539 372 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 SRIP30626 198 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 PTGER1P34995 402 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 GLRXP35754 106 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 KIR2DS4P43632 304 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 NCBP2P52298 156 aaKnown RBP eCLIP2.37□□□□□ -2.03
LIG4-203ENST00000442234 NXPH1P58417 271 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 TAS2R46P59540 309 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 RPS15AP62244 130 aaKnown RBP2.37□□□□□ -2.03
LIG4-203ENST00000442234 RPS11P62280 158 aaKnown RBP eCLIP2.37□□□□□ -2.03
LIG4-203ENST00000442234 GRB2P62993 217 aaKnown RBP2.37□□□□□ -2.03
LIG4-203ENST00000442234 C22orf39Q6P5X5 142 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 ADAMTSL4Q6UY14 1074 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 C8orf86Q6ZUL3 223 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 MRGPREQ86SM8 312 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 HOGA1Q86XE5 327 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 LINC01465Q8N7H1 131 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 SYT8Q8NBV8 401 aa2.37□□□□□ -2.03
LIG4-203ENST00000442234 OR13C6PQ8NH95 151 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms