RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 KLHDC1Q8N7A1 406 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 OR10A7Q8NGE5 316 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 OR52M1Q8NGK5 317 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 OR8U1Q8NH10 309 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 OR2T6Q8NHC8 308 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 ZNF596Q8TC21 504 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 SECTM1Q8WVN6 248 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 TNFRSF14Q92956 283 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 ABHD14BQ96IU4 210 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 ZNF251Q9BRH9 671 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 SIRPDQ9H106 197 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 ALX4Q9H161 411 aaPredicted RBP3.79□□□□□ -1.8
PTPN4-206ENST00000441089 OR2D2Q9H210 308 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 GHITMQ9H3K2 345 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 GAL3ST2Q9H3Q3 398 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 TMEM140Q9NV12 185 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 GNG12Q9UBI6 72 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 VPREB3Q9UKI3 123 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 RNF150Q9ULK6 438 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 PSG11Q9UQ72 335 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 COX11Q9Y6N1 276 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 SESN1Q9Y6P5 492 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 IGHV2-26A0A0B4J1V2 119 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 C9orf170A2RU37 121 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 CRYM-AS1A6NIL9 109 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 LINC00473A8K010 186 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 M0R1W7 72 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 GPR31O00270 319 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 ITGB1BP1O14713 200 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 TNFSF12O43508 249 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 ENSAO43768 121 aaKnown RBP3.78□□□□□ -1.8
PTPN4-206ENST00000441089 SLC25A17O43808 307 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 PGLYRP1O75594 196 aaPredicted RBP3.78□□□□□ -1.8
PTPN4-206ENST00000441089 SFT2D2O95562 160 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 RBP4P02753 201 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 OR5AC1P0C628 307 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 OR4E1P0C645 316 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 PF4V1P10720 104 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 AKR1C4P17516 323 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 GCSHP23434 173 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 COX7A1P24310 79 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 PIGPP57054 158 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 BRWD1-AS2P59051 145 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 RND3P61587 244 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 RPL30P62888 115 aaKnown RBP3.78□□□□□ -1.8
PTPN4-206ENST00000441089 CD300CQ08708 224 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 DHRS2Q13268 280 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 DIAPH2-AS1Q14236 149 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 ANKRD55Q3KP44 614 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 TMEM30BQ3MIR4 351 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 SP6Q3SY56 376 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 Q3ZCU0 254 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 RPL39P5Q59GN2 51 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 ZNF626Q68DY1 528 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 LIN54Q6MZP7 749 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 SLC25A48Q6ZT89 311 aaKnown RBP3.78□□□□□ -1.8
PTPN4-206ENST00000441089 LYG2Q86SG7 212 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 TBC1D26Q86UD7 250 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 SLC38A6Q8IZM9 456 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 LYG1Q8N1E2 194 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 ABHD12Q8N2K0 398 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 PNKDQ8N490 385 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 DRAM1Q8N682 238 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 ZNF645Q8N7E2 425 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 OR4C13Q8NGP0 309 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 LHFPL5Q8TAF8 219 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 ZFAND1Q8TCF1 268 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 ZNF431Q8TF32 576 aaPredicted RBP3.78□□□□□ -1.8
PTPN4-206ENST00000441089 RTN4IP1Q8WWV3 396 aaPredicted RBP3.78□□□□□ -1.8
PTPN4-206ENST00000441089 TP53RKQ96S44 253 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 ABHD14AQ9BUJ0 271 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 TMEM133Q9H2Q1 129 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 OR51J1Q9H342 316 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 NAA60Q9H7X0 242 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 SIRT7Q9NRC8 400 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 SLC2A9Q9NRM0 540 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 SDHAF2Q9NX18 166 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 ONECUT1Q9UBC0 465 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 GAB2Q9UQC2 676 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 HERC1Q15751 4861 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 TNCP24821 2201 aa3.78□□□□□ -1.8
PTPN4-206ENST00000441089 ABCA13Q86UQ4 5058 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 SAA2-SAA4A0A096LPE2 208 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 A0A1W2PRD5 423 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 A0A1W2PRF3 423 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 A0A1W2PRM7 423 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 SNRPGP15A8MWD9 76 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 ODF3BA8MYP8 253 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 LY6LH3BQJ8 138 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 J3QR06 171 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 M0R1X1 148 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 MPPED1O15442 326 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 PRAF2O60831 178 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 RGS11O94810 467 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 DHFRP00374 187 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 IGKV1-39P01597 117 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 IGLV1-47P01700 117 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 HLA-AP01891 365 aaKnown RBP3.77□□□□□ -1.81
PTPN4-206ENST00000441089 IGKV1D-39P04432 117 aa3.77□□□□□ -1.81
PTPN4-206ENST00000441089 FBP1P09467 338 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms