RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 ADH4P08319 380 aa11.21□□□□□ -0.62
HERPUD1-204ENST00000439977 TMEM170AQ8WVE7 144 aa11.21□□□□□ -0.62
HERPUD1-204ENST00000439977 S1PR3Q99500 378 aa11.21□□□□□ -0.62
HERPUD1-204ENST00000439977 TMEM140Q9NV12 185 aa11.21□□□□□ -0.62
HERPUD1-204ENST00000439977 PROCRQ9UNN8 238 aa11.21□□□□□ -0.62
HERPUD1-204ENST00000439977 PIEZO2Q9H5I5 2752 aa11.21□□□□□ -0.62
HERPUD1-204ENST00000439977 HPRT1P00492 218 aa11.2□□□□□ -0.62
HERPUD1-204ENST00000439977 GNG10P50151 68 aa11.2□□□□□ -0.62
HERPUD1-204ENST00000439977 VWC2Q2TAL6 325 aa11.2□□□□□ -0.62
HERPUD1-204ENST00000439977 TMEM183AQ8IXX5 376 aa11.2□□□□□ -0.62
HERPUD1-204ENST00000439977 OR1P1Q8NH06 330 aa11.2□□□□□ -0.62
HERPUD1-204ENST00000439977 SARAFQ96BY9 339 aa11.2□□□□□ -0.62
HERPUD1-204ENST00000439977 MGST2Q99735 147 aa11.2□□□□□ -0.62
HERPUD1-204ENST00000439977 PRR33A8MZF0 331 aa11.2□□□□□ -0.62
HERPUD1-204ENST00000439977 THBS3P49746 956 aa11.2□□□□□ -0.62
HERPUD1-204ENST00000439977 LOXL3P58215 753 aa11.2□□□□□ -0.62
HERPUD1-204ENST00000439977 SPATA31B1PQ5VZV4 182 aa11.2□□□□□ -0.62
HERPUD1-204ENST00000439977 BHLHA15Q7RTS1 189 aaPredicted RBP11.2□□□□□ -0.62
HERPUD1-204ENST00000439977 LINC01551Q86U37 167 aa11.2□□□□□ -0.62
HERPUD1-204ENST00000439977 TGIF2LYQ8IUE0 185 aa11.2□□□□□ -0.62
HERPUD1-204ENST00000439977 SNRNP40Q96DI7 357 aaKnown RBP11.2□□□□□ -0.62
HERPUD1-204ENST00000439977 IFI27L2Q9H2X8 130 aa11.2□□□□□ -0.62
HERPUD1-204ENST00000439977 PXMP4Q9Y6I8 212 aa11.2□□□□□ -0.62
HERPUD1-204ENST00000439977 OTOGLQ3ZCN5 2332 aa11.19□□□□□ -0.62
HERPUD1-204ENST00000439977 TRBV20OR9-2A0A075B6H5 130 aa11.19□□□□□ -0.62
HERPUD1-204ENST00000439977 GFRA3O60609 400 aa11.19□□□□□ -0.62
HERPUD1-204ENST00000439977 ERVK-16P61578 105 aa11.19□□□□□ -0.62
HERPUD1-204ENST00000439977 HTD2P86397 168 aa11.19□□□□□ -0.62
HERPUD1-204ENST00000439977 SEM1Q6ZVN7 128 aa11.19□□□□□ -0.62
HERPUD1-204ENST00000439977 SEPSECSQ9HD40 501 aaKnown RBP11.19□□□□□ -0.62
HERPUD1-204ENST00000439977 PLSCR4Q9NRQ2 329 aa11.19□□□□□ -0.62
HERPUD1-204ENST00000439977 SCO2A0A1W2PP80 73 aa11.19□□□□□ -0.62
HERPUD1-204ENST00000439977 ZNF320A2RRD8 509 aa11.19□□□□□ -0.62
HERPUD1-204ENST00000439977 SRRM5B3KS81 715 aa11.19□□□□□ -0.62
HERPUD1-204ENST00000439977 RBFOX2O43251 390 aaKnown RBP eCLIP11.19□□□□□ -0.621e-7■■■■■ 34.3
HERPUD1-204ENST00000439977 IGLV1-44P01699 117 aa11.19□□□□□ -0.62
HERPUD1-204ENST00000439977 NUBP1P53384 320 aa11.19□□□□□ -0.62
HERPUD1-204ENST00000439977 PMS2P11Q13670 270 aa11.19□□□□□ -0.62
HERPUD1-204ENST00000439977 TCF23Q7RTU1 214 aa11.19□□□□□ -0.62
HERPUD1-204ENST00000439977 ITLN1Q8WWA0 313 aa11.19□□□□□ -0.62
HERPUD1-204ENST00000439977 PYGO2Q9BRQ0 406 aa11.19□□□□□ -0.62
HERPUD1-204ENST00000439977 TRAV17A0A0B4J275 112 aa11.19□□□□□ -0.62
HERPUD1-204ENST00000439977 FOXH1O75593 365 aa11.19□□□□□ -0.62
HERPUD1-204ENST00000439977 ACTL6BO94805 426 aa11.19□□□□□ -0.62
HERPUD1-204ENST00000439977 SPCS3P61009 180 aa11.19□□□□□ -0.62
HERPUD1-204ENST00000439977 RELBQ01201 579 aa11.19□□□□□ -0.62
HERPUD1-204ENST00000439977 LINC00469Q8N7U9 141 aa11.19□□□□□ -0.62
HERPUD1-204ENST00000439977 C14orf144Q96I85 54 aa11.19□□□□□ -0.62
HERPUD1-204ENST00000439977 AKAP13Q12802 2813 aa11.18□□□□□ -0.62
HERPUD1-204ENST00000439977 HCFC1P51610 2035 aa11.18□□□□□ -0.62
HERPUD1-204ENST00000439977 TNCP24821 2201 aa11.18□□□□□ -0.62
HERPUD1-204ENST00000439977 ARFGEF3Q5TH69 2177 aa11.18□□□□□ -0.62
HERPUD1-204ENST00000439977 GZMBP10144 247 aa11.18□□□□□ -0.62
HERPUD1-204ENST00000439977 MBNL2Q5VZF2 373 aaKnown RBP11.18□□□□□ -0.62
HERPUD1-204ENST00000439977 C22orf34Q6ZV56 151 aa11.18□□□□□ -0.62
HERPUD1-204ENST00000439977 MOB3BQ86TA1 216 aa11.18□□□□□ -0.62
HERPUD1-204ENST00000439977 FAM90A1Q86YD7 464 aa11.18□□□□□ -0.62
HERPUD1-204ENST00000439977 LYG1Q8N1E2 194 aa11.18□□□□□ -0.62
HERPUD1-204ENST00000439977 GGTLC1Q9BX51 225 aa11.18□□□□□ -0.62
HERPUD1-204ENST00000439977 DCAF16Q9NXF7 216 aa11.18□□□□□ -0.62
HERPUD1-204ENST00000439977 CALYQ9NYX4 217 aa11.18□□□□□ -0.62
HERPUD1-204ENST00000439977 TCF19Q9Y242 345 aa11.18□□□□□ -0.62
HERPUD1-204ENST00000439977 MGST3O14880 152 aa11.18□□□□□ -0.62
HERPUD1-204ENST00000439977 IL3RAP26951 378 aa11.18□□□□□ -0.62
HERPUD1-204ENST00000439977 VDAC2P45880 294 aaPredicted RBP11.18□□□□□ -0.62
HERPUD1-204ENST00000439977 CT45A1Q5HYN5 189 aa11.18□□□□□ -0.62
HERPUD1-204ENST00000439977 CT45A3Q8NHU0 189 aa11.18□□□□□ -0.62
HERPUD1-204ENST00000439977 LOXL4Q96JB6 756 aa11.18□□□□□ -0.62
HERPUD1-204ENST00000439977 SLC25A15Q9Y619 301 aa11.18□□□□□ -0.62
HERPUD1-204ENST00000439977 TGOLN2O43493 480 aa11.17□□□□□ -0.62
HERPUD1-204ENST00000439977 C1orf159Q96HA4 380 aa11.17□□□□□ -0.62
HERPUD1-204ENST00000439977 RELNP78509 3460 aa11.17□□□□□ -0.62
HERPUD1-204ENST00000439977 ZFHX2Q9C0A1 2572 aaPredicted RBP11.17□□□□□ -0.62
HERPUD1-204ENST00000439977 A0A087X0M5 115 aa11.17□□□□□ -0.62
HERPUD1-204ENST00000439977 SAA2-SAA4A0A096LPE2 208 aa11.17□□□□□ -0.62
HERPUD1-204ENST00000439977 A0A1B0GX30 115 aa11.17□□□□□ -0.62
HERPUD1-204ENST00000439977 FTH1P19P0C7X4 201 aa11.17□□□□□ -0.62
HERPUD1-204ENST00000439977 SAA2P0DJI9 122 aaPredicted RBP11.17□□□□□ -0.62
HERPUD1-204ENST00000439977 ARSJQ5FYB0 599 aaPredicted RBP11.17□□□□□ -0.62
HERPUD1-204ENST00000439977 TCTEX1D1Q8N7M0 179 aa11.17□□□□□ -0.62
HERPUD1-204ENST00000439977 SGMS2Q8NHU3 365 aa11.17□□□□□ -0.62
HERPUD1-204ENST00000439977 ANAPC16Q96DE5 110 aa11.17□□□□□ -0.62
HERPUD1-204ENST00000439977 JPT1Q9UK76 154 aa11.17□□□□□ -0.62
HERPUD1-204ENST00000439977 YTHDF2Q9Y5A9 579 aaKnown RBP11.17□□□□□ -0.62
HERPUD1-204ENST00000439977 MMP23AO75900 390 aa11.16□□□□□ -0.62
HERPUD1-204ENST00000439977 CGAP01215 116 aa11.16□□□□□ -0.62
HERPUD1-204ENST00000439977 GATA2P23769 480 aaPredicted RBP11.16□□□□□ -0.62
HERPUD1-204ENST00000439977 ZNF474Q6S9Z5 364 aaPredicted RBP11.16□□□□□ -0.62
HERPUD1-204ENST00000439977 LURAP1LQ8IV03 231 aa11.16□□□□□ -0.62
HERPUD1-204ENST00000439977 ZCCHC24Q8N2G6 241 aaKnown RBP11.16□□□□□ -0.62
HERPUD1-204ENST00000439977 C1orf162Q8NEQ5 155 aaPredicted RBP11.16□□□□□ -0.62
HERPUD1-204ENST00000439977 PCNX1Q96RV3 2341 aa11.16□□□□□ -0.62
HERPUD1-204ENST00000439977 PKDREJQ9NTG1 2253 aa11.16□□□□□ -0.62
HERPUD1-204ENST00000439977 ZNF891A8MT65 544 aaPredicted RBP11.16□□□□□ -0.62
HERPUD1-204ENST00000439977 YPEL1O60688 119 aa11.16□□□□□ -0.62
HERPUD1-204ENST00000439977 DDTP30046 118 aa11.16□□□□□ -0.62
HERPUD1-204ENST00000439977 YPEL2Q96QA6 119 aa11.16□□□□□ -0.62
HERPUD1-204ENST00000439977 AHRRA9YTQ3 701 aa11.15□□□□□ -0.62
HERPUD1-204ENST00000439977 SLC17A3O00476 420 aa11.15□□□□□ -0.62
HERPUD1-204ENST00000439977 CD33P20138 364 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms