RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 BTN1A1Q13410 526 aa9.6□□□□□ -0.87
SMAD3-202ENST00000439724 TMEM177Q53S58 311 aa9.6□□□□□ -0.87
SMAD3-202ENST00000439724 TMEM41BQ5BJD5 291 aa9.6□□□□□ -0.87
SMAD3-202ENST00000439724 OR10X1Q8NGY0 326 aa9.6□□□□□ -0.87
SMAD3-202ENST00000439724 TNFRSF14Q92956 283 aa9.6□□□□□ -0.87
SMAD3-202ENST00000439724 TMEM133Q9H2Q1 129 aa9.6□□□□□ -0.87
SMAD3-202ENST00000439724 HEYLQ9NQ87 328 aaPredicted RBP9.6□□□□□ -0.87
SMAD3-202ENST00000439724 RPRMQ9NS64 109 aa9.6□□□□□ -0.87
SMAD3-202ENST00000439724 MIOXQ9UGB7 285 aa9.6□□□□□ -0.87
SMAD3-202ENST00000439724 ZNF257Q9Y2Q1 563 aa9.6□□□□□ -0.87
SMAD3-202ENST00000439724 KPTNQ9Y664 436 aa9.6□□□□□ -0.87
SMAD3-202ENST00000439724 PIEZO1Q92508 2521 aa9.59□□□□□ -0.87
SMAD3-202ENST00000439724 COL6A6A6NMZ7 2263 aa9.59□□□□□ -0.87
SMAD3-202ENST00000439724 A0A1W2PPH5 198 aa9.59□□□□□ -0.87
SMAD3-202ENST00000439724 SNAPINO95295 136 aa9.59□□□□□ -0.87
SMAD3-202ENST00000439724 IFNA10P01566 189 aa9.59□□□□□ -0.87
SMAD3-202ENST00000439724 IGKV1-16P04430 117 aa9.59□□□□□ -0.87
SMAD3-202ENST00000439724 SOD3P08294 240 aa9.59□□□□□ -0.87
SMAD3-202ENST00000439724 FGF7P21781 194 aa9.59□□□□□ -0.87
SMAD3-202ENST00000439724 IL3RAP26951 378 aa9.59□□□□□ -0.87
SMAD3-202ENST00000439724 HOXA1P49639 335 aaPredicted RBP9.59□□□□□ -0.87
SMAD3-202ENST00000439724 AVPI1Q5T686 147 aa9.59□□□□□ -0.87
SMAD3-202ENST00000439724 PDPNQ86YL7 162 aa9.59□□□□□ -0.87
SMAD3-202ENST00000439724 OR8B3Q8NGG8 313 aa9.59□□□□□ -0.87
SMAD3-202ENST00000439724 MBD3L1Q8WWY6 194 aa9.59□□□□□ -0.87
SMAD3-202ENST00000439724 RBMXL1Q96E39 390 aaKnown RBP9.59□□□□□ -0.87
SMAD3-202ENST00000439724 NEIL1Q96FI4 390 aaPredicted RBP9.59□□□□□ -0.87
SMAD3-202ENST00000439724 TIMD4Q96H15 378 aa9.59□□□□□ -0.87
SMAD3-202ENST00000439724 OR8B2Q96RD0 313 aa9.59□□□□□ -0.87
SMAD3-202ENST00000439724 NABP2Q9BQ15 211 aa9.59□□□□□ -0.87
SMAD3-202ENST00000439724 PCGF1Q9BSM1 259 aa9.59□□□□□ -0.87
SMAD3-202ENST00000439724 GGACTQ9BVM4 153 aa9.59□□□□□ -0.87
SMAD3-202ENST00000439724 EIF5A2Q9GZV4 153 aaKnown RBP9.59□□□□□ -0.87
SMAD3-202ENST00000439724 CACNA1AO00555 2505 aa9.58□□□□□ -0.88
SMAD3-202ENST00000439724 PRSS46E5RG02 174 aa9.58□□□□□ -0.88
SMAD3-202ENST00000439724 KBTBD11O94819 623 aa9.58□□□□□ -0.88
SMAD3-202ENST00000439724 PPT1P50897 306 aa9.58□□□□□ -0.88
SMAD3-202ENST00000439724 CCL20P78556 96 aa9.58□□□□□ -0.88
SMAD3-202ENST00000439724 DLK1P80370 383 aa9.58□□□□□ -0.88
SMAD3-202ENST00000439724 ABHD12Q8N2K0 398 aa9.58□□□□□ -0.88
SMAD3-202ENST00000439724 SFT2D1Q8WV19 159 aa9.58□□□□□ -0.88
SMAD3-202ENST00000439724 RAB1CQ92928 201 aa9.58□□□□□ -0.88
SMAD3-202ENST00000439724 FKBP11Q9NYL4 201 aa9.58□□□□□ -0.88
SMAD3-202ENST00000439724 WDR83OSQ9Y284 106 aa9.58□□□□□ -0.88
SMAD3-202ENST00000439724 TMA7Q9Y2S6 64 aaKnown RBP9.58□□□□□ -0.88
SMAD3-202ENST00000439724 A0A1B0GV50 99 aa9.57□□□□□ -0.88
SMAD3-202ENST00000439724 RBFOX3A6NFN3 312 aa9.57□□□□□ -0.88
SMAD3-202ENST00000439724 SRRM4A7MD48 611 aaKnown RBP9.57□□□□□ -0.88
SMAD3-202ENST00000439724 DNASE2O00115 360 aaPredicted RBP9.57□□□□□ -0.88
SMAD3-202ENST00000439724 SAA1P0DJI8 122 aaPredicted RBP9.57□□□□□ -0.88
SMAD3-202ENST00000439724 RPS16P62249 146 aaKnown RBP9.57□□□□□ -0.88
SMAD3-202ENST00000439724 RAB11AP62491 216 aa9.57□□□□□ -0.88
SMAD3-202ENST00000439724 PRCDQ00LT1 54 aa9.57□□□□□ -0.88
SMAD3-202ENST00000439724 ZNF726P1Q15940 193 aa9.57□□□□□ -0.88
SMAD3-202ENST00000439724 WDR25Q64LD2 544 aaPredicted RBP9.57□□□□□ -0.88
SMAD3-202ENST00000439724 ETV3LQ6ZN32 361 aa9.57□□□□□ -0.88
SMAD3-202ENST00000439724 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.57□□□□□ -0.88
SMAD3-202ENST00000439724 OR5B3Q8NH48 314 aa9.57□□□□□ -0.88
SMAD3-202ENST00000439724 TMEM170AQ8WVE7 144 aa9.57□□□□□ -0.88
SMAD3-202ENST00000439724 RCC1LQ96I51 464 aaKnown RBP9.57□□□□□ -0.88
SMAD3-202ENST00000439724 HARBI1Q96MB7 349 aa9.57□□□□□ -0.88
SMAD3-202ENST00000439724 VSIRQ9H7M9 311 aa9.57□□□□□ -0.88
SMAD3-202ENST00000439724 ENY2Q9NPA8 101 aa9.57□□□□□ -0.88
SMAD3-202ENST00000439724 WASHC3Q9Y3C0 194 aa9.57□□□□□ -0.88
SMAD3-202ENST00000439724 OR51B2Q9Y5P1 312 aa9.57□□□□□ -0.88
SMAD3-202ENST00000439724 HIVEP3Q5T1R4 2406 aa9.57□□□□□ -0.88
SMAD3-202ENST00000439724 IGHV2-26A0A0B4J1V2 119 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 PPIAL4CA0A0B4J2A2 164 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 A0A1W2PPR1 153 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 C17orf112F2Z3M2 114 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 H7C2Y5 167 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 RRHO14718 337 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 SOX15O60248 233 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 MBP02144 154 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 PPIAL4GP0DN37 164 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 NPY1RP25929 384 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 CD1BP29016 333 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 MC5RP33032 325 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 REG1BP48304 166 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 RAB13P51153 203 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 ELLP55199 621 aaPredicted RBP9.56□□□□□ -0.88
SMAD3-202ENST00000439724 ZNF506Q5JVG8 444 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 ACSM6Q6P461 480 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 TGIF2LXQ8IUE1 241 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 LY6G5BQ8NDX9 201 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 SLC24A4Q8NFF2 622 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 OR4C13Q8NGP0 309 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 OR4A5Q8NH83 315 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 LHX4Q969G2 390 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 FLYWCH2Q96CP2 140 aaKnown RBP9.56□□□□□ -0.88
SMAD3-202ENST00000439724 NPCDR1Q9BY65 106 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 SLC35B3Q9H1N7 401 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 CHODLQ9H9P2 273 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 MPDU1O75352 247 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 LY6HO94772 140 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 IGLV1-47P01700 117 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 IGFBP2P18065 325 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 USF1P22415 310 aaPredicted RBP9.56□□□□□ -0.88
SMAD3-202ENST00000439724 PRRX1P54821 245 aa9.56□□□□□ -0.88
SMAD3-202ENST00000439724 ATP5IP56385 69 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms