RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 CCL28Q9NRJ3 127 aa14.37□□□□□ -0.11
CCDC78-204ENST00000439619 NPIPB5A8MRT5 1133 aa14.36□□□□□ -0.11
CCDC78-204ENST00000439619 TNFSF12O43508 249 aa14.36□□□□□ -0.11
CCDC78-204ENST00000439619 XRCC3O43542 346 aa14.36□□□□□ -0.11
CCDC78-204ENST00000439619 TRBV12-3P01733 135 aa14.36□□□□□ -0.11
CCDC78-204ENST00000439619 FXYD4P59646 89 aa14.36□□□□□ -0.11
CCDC78-204ENST00000439619 HERV-K104P61576 105 aa14.36□□□□□ -0.11
CCDC78-204ENST00000439619 RPL8P62917 257 aaKnown RBP14.36□□□□□ -0.11
CCDC78-204ENST00000439619 C15orf32Q32M92 178 aa14.36□□□□□ -0.11
CCDC78-204ENST00000439619 SPAG16Q8N0X2 631 aa14.36□□□□□ -0.11
CCDC78-204ENST00000439619 PUSL1Q8N0Z8 303 aaKnown RBP14.36□□□□□ -0.11
CCDC78-204ENST00000439619 OR5AP2Q8NGF4 316 aa14.36□□□□□ -0.11
CCDC78-204ENST00000439619 CD300LFQ8TDQ1 290 aa14.36□□□□□ -0.11
CCDC78-204ENST00000439619 HRASLSQ9HDD0 168 aa14.36□□□□□ -0.11
CCDC78-204ENST00000439619 SLC2A9Q9NRM0 540 aa14.36□□□□□ -0.11
CCDC78-204ENST00000439619 A0A087WXM4 84 aa14.35□□□□□ -0.11
CCDC78-204ENST00000439619 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.35□□□□□ -0.11
CCDC78-204ENST00000439619 RBFOX2O43251 390 aaKnown RBP eCLIP14.35□□□□□ -0.11
CCDC78-204ENST00000439619 OR2J3O76001 311 aa14.35□□□□□ -0.11
CCDC78-204ENST00000439619 IGHV4-30-4P0DP06 118 aa14.35□□□□□ -0.11
CCDC78-204ENST00000439619 DEFA4P12838 97 aa14.35□□□□□ -0.11
CCDC78-204ENST00000439619 HIST1H1BP16401 226 aaKnown RBP14.35□□□□□ -0.11
CCDC78-204ENST00000439619 EIF4EBP1Q13541 118 aaPredicted RBP14.35□□□□□ -0.11
CCDC78-204ENST00000439619 UBE2NLQ5JXB2 153 aa14.35□□□□□ -0.11
CCDC78-204ENST00000439619 SSX9Q7RTT3 188 aa14.35□□□□□ -0.11
CCDC78-204ENST00000439619 OR2K2Q8NGT1 345 aa14.35□□□□□ -0.11
CCDC78-204ENST00000439619 GIMAP1Q8WWP7 306 aa14.35□□□□□ -0.11
CCDC78-204ENST00000439619 FBXL7Q9UJT9 491 aa14.35□□□□□ -0.11
CCDC78-204ENST00000439619 HMX3A6NHT5 357 aa14.34□□□□□ -0.11
CCDC78-204ENST00000439619 A8MZ25 164 aa14.34□□□□□ -0.11
CCDC78-204ENST00000439619 TNFAIP8O95379 198 aa14.34□□□□□ -0.11
CCDC78-204ENST00000439619 CSN3P07498 182 aa14.34□□□□□ -0.11
CCDC78-204ENST00000439619 HLA-GP17693 338 aa14.34□□□□□ -0.11
CCDC78-204ENST00000439619 TAS2R31P59538 309 aa14.34□□□□□ -0.11
CCDC78-204ENST00000439619 ZNF45Q02386 682 aa14.34□□□□□ -0.11
CCDC78-204ENST00000439619 TMEM69Q5SWH9 247 aa14.34□□□□□ -0.11
CCDC78-204ENST00000439619 TMEM17Q86X19 198 aa14.34□□□□□ -0.11
CCDC78-204ENST00000439619 TSPAN14Q8NG11 270 aa14.34□□□□□ -0.11
CCDC78-204ENST00000439619 TUBA4BQ9H853 241 aa14.34□□□□□ -0.11
CCDC78-204ENST00000439619 BET1LQ9NYM9 111 aa14.34□□□□□ -0.11
CCDC78-204ENST00000439619 BMPR1BO00238 502 aa14.33□□□□□ -0.12
CCDC78-204ENST00000439619 SULT1C2O00338 296 aa14.33□□□□□ -0.12
CCDC78-204ENST00000439619 GGCTO75223 188 aaKnown RBP14.33□□□□□ -0.12
CCDC78-204ENST00000439619 RBMXL2O75526 392 aaKnown RBP14.33□□□□□ -0.12
CCDC78-204ENST00000439619 HPRT1P00492 218 aa14.33□□□□□ -0.12
CCDC78-204ENST00000439619 FCER2P06734 321 aa14.33□□□□□ -0.12
CCDC78-204ENST00000439619 ZNF735P0CB33 412 aa14.33□□□□□ -0.12
CCDC78-204ENST00000439619 PTHLHP12272 177 aa14.33□□□□□ -0.12
CCDC78-204ENST00000439619 NQO2P16083 231 aa14.33□□□□□ -0.12
CCDC78-204ENST00000439619 IL34Q6ZMJ4 242 aa14.33□□□□□ -0.12
CCDC78-204ENST00000439619 Q8N1Y9 231 aa14.33□□□□□ -0.12
CCDC78-204ENST00000439619 SAMD12Q8N8I0 201 aa14.33□□□□□ -0.12
CCDC78-204ENST00000439619 DYNLRB2Q8TF09 96 aa14.33□□□□□ -0.12
CCDC78-204ENST00000439619 COMMD5Q9GZQ3 224 aa14.33□□□□□ -0.12
CCDC78-204ENST00000439619 EHFQ9NZC4 300 aa14.33□□□□□ -0.12
CCDC78-204ENST00000439619 DNAH9Q9NYC9 4486 aa14.33□□□□□ -0.12
CCDC78-204ENST00000439619 TEX22C9J3V5 150 aa14.32□□□□□ -0.12
CCDC78-204ENST00000439619 CYB5BO43169 146 aa14.32□□□□□ -0.12
CCDC78-204ENST00000439619 IL6RP08887 468 aaPredicted RBP14.32□□□□□ -0.12
CCDC78-204ENST00000439619 PSMB6P28072 239 aa14.32□□□□□ -0.12
CCDC78-204ENST00000439619 BRWD1-AS2P59051 145 aa14.32□□□□□ -0.12
CCDC78-204ENST00000439619 TAS2R46P59540 309 aa14.32□□□□□ -0.12
CCDC78-204ENST00000439619 AADACL3Q5VUY0 350 aa14.32□□□□□ -0.12
CCDC78-204ENST00000439619 OR4A47Q6IF82 309 aa14.32□□□□□ -0.12
CCDC78-204ENST00000439619 DMBX1Q8NFW5 382 aa14.32□□□□□ -0.12
CCDC78-204ENST00000439619 EEF1AKMT3Q96AZ1 226 aa14.32□□□□□ -0.12
CCDC78-204ENST00000439619 GPHA2Q96T91 129 aa14.32□□□□□ -0.12
CCDC78-204ENST00000439619 SMIM31A0A1B0GVY4 71 aa14.31□□□□□ -0.12
CCDC78-204ENST00000439619 MEIS3P1A6NDR6 274 aa14.31□□□□□ -0.12
CCDC78-204ENST00000439619 CRYGCP07315 174 aa14.31□□□□□ -0.12
CCDC78-204ENST00000439619 RPS19P39019 145 aaKnown RBP14.31□□□□□ -0.12
CCDC78-204ENST00000439619 ERVK-16P61578 105 aa14.31□□□□□ -0.12
CCDC78-204ENST00000439619 LSM3P62310 102 aaKnown RBP14.31□□□□□ -0.12
CCDC78-204ENST00000439619 CMTM1Q8IZ96 169 aa14.31□□□□□ -0.12
CCDC78-204ENST00000439619 OR5H2Q8NGV7 314 aa14.31□□□□□ -0.12
CCDC78-204ENST00000439619 OR51H1Q8NH63 302 aa14.31□□□□□ -0.12
CCDC78-204ENST00000439619 MUC7Q8TAX7 377 aa14.31□□□□□ -0.12
CCDC78-204ENST00000439619 PLEKHA2Q9HB19 425 aa14.31□□□□□ -0.12
CCDC78-204ENST00000439619 C19orf73Q9NVV2 129 aa14.31□□□□□ -0.12
CCDC78-204ENST00000439619 THYN1Q9P016 225 aa14.31□□□□□ -0.12
CCDC78-204ENST00000439619 ADAM30Q9UKF2 790 aa14.31□□□□□ -0.12
CCDC78-204ENST00000439619 NBEAL2Q6ZNJ1 2754 aa14.3□□□□□ -0.12
CCDC78-204ENST00000439619 PRSS3P35030 304 aa14.3□□□□□ -0.12
CCDC78-204ENST00000439619 FAM106AQ4KMX7 169 aa14.3□□□□□ -0.12
CCDC78-204ENST00000439619 ZNF818PQ6ZRF7 136 aa14.3□□□□□ -0.12
CCDC78-204ENST00000439619 LAX1Q8IWV1 398 aa14.3□□□□□ -0.12
CCDC78-204ENST00000439619 YIPF6Q96EC8 236 aa14.3□□□□□ -0.12
CCDC78-204ENST00000439619 CXorf58Q96LI9 332 aa14.3□□□□□ -0.12
CCDC78-204ENST00000439619 SRSF8Q9BRL6 282 aaKnown RBP14.3□□□□□ -0.12
CCDC78-204ENST00000439619 SLC2A8Q9NY64 477 aa14.3□□□□□ -0.12
CCDC78-204ENST00000439619 COMMD9Q9P000 198 aa14.3□□□□□ -0.12
CCDC78-204ENST00000439619 SORL1Q92673 2214 aa14.29□□□□□ -0.12
CCDC78-204ENST00000439619 FGF2P09038 288 aa14.29□□□□□ -0.12
CCDC78-204ENST00000439619 AREGP15514 252 aa14.29□□□□□ -0.12
CCDC78-204ENST00000439619 CTRB1P17538 263 aa14.29□□□□□ -0.12
CCDC78-204ENST00000439619 S100GP29377 79 aa14.29□□□□□ -0.12
CCDC78-204ENST00000439619 ARL3P36405 182 aa14.29□□□□□ -0.12
CCDC78-204ENST00000439619 TAS2R20P59543 309 aa14.29□□□□□ -0.12
CCDC78-204ENST00000439619 POU2AF1Q16633 256 aa14.29□□□□□ -0.12
CCDC78-204ENST00000439619 CTRB2Q6GPI1 263 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms