RNA–Protein interactions for RNA: ENST00000439512.5

TOM1-207, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-207ENST00000439512 MPPED1O15442 326 aa12.81□□□□□ -0.36
TOM1-207ENST00000439512 HPRT1P00492 218 aa12.81□□□□□ -0.36
TOM1-207ENST00000439512 RLN1P04808 185 aa12.81□□□□□ -0.36
TOM1-207ENST00000439512 TNFSF8P32971 234 aa12.81□□□□□ -0.36
TOM1-207ENST00000439512 IL18Q14116 193 aa12.81□□□□□ -0.36
TOM1-207ENST00000439512 PHLDA2Q53GA4 152 aa12.81□□□□□ -0.36
TOM1-207ENST00000439512 C10orf55Q5SWW7 151 aa12.81□□□□□ -0.36
TOM1-207ENST00000439512 PUSL1Q8N0Z8 303 aaKnown RBP12.81□□□□□ -0.36
TOM1-207ENST00000439512 TMEM167AQ8TBQ9 72 aa12.81□□□□□ -0.36
TOM1-207ENST00000439512 CD300LFQ8TDQ1 290 aa12.81□□□□□ -0.36
TOM1-207ENST00000439512 SLA2Q9H6Q3 261 aa12.81□□□□□ -0.36
TOM1-207ENST00000439512 KBTBD11O94819 623 aa12.8□□□□□ -0.36
TOM1-207ENST00000439512 IGHV3-11P01762 117 aa12.8□□□□□ -0.36
TOM1-207ENST00000439512 PRB2P02812 416 aaPredicted RBP12.8□□□□□ -0.36
TOM1-207ENST00000439512 F2RP25116 425 aa12.8□□□□□ -0.36
TOM1-207ENST00000439512 UCP3P55916 312 aa12.8□□□□□ -0.36
TOM1-207ENST00000439512 TAS2R31P59538 309 aa12.8□□□□□ -0.36
TOM1-207ENST00000439512 TAS2R19P59542 299 aa12.8□□□□□ -0.36
TOM1-207ENST00000439512 MRPS10P82664 201 aaKnown RBP12.8□□□□□ -0.36
TOM1-207ENST00000439512 OR4A47Q6IF82 309 aa12.8□□□□□ -0.36
TOM1-207ENST00000439512 TMEM229BQ8NBD8 167 aa12.8□□□□□ -0.36
TOM1-207ENST00000439512 DPF1Q92782 380 aa12.8□□□□□ -0.36
TOM1-207ENST00000439512 DGCR14Q96DF8 476 aaKnown RBP12.8□□□□□ -0.36
TOM1-207ENST00000439512 RSRP1Q9BUV0 290 aa12.8□□□□□ -0.36
TOM1-207ENST00000439512 NXF2Q9GZY0 626 aaKnown RBP12.8□□□□□ -0.36
TOM1-207ENST00000439512 ALX4Q9H161 411 aaPredicted RBP12.8□□□□□ -0.36
TOM1-207ENST00000439512 HRASLSQ9HDD0 168 aa12.8□□□□□ -0.36
TOM1-207ENST00000439512 RSL24D1Q9UHA3 163 aaKnown RBP12.8□□□□□ -0.36
TOM1-207ENST00000439512 TNCP24821 2201 aa12.79□□□□□ -0.36
TOM1-207ENST00000439512 FABP12A6NFH5 140 aa12.79□□□□□ -0.36
TOM1-207ENST00000439512 S1PR2O95136 353 aa12.79□□□□□ -0.36
TOM1-207ENST00000439512 DUS4LO95620 317 aaKnown RBP12.79□□□□□ -0.36
TOM1-207ENST00000439512 RAB3DO95716 219 aa12.79□□□□□ -0.36
TOM1-207ENST00000439512 RPA2P15927 270 aa12.79□□□□□ -0.36
TOM1-207ENST00000439512 NQO2P16083 231 aa12.79□□□□□ -0.36
TOM1-207ENST00000439512 S100GP29377 79 aa12.79□□□□□ -0.36
TOM1-207ENST00000439512 LPAR6P43657 344 aa12.79□□□□□ -0.36
TOM1-207ENST00000439512 RUNX1Q01196 453 aa12.79□□□□□ -0.36
TOM1-207ENST00000439512 FOXB2Q5VYV0 432 aa12.79□□□□□ -0.36
TOM1-207ENST00000439512 DMBX1Q8NFW5 382 aa12.79□□□□□ -0.36
TOM1-207ENST00000439512 OR4D10Q8NGI6 311 aa12.79□□□□□ -0.36
TOM1-207ENST00000439512 SPIN2AQ99865 258 aa12.79□□□□□ -0.36
TOM1-207ENST00000439512 SPIN2BQ9BPZ2 258 aa12.79□□□□□ -0.36
TOM1-207ENST00000439512 RBM38Q9H0Z9 239 aaKnown RBP12.79□□□□□ -0.36
TOM1-207ENST00000439512 PLEKHA2Q9HB19 425 aa12.79□□□□□ -0.36
TOM1-207ENST00000439512 COA4Q9NYJ1 87 aa12.79□□□□□ -0.36
TOM1-207ENST00000439512 RABL2AQ9UBK7 228 aaPredicted RBP12.79□□□□□ -0.36
TOM1-207ENST00000439512 RABL2BQ9UNT1 228 aa12.79□□□□□ -0.36
TOM1-207ENST00000439512 HMX3A6NHT5 357 aa12.78□□□□□ -0.36
TOM1-207ENST00000439512 H3BUA1 57 aa12.78□□□□□ -0.36
TOM1-207ENST00000439512 CD74P04233 296 aa12.78□□□□□ -0.36
TOM1-207ENST00000439512 OR9G9P0C7N8 305 aa12.78□□□□□ -0.36
TOM1-207ENST00000439512 PGAM2P15259 253 aa12.78□□□□□ -0.36
TOM1-207ENST00000439512 TBPP20226 339 aa12.78□□□□□ -0.36
TOM1-207ENST00000439512 MAS1LP35410 378 aa12.78□□□□□ -0.36
TOM1-207ENST00000439512 RPL8P62917 257 aaKnown RBP12.78□□□□□ -0.36
TOM1-207ENST00000439512 SSBP1Q04837 148 aaKnown RBP12.78□□□□□ -0.36
TOM1-207ENST00000439512 ZNF616Q08AN1 781 aa12.78□□□□□ -0.36
TOM1-207ENST00000439512 STEAP1BQ6NZ63 245 aa12.78□□□□□ -0.36
TOM1-207ENST00000439512 SLC38A6Q8IZM9 456 aa12.78□□□□□ -0.36
TOM1-207ENST00000439512 ARRDC1Q8N5I2 433 aa12.78□□□□□ -0.36
TOM1-207ENST00000439512 OR4A5Q8NH83 315 aa12.78□□□□□ -0.36
TOM1-207ENST00000439512 SMIM4Q8WVI0 70 aa12.78□□□□□ -0.36
TOM1-207ENST00000439512 FYTTD1Q96QD9 318 aaKnown RBP12.78□□□□□ -0.36
TOM1-207ENST00000439512 MCRIP2Q9BUT9 160 aaKnown RBP12.78□□□□□ -0.36
TOM1-207ENST00000439512 BET1LQ9NYM9 111 aa12.78□□□□□ -0.36
TOM1-207ENST00000439512 TRAV3A0A0B4J244 114 aa12.77□□□□□ -0.37
TOM1-207ENST00000439512 C13orf42A0A1B0GVH6 325 aa12.77□□□□□ -0.37
TOM1-207ENST00000439512 E7EUB6 86 aa12.77□□□□□ -0.37
TOM1-207ENST00000439512 UPK2O00526 184 aa12.77□□□□□ -0.37
TOM1-207ENST00000439512 CTDSPLO15194 276 aa12.77□□□□□ -0.37
TOM1-207ENST00000439512 IL6RP08887 468 aaPredicted RBP12.77□□□□□ -0.37
TOM1-207ENST00000439512 LGALS1P09382 135 aaKnown RBP12.77□□□□□ -0.37
TOM1-207ENST00000439512 MYOD1P15172 320 aa12.77□□□□□ -0.37
TOM1-207ENST00000439512 RPL27AP46776 148 aaKnown RBP12.77□□□□□ -0.37
TOM1-207ENST00000439512 FHL3Q13643 280 aa12.77□□□□□ -0.37
TOM1-207ENST00000439512 POU2AF1Q16633 256 aa12.77□□□□□ -0.37
TOM1-207ENST00000439512 ZNF585BQ52M93 769 aa12.77□□□□□ -0.37
TOM1-207ENST00000439512 PDLIM3Q53GG5 364 aaPredicted RBP12.77□□□□□ -0.37
TOM1-207ENST00000439512 TBC1D26Q86UD7 250 aa12.77□□□□□ -0.37
TOM1-207ENST00000439512 LHFPL1Q86WI0 220 aa12.77□□□□□ -0.37
TOM1-207ENST00000439512 ADAD2Q8NCV1 583 aaKnown RBP12.77□□□□□ -0.37
TOM1-207ENST00000439512 SOSTQ9BQB4 213 aa12.77□□□□□ -0.37
TOM1-207ENST00000439512 A0A0G2JLM5 398 aa12.76□□□□□ -0.37
TOM1-207ENST00000439512 BRI3O95415 125 aa12.76□□□□□ -0.37
TOM1-207ENST00000439512 KRASP01116 189 aa12.76□□□□□ -0.37
TOM1-207ENST00000439512 PRH1P02810 166 aa12.76□□□□□ -0.37
TOM1-207ENST00000439512 OR8U8P0C7N1 319 aa12.76□□□□□ -0.37
TOM1-207ENST00000439512 HLA-GP17693 338 aa12.76□□□□□ -0.37
TOM1-207ENST00000439512 PI3P19957 117 aa12.76□□□□□ -0.37
TOM1-207ENST00000439512 HOXD3P31249 432 aaPredicted RBP12.76□□□□□ -0.37
TOM1-207ENST00000439512 ERVK-16P61578 105 aa12.76□□□□□ -0.37
TOM1-207ENST00000439512 DEFA5Q01523 94 aa12.76□□□□□ -0.37
TOM1-207ENST00000439512 SCGB2B2Q4G0G5 96 aa12.76□□□□□ -0.37
TOM1-207ENST00000439512 TTC9CQ8N5M4 171 aa12.76□□□□□ -0.37
TOM1-207ENST00000439512 TERB2Q8NHR7 220 aa12.76□□□□□ -0.37
TOM1-207ENST00000439512 TMEM140Q9NV12 185 aa12.76□□□□□ -0.37
TOM1-207ENST00000439512 COMMD9Q9P000 198 aa12.76□□□□□ -0.37
TOM1-207ENST00000439512 IGHV4OR15-8A0A075B7B6 117 aa12.75□□□□□ -0.37
TOM1-207ENST00000439512 A0A087WW49 117 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms