RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 PPP1R27Q86WC6 154 aa10.11□□□□□ -0.79
SCLT1-202ENST00000439369 MMD2Q8IY49 270 aa10.11□□□□□ -0.79
SCLT1-202ENST00000439369 C5orf56Q8N8D9 126 aa10.11□□□□□ -0.79
SCLT1-202ENST00000439369 Q8N9W7 124 aa10.11□□□□□ -0.79
SCLT1-202ENST00000439369 MED28Q9H204 178 aa10.11□□□□□ -0.79
SCLT1-202ENST00000439369 FKBP11Q9NYL4 201 aa10.11□□□□□ -0.79
SCLT1-202ENST00000439369 PRR13Q9NZ81 148 aa10.11□□□□□ -0.79
SCLT1-202ENST00000439369 METTL1Q9UBP6 276 aaKnown RBP10.11□□□□□ -0.79
SCLT1-202ENST00000439369 PRNDQ9UKY0 176 aa10.11□□□□□ -0.79
SCLT1-202ENST00000439369 DNAJC9-AS1A6NH13 148 aa10.1□□□□□ -0.79
SCLT1-202ENST00000439369 NCBP2LA6PVI3 153 aaKnown RBP10.1□□□□□ -0.79
SCLT1-202ENST00000439369 HLA-DRB1P01911 266 aa10.1□□□□□ -0.79
SCLT1-202ENST00000439369 RNASE1P07998 156 aaKnown RBP10.1□□□□□ -0.79
SCLT1-202ENST00000439369 SULT1A3P0DMM9 295 aa10.1□□□□□ -0.79
SCLT1-202ENST00000439369 SULT1A4P0DMN0 295 aa10.1□□□□□ -0.79
SCLT1-202ENST00000439369 F2RL1P55085 397 aa10.1□□□□□ -0.79
SCLT1-202ENST00000439369 RRAS2P62070 204 aaPredicted RBP10.1□□□□□ -0.79
SCLT1-202ENST00000439369 SMCO1Q147U7 214 aa10.1□□□□□ -0.79
SCLT1-202ENST00000439369 PLGLAQ15195 96 aa10.1□□□□□ -0.79
SCLT1-202ENST00000439369 LY6EQ16553 131 aa10.1□□□□□ -0.79
SCLT1-202ENST00000439369 PRSS8Q16651 343 aa10.1□□□□□ -0.79
SCLT1-202ENST00000439369 FBLN7Q53RD9 439 aa10.1□□□□□ -0.79
SCLT1-202ENST00000439369 GGNBP1Q5YKI7 109 aa10.1□□□□□ -0.79
SCLT1-202ENST00000439369 THOC7Q6I9Y2 204 aaKnown RBP10.1□□□□□ -0.79
SCLT1-202ENST00000439369 TMEM219Q86XT9 240 aa10.1□□□□□ -0.79
SCLT1-202ENST00000439369 VKORC1L1Q8N0U8 176 aa10.1□□□□□ -0.79
SCLT1-202ENST00000439369 ASB13Q8WXK3 278 aa10.1□□□□□ -0.79
SCLT1-202ENST00000439369 RASL11BQ9BPW5 248 aa10.1□□□□□ -0.79
SCLT1-202ENST00000439369 FOXA2Q9Y261 457 aaPredicted RBP10.1□□□□□ -0.79
SCLT1-202ENST00000439369 ZNF257Q9Y2Q1 563 aa10.1□□□□□ -0.79
SCLT1-202ENST00000439369 ZNF469Q96JG9 3925 aaPredicted RBP10.09□□□□□ -0.79
SCLT1-202ENST00000439369 C15orf61A6NNL5 157 aa10.09□□□□□ -0.79
SCLT1-202ENST00000439369 TCF21O43680 179 aa10.09□□□□□ -0.79
SCLT1-202ENST00000439369 CHST1O43916 411 aa10.09□□□□□ -0.79
SCLT1-202ENST00000439369 GPR137BO60478 399 aa10.09□□□□□ -0.79
SCLT1-202ENST00000439369 ADAP1O75689 374 aa10.09□□□□□ -0.79
SCLT1-202ENST00000439369 HOXB5P09067 269 aa10.09□□□□□ -0.79
SCLT1-202ENST00000439369 CNTFRP26992 372 aa10.09□□□□□ -0.79
SCLT1-202ENST00000439369 RPL8P62917 257 aaKnown RBP10.09□□□□□ -0.79
SCLT1-202ENST00000439369 RELBQ01201 579 aa10.09□□□□□ -0.79
SCLT1-202ENST00000439369 GSG1LQ6UXU4 331 aa10.09□□□□□ -0.79
SCLT1-202ENST00000439369 SSX9Q7RTT3 188 aa10.09□□□□□ -0.79
SCLT1-202ENST00000439369 ZNF429Q86V71 674 aa10.09□□□□□ -0.79
SCLT1-202ENST00000439369 UXS1Q8NBZ7 420 aa10.09□□□□□ -0.79
SCLT1-202ENST00000439369 OR5M8Q8NGP6 311 aa10.09□□□□□ -0.79
SCLT1-202ENST00000439369 OR4A16Q8NH70 328 aa10.09□□□□□ -0.79
SCLT1-202ENST00000439369 GPR146Q96CH1 333 aa10.09□□□□□ -0.79
SCLT1-202ENST00000439369 CHIAQ9BZP6 476 aa10.09□□□□□ -0.79
SCLT1-202ENST00000439369 NPFFR1Q9GZQ6 430 aa10.09□□□□□ -0.79
SCLT1-202ENST00000439369 FBXL15Q9H469 300 aa10.09□□□□□ -0.79
SCLT1-202ENST00000439369 RANBP3Q9H6Z4 567 aaPredicted RBP10.09□□□□□ -0.79
SCLT1-202ENST00000439369 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.09□□□□□ -0.79
SCLT1-202ENST00000439369 TMEM14BQ9NUH8 114 aa10.09□□□□□ -0.79
SCLT1-202ENST00000439369 SONP18583 2426 aaKnown RBP10.08□□□□□ -0.8
SCLT1-202ENST00000439369 MAST4O15021 2626 aa10.08□□□□□ -0.8
SCLT1-202ENST00000439369 A0A0G2JRQ6 117 aa10.08□□□□□ -0.8
SCLT1-202ENST00000439369 FAM90A26D6RGX4 464 aa10.08□□□□□ -0.8
SCLT1-202ENST00000439369 ACTL6BO94805 426 aa10.08□□□□□ -0.8
SCLT1-202ENST00000439369 AMY1AP04745 511 aa10.08□□□□□ -0.8
SCLT1-202ENST00000439369 TRAPPC2P0DI81 140 aa10.08□□□□□ -0.8
SCLT1-202ENST00000439369 TRAPPC2BP0DI82 140 aa10.08□□□□□ -0.8
SCLT1-202ENST00000439369 UBA52P62987 128 aaKnown RBP10.08□□□□□ -0.8
SCLT1-202ENST00000439369 CYCSP99999 105 aaKnown RBP10.08□□□□□ -0.8
SCLT1-202ENST00000439369 PDLIM3Q53GG5 364 aaPredicted RBP10.08□□□□□ -0.8
SCLT1-202ENST00000439369 ZNF562Q6V9R5 426 aa10.08□□□□□ -0.8
SCLT1-202ENST00000439369 OR5B3Q8NH48 314 aa10.08□□□□□ -0.8
SCLT1-202ENST00000439369 OR52E5Q8NH55 327 aa10.08□□□□□ -0.8
SCLT1-202ENST00000439369 CHAC2Q8WUX2 184 aa10.08□□□□□ -0.8
SCLT1-202ENST00000439369 SRSF8Q9BRL6 282 aaKnown RBP10.08□□□□□ -0.8
SCLT1-202ENST00000439369 ZNF430Q9H8G1 570 aaPredicted RBP10.08□□□□□ -0.8
SCLT1-202ENST00000439369 ESM1Q9NQ30 184 aa10.08□□□□□ -0.8
SCLT1-202ENST00000439369 CACNG5Q9UF02 275 aa10.08□□□□□ -0.8
SCLT1-202ENST00000439369 ZNF580Q9UK33 172 aa10.08□□□□□ -0.8
SCLT1-202ENST00000439369 NSD1Q96L73 2696 aaPredicted RBP10.07□□□□□ -0.8
SCLT1-202ENST00000439369 GOSR2O14653 212 aa10.07□□□□□ -0.8
SCLT1-202ENST00000439369 KCNAB3O43448 404 aa10.07□□□□□ -0.8
SCLT1-202ENST00000439369 PITX3O75364 302 aa10.07□□□□□ -0.8
SCLT1-202ENST00000439369 LY86O95711 162 aa10.07□□□□□ -0.8
SCLT1-202ENST00000439369 OR9G9P0C7N8 305 aa10.07□□□□□ -0.8
SCLT1-202ENST00000439369 COMPP49747 757 aaPredicted RBP10.07□□□□□ -0.8
SCLT1-202ENST00000439369 SRSF4Q08170 494 aaKnown RBP10.07□□□□□ -0.8
SCLT1-202ENST00000439369 MRGPRG-AS1Q2M3A8 158 aa10.07□□□□□ -0.8
SCLT1-202ENST00000439369 IAH1Q2TAA2 248 aaPredicted RBP10.07□□□□□ -0.8
SCLT1-202ENST00000439369 C2orf50Q96LR7 162 aa10.07□□□□□ -0.8
SCLT1-202ENST00000439369 COMMD5Q9GZQ3 224 aa10.07□□□□□ -0.8
SCLT1-202ENST00000439369 TPSG1Q9NRR2 321 aa10.07□□□□□ -0.8
SCLT1-202ENST00000439369 MGAT4CQ9UBM8 478 aa10.07□□□□□ -0.8
SCLT1-202ENST00000439369 C5orf51A6NDU8 294 aa10.06□□□□□ -0.8
SCLT1-202ENST00000439369 HMX3A6NHT5 357 aa10.06□□□□□ -0.8
SCLT1-202ENST00000439369 TRIM77I1YAP6 450 aa10.06□□□□□ -0.8
SCLT1-202ENST00000439369 RBMXL2O75526 392 aaKnown RBP10.06□□□□□ -0.8
SCLT1-202ENST00000439369 IGHG2P01859 326 aa10.06□□□□□ -0.8
SCLT1-202ENST00000439369 HSPE1P61604 102 aaKnown RBP10.06□□□□□ -0.8
SCLT1-202ENST00000439369 CX3CL1P78423 397 aa10.06□□□□□ -0.8
SCLT1-202ENST00000439369 Q6ZRM9 215 aa10.06□□□□□ -0.8
SCLT1-202ENST00000439369 HSD17B13Q7Z5P4 300 aaPredicted RBP10.06□□□□□ -0.8
SCLT1-202ENST00000439369 MRPL41Q8IXM3 137 aaKnown RBP10.06□□□□□ -0.8
SCLT1-202ENST00000439369 Q8N2B8 174 aa10.06□□□□□ -0.8
SCLT1-202ENST00000439369 ZBTB8BQ8NAP8 495 aaPredicted RBP10.06□□□□□ -0.8
SCLT1-202ENST00000439369 OR1L8Q8NGR8 309 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms