RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 SLC25A6P12236 298 aa13.34□□□□□ -0.27
DHFR-201ENST00000439211 CA7P43166 264 aa13.34□□□□□ -0.27
DHFR-201ENST00000439211 MAFAQ8NHW3 353 aaPredicted RBP13.34□□□□□ -0.27
DHFR-201ENST00000439211 EP300Q09472 2414 aaPredicted RBP13.34□□□□□ -0.27
DHFR-201ENST00000439211 PDE6DO43924 150 aa13.34□□□□□ -0.27
DHFR-201ENST00000439211 ATP5G3P48201 142 aa13.34□□□□□ -0.27
DHFR-201ENST00000439211 CKS1BP61024 79 aa13.34□□□□□ -0.27
DHFR-201ENST00000439211 MORN2Q502X0 79 aa13.34□□□□□ -0.27
DHFR-201ENST00000439211 ZNF818PQ6ZRF7 136 aa13.34□□□□□ -0.27
DHFR-201ENST00000439211 SARAFQ96BY9 339 aa13.34□□□□□ -0.27
DHFR-201ENST00000439211 DEGS1O15121 323 aa13.34□□□□□ -0.27
DHFR-201ENST00000439211 RHBDL1O75783 438 aa13.34□□□□□ -0.27
DHFR-201ENST00000439211 STAG3L3P0CL85 134 aa13.34□□□□□ -0.27
DHFR-201ENST00000439211 ZNF83P51522 516 aa13.34□□□□□ -0.27
DHFR-201ENST00000439211 ID3Q02535 119 aa13.34□□□□□ -0.27
DHFR-201ENST00000439211 SIGLEC12Q96PQ1 595 aa13.34□□□□□ -0.27
DHFR-201ENST00000439211 QTRT1Q9BXR0 403 aaKnown RBP13.34□□□□□ -0.27
DHFR-201ENST00000439211 NBASA2RRP1 2371 aa13.34□□□□□ -0.27
DHFR-201ENST00000439211 PRRC2CQ9Y520 2896 aaKnown RBP13.34□□□□□ -0.27
DHFR-201ENST00000439211 CA2P00918 260 aa13.33□□□□□ -0.27
DHFR-201ENST00000439211 EDDM3BP56851 147 aa13.33□□□□□ -0.27
DHFR-201ENST00000439211 C3AR1Q16581 482 aa13.33□□□□□ -0.27
DHFR-201ENST00000439211 KRTCAP3Q53RY4 240 aa13.33□□□□□ -0.27
DHFR-201ENST00000439211 SLC23A3Q6PIS1 610 aa13.33□□□□□ -0.27
DHFR-201ENST00000439211 TUSC5Q8IXB3 177 aa13.33□□□□□ -0.27
DHFR-201ENST00000439211 OR2T6Q8NHC8 308 aa13.33□□□□□ -0.27
DHFR-201ENST00000439211 CLEC7AQ9BXN2 247 aa13.33□□□□□ -0.27
DHFR-201ENST00000439211 WDR54Q9H977 334 aa13.33□□□□□ -0.27
DHFR-201ENST00000439211 C7orf71A4D174 169 aa13.33□□□□□ -0.28
DHFR-201ENST00000439211 ACSF3Q4G176 576 aaPredicted RBP13.33□□□□□ -0.28
DHFR-201ENST00000439211 MMD2Q8IY49 270 aa13.33□□□□□ -0.28
DHFR-201ENST00000439211 TMEM251Q8N6I4 163 aa13.33□□□□□ -0.28
DHFR-201ENST00000439211 ZNF525Q8N782 197 aa13.33□□□□□ -0.28
DHFR-201ENST00000439211 EML6Q6ZMW3 1958 aa13.33□□□□□ -0.28
DHFR-201ENST00000439211 PDLIM3Q53GG5 364 aaPredicted RBP13.33□□□□□ -0.28
DHFR-201ENST00000439211 ZNF391Q9UJN7 358 aa13.33□□□□□ -0.28
DHFR-201ENST00000439211 POLEQ07864 2286 aa13.33□□□□□ -0.28
DHFR-201ENST00000439211 SPTBN5Q9NRC6 3674 aaKnown RBP13.33□□□□□ -0.28
DHFR-201ENST00000439211 YPEL1O60688 119 aa13.33□□□□□ -0.28
DHFR-201ENST00000439211 CA6P23280 308 aa13.33□□□□□ -0.28
DHFR-201ENST00000439211 UBE2G1P62253 170 aa13.33□□□□□ -0.28
DHFR-201ENST00000439211 FAM71F2Q6NXP2 309 aa13.33□□□□□ -0.28
DHFR-201ENST00000439211 YPEL2Q96QA6 119 aa13.33□□□□□ -0.28
DHFR-201ENST00000439211 DOCK10Q96BY6 2186 aa13.32□□□□□ -0.28
DHFR-201ENST00000439211 SYNGR1O43759 233 aa13.32□□□□□ -0.28
DHFR-201ENST00000439211 IGLL1P15814 213 aa13.32□□□□□ -0.28
DHFR-201ENST00000439211 LRRC75BQ2VPJ9 315 aa13.32□□□□□ -0.28
DHFR-201ENST00000439211 ABHD14BQ96IU4 210 aa13.32□□□□□ -0.28
DHFR-201ENST00000439211 IMMP1LQ96LU5 166 aa13.32□□□□□ -0.28
DHFR-201ENST00000439211 NGFP01138 241 aa13.32□□□□□ -0.28
DHFR-201ENST00000439211 GRPP07492 148 aa13.32□□□□□ -0.28
DHFR-201ENST00000439211 AZU1P20160 251 aa13.32□□□□□ -0.28
DHFR-201ENST00000439211 LHX2P50458 406 aa13.32□□□□□ -0.28
DHFR-201ENST00000439211 RAB9AP51151 201 aa13.32□□□□□ -0.28
DHFR-201ENST00000439211 PET117Q6UWS5 81 aa13.32□□□□□ -0.28
DHFR-201ENST00000439211 LRP4O75096 1905 aa13.32□□□□□ -0.28
DHFR-201ENST00000439211 hCG_38984A0A1B0GV85 526 aa13.32□□□□□ -0.28
DHFR-201ENST00000439211 OR4C46A6NHA9 309 aa13.32□□□□□ -0.28
DHFR-201ENST00000439211 H3BUT2 72 aa13.32□□□□□ -0.28
DHFR-201ENST00000439211 NEURL1O76050 574 aa13.32□□□□□ -0.28
DHFR-201ENST00000439211 CRYGSP22914 178 aa13.32□□□□□ -0.28
DHFR-201ENST00000439211 LTC4SQ16873 150 aa13.32□□□□□ -0.28
DHFR-201ENST00000439211 CLDN23Q96B33 292 aa13.32□□□□□ -0.28
DHFR-201ENST00000439211 K7EQM0 130 aa13.31□□□□□ -0.28
DHFR-201ENST00000439211 ZNF808Q8N4W9 903 aaPredicted RBP13.31□□□□□ -0.28
DHFR-201ENST00000439211 TECRQ9NZ01 308 aaKnown RBP13.31□□□□□ -0.28
DHFR-201ENST00000439211 THYN1Q9P016 225 aa13.31□□□□□ -0.28
DHFR-201ENST00000439211 OR51B2Q9Y5P1 312 aa13.31□□□□□ -0.28
DHFR-201ENST00000439211 A0A1W2PS18 150 aa13.31□□□□□ -0.28
DHFR-201ENST00000439211 TMEM164Q5U3C3 297 aa13.31□□□□□ -0.28
DHFR-201ENST00000439211 HAPLN4Q86UW8 402 aa13.31□□□□□ -0.28
DHFR-201ENST00000439211 C5orf17Q8NAS9 161 aa13.31□□□□□ -0.28
DHFR-201ENST00000439211 OR8B2Q96RD0 313 aa13.31□□□□□ -0.28
DHFR-201ENST00000439211 MTCH1Q9NZJ7 389 aa13.31□□□□□ -0.28
DHFR-201ENST00000439211 CRIM1Q9NZV1 1036 aa13.31□□□□□ -0.28
DHFR-201ENST00000439211 RNF114Q9Y508 228 aa13.31□□□□□ -0.28
DHFR-201ENST00000439211 IGKV1D-13A0A0B4J2D9 117 aa13.31□□□□□ -0.28
DHFR-201ENST00000439211 ISLRO14498 428 aa13.31□□□□□ -0.28
DHFR-201ENST00000439211 IGKV1-13P0DP09 117 aa13.31□□□□□ -0.28
DHFR-201ENST00000439211 PSG2P11465 335 aa13.31□□□□□ -0.28
DHFR-201ENST00000439211 NTF4P34130 210 aa13.31□□□□□ -0.28
DHFR-201ENST00000439211 GMPPAQ96IJ6 420 aaPredicted RBP13.31□□□□□ -0.28
DHFR-201ENST00000439211 IL36BQ9NZH7 164 aa13.31□□□□□ -0.28
DHFR-201ENST00000439211 PIGBOS1A0A0B4J2F0 54 aa13.3□□□□□ -0.28
DHFR-201ENST00000439211 KLF7O75840 302 aaPredicted RBP13.3□□□□□ -0.28
DHFR-201ENST00000439211 MC5RP33032 325 aa13.3□□□□□ -0.28
DHFR-201ENST00000439211 ATP6V0BQ99437 205 aa13.3□□□□□ -0.28
DHFR-201ENST00000439211 TAX1BP3O14907 124 aa13.3□□□□□ -0.28
DHFR-201ENST00000439211 APCSP02743 223 aa13.3□□□□□ -0.28
DHFR-201ENST00000439211 OR10J4P0C629 311 aa13.3□□□□□ -0.28
DHFR-201ENST00000439211 YPEL3P61236 119 aaPredicted RBP13.3□□□□□ -0.28
DHFR-201ENST00000439211 BPIFA4PQ86YQ2 179 aa13.3□□□□□ -0.28
DHFR-201ENST00000439211 OR8B3Q8NGG8 313 aa13.3□□□□□ -0.28
DHFR-201ENST00000439211 WFDC12Q8WWY7 111 aa13.3□□□□□ -0.28
DHFR-201ENST00000439211 OR5P3Q8WZ94 311 aa13.3□□□□□ -0.28
DHFR-201ENST00000439211 SPTAN1Q13813 2472 aaKnown RBP13.3□□□□□ -0.28
DHFR-201ENST00000439211 ROS1P08922 2347 aa13.3□□□□□ -0.28
DHFR-201ENST00000439211 A0A087X0K7 114 aa13.3□□□□□ -0.28
DHFR-201ENST00000439211 PLA2G5P39877 138 aa13.3□□□□□ -0.28
DHFR-201ENST00000439211 CTRLP40313 264 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms