RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 CRYGAP11844 174 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 ZNF35P13682 527 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 HLA-GP17693 338 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 PSMB5P28074 263 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 IMPA1P29218 277 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 CEACAM3P40198 252 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 CDK9P50750 372 aaKnown RBP1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 RAB13P51153 203 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 RORCP51449 518 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 TMBIM6P55061 237 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 BIDP55957 195 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR4D2P58180 307 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 KRTAP12-3P60328 96 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 GABARAPL2P60520 117 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 SELENOWP63302 87 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 REEP5Q00765 189 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 IL5RAQ01344 420 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 HMGCS1Q01581 520 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 PRDX1Q06830 199 aaKnown RBP1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 C2orf80Q0P641 193 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 MAD2L1BPQ15013 274 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 OXA1LQ15070 435 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 TAL2Q16559 108 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 POU2AF1Q16633 256 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 BSXQ3C1V8 233 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 LINC00483Q53H64 154 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 SPIN4Q56A73 249 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 TMEM255AQ5JRV8 349 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 ACTL10Q5JWF8 245 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 CLVS2Q5SYC1 327 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 CPTPQ5TA50 214 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 UBE2UQ5VVX9 321 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 Q5W150 140 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 KDM4DQ6B0I6 523 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 MED27Q6P2C8 311 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 TRIM40Q6P9F5 258 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 DHRS4L2Q6PKH6 230 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 TMEM205Q6UW68 189 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 RPS27LQ71UM5 84 aaKnown RBP1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 C6orf120Q7Z4R8 191 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 LRP11Q86VZ4 500 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 LYPD6Q86Y78 171 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 CMTM1Q8IZ96 169 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 STPG2Q8N412 459 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 CBR4Q8N4T8 237 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 LINC00471Q8N535 108 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 KRTCAP2Q8N6L1 136 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 ZNF615Q8N8J6 731 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 DUSP18Q8NEJ0 188 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 TTLQ8NG68 377 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR51G1Q8NGK1 321 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR10A6Q8NH74 314 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR5K1Q8NHB7 308 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 ZNF420Q8TAQ5 688 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 SYNPRQ8TBG9 265 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 DOK4Q8TEW6 326 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 ZFP90Q8TF47 636 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR5P2Q8WZ92 322 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 RAB8BQ92930 207 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 TM4SF18Q96CE8 201 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 YIPF6Q96EC8 236 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 PPP1R36Q96LQ0 422 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 PRAP1Q96NZ9 151 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR2M2Q96R28 347 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR52E6Q96RD3 313 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 DOK1Q99704 481 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 CIB1Q99828 191 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 APOL4Q9BPW4 351 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 AIF1LQ9BQI0 150 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 AGMATQ9BSE5 352 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 DCUN1D5Q9BTE7 237 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 DOHHQ9BU89 302 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 TMEM59Q9BXS4 323 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 ZNF717Q9BY31 904 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 PARD6GQ9BYG4 376 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 MRPS26Q9BYN8 205 aaKnown RBP1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 GABARAPL1Q9H0R8 117 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 TPT1P8Q9HAU6 139 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 BCL2L10Q9HD36 194 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 PLEKHJ1Q9NW61 149 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 THUMPD1Q9NXG2 353 aaKnown RBP1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 GIN1Q9NXP7 522 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 CLCF1Q9UBD9 225 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 SHPKQ9UHJ6 478 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 ING4Q9UNL4 249 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 SLC22A13Q9Y226 551 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 CFL2Q9Y281 166 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 TBL2Q9Y4P3 447 aaKnown RBP1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 INSIG2Q9Y5U4 225 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 SLC25A15Q9Y619 301 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 FLGP20930 4061 aaPredicted RBP1.34□□□□□ -2.2
HMGB1P18-201ENST00000438801 IGHV3-64DA0A0J9YX35 117 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 LOC100130705A0A1B0GUX0 176 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 A6NIZ1 184 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 G3V2T6 193 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 TRAPPC2LH3BP13 241 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 SMLR1H3BR10 107 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 H3BSA7 217 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 M0R036 132 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 PLPP1O14494 284 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms