RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 FABP3P05413 133 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 DBIP07108 87 aaKnown RBP1.78□□□□□ -2.12
CLK1-204ENST00000432425 MMP7P09237 267 aaPredicted RBP1.78□□□□□ -2.12
CLK1-204ENST00000432425 LGALS1P09382 135 aaKnown RBP1.78□□□□□ -2.12
CLK1-204ENST00000432425 CTLA4P16410 223 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 CNTFRP26992 372 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 G6PCP35575 357 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 RAB5CP51148 216 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 CRISP3P54108 245 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 COPZ1P61923 177 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 RPS23P62266 143 aaKnown RBP1.78□□□□□ -2.12
CLK1-204ENST00000432425 RPS28P62857 69 aaKnown RBP1.78□□□□□ -2.12
CLK1-204ENST00000432425 SELENOWP63302 87 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 HBA1P69905 142 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 CAV1Q03135 178 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 SLC38A11Q08AI6 406 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 INCA1Q0VD86 236 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 FZD2Q14332 565 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 ZNF181Q2M3W8 571 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 GLYATL3Q5SZD4 288 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 KPRPQ5T749 579 aaPredicted RBP1.78□□□□□ -2.12
CLK1-204ENST00000432425 DAZ4Q86SG3 579 aaKnown RBP1.78□□□□□ -2.12
CLK1-204ENST00000432425 SGPP2Q8IWX5 399 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 C12orf45Q8N5I9 185 aaPredicted RBP1.78□□□□□ -2.12
CLK1-204ENST00000432425 ZNF615Q8N8J6 731 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 OR9G1Q8NH87 305 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 ZNF418Q8TF45 676 aaPredicted RBP1.78□□□□□ -2.12
CLK1-204ENST00000432425 ORAOV1Q8WV07 137 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 CCL17Q92583 94 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 PLEKHB2Q96CS7 222 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 LINC01587Q99440 93 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 HSD17B10Q99714 261 aaKnown RBP1.78□□□□□ -2.12
CLK1-204ENST00000432425 SULT4A1Q9BR01 284 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 OR2J1Q9GZK6 312 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 SLC25A31Q9H0C2 315 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 DEFB127Q9H1M4 99 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 DAZ1Q9NQZ3 744 aaKnown RBP1.78□□□□□ -2.12
CLK1-204ENST00000432425 PRTFDC1Q9NRG1 225 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 SCN3BQ9NY72 215 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 ZNF226Q9NYT6 803 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 RBM12B-AS1Q9P1G2 102 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 NAT8BQ9UHF3 227 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 HS3ST2Q9Y278 367 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 THOC2Q8NI27 1593 aaKnown RBP1.78□□□□□ -2.12
CLK1-204ENST00000432425 CUL7Q14999 1698 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 GPR179Q6PRD1 2367 aa1.78□□□□□ -2.12
CLK1-204ENST00000432425 CCDC18Q5T9S5 1454 aa1.78□□□□□ -2.13
CLK1-204ENST00000432425 FER1L6Q2WGJ9 1857 aa1.78□□□□□ -2.13
CLK1-204ENST00000432425 ZCCHC11Q5TAX3 1644 aaKnown RBP1.77□□□□□ -2.13
CLK1-204ENST00000432425 TRAV30A0A087WSZ9 112 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 SMIM26A0A096LP01 95 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 TMED7-TICAM2A0A0A6YYA0 188 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 CIB4A0PJX0 185 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 TMEM218A2RU14 115 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 FAM183AA6NL82 134 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 A8MWP6 167 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 H7BYZ3 331 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 FFAR1O14842 300 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 RBFOX2O43251 390 aaKnown RBP eCLIP1.77□□□□□ -2.13
CLK1-204ENST00000432425 PGLYRP1O75594 196 aaPredicted RBP1.77□□□□□ -2.13
CLK1-204ENST00000432425 UPK1BO75841 260 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 OR2H2O95918 312 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 PTHP01270 115 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 TDGF1P13385 188 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 RAB3BP20337 219 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 VDAC2P45880 294 aaPredicted RBP1.77□□□□□ -2.13
CLK1-204ENST00000432425 ATP5G3P48201 142 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 NCBP2P52298 156 aaKnown RBP eCLIP1.77□□□□□ -2.138e-8■□□□□ 9.9
CLK1-204ENST00000432425 SLC18A1P54219 525 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 SNRPD2P62316 118 aaKnown RBP1.77□□□□□ -2.13
CLK1-204ENST00000432425 RPS24P62847 133 aaKnown RBP1.77□□□□□ -2.13
CLK1-204ENST00000432425 HLA-DRB3P79483 266 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 TMEM267Q0VDI3 215 aaPredicted RBP1.77□□□□□ -2.13
CLK1-204ENST00000432425 DHRS2Q13268 280 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 EBPQ15125 230 aaKnown RBP1.77□□□□□ -2.13
CLK1-204ENST00000432425 SSX1Q16384 188 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 C12orf74Q32Q52 190 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 MORN2Q502X0 79 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 LRRC10Q5BKY1 277 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 CENPWQ5EE01 88 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 PABPC1L2AQ5JQF8 200 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 TMEM69Q5SWH9 247 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 FAM222AQ5U5X8 452 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 ANKRD22Q5VYY1 191 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 TMEM236Q5W0B7 351 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 GLIPR1L1Q6UWM5 242 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 CLEC20AQ6ZU45 233 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 ATP5L2Q7Z4Y8 100 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 FAM19A3Q7Z5A8 133 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 CROCCP2Q86T23 111 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 ANKRD29Q8N6D5 301 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 LINC00337Q8N6G1 96 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 ACBD7Q8N6N7 88 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 TMEM229BQ8NBD8 167 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 LY6G5BQ8NDX9 201 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 OR10J6PQ8NGY7 276 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 OR2G3Q8NGZ4 309 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 OR10G6Q8NH81 332 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 OR1L1Q8NH94 360 aa1.77□□□□□ -2.13
CLK1-204ENST00000432425 NAT14Q8WUY8 206 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms